Micropterus salmoides (largemouth bass): 119883412
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Entry
119883412 CDS
T07309
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119883412
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
DSCAM family
119883412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
119883412
NCBI-ProteinID:
XP_038549970
LinkDB
All DBs
Position
Unknown
AA seq
2094 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRLTFSSSVGVSLPCPAGGAPHAILRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
HSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNIIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFIVSWYRNTEPVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVASFSERVVV
LGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRASQYTLSDGSTVSHVNVSSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQQFITQTVYVTVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNCSVDGYPPP
KVMWKHAKGTLAGIGNPQQYHPVPLTGRIQIVSNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDSWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNSIGKSEASKELTISTEEAQPDGPPMDVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTTKEQVELRGLEKFTNYSIQVLAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEANPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPISAVTLEFRPKGTWAWQNVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGSPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRAYHTQGRHVTMDSKQQGLSMGHSGLSNLTSSGASSGA
AGGGGSGSGGASICSSSSTLPQRTLTMPGSSASVAQSAAAAAAATAAAAGASSSSGGGGV
AGATGGTPGGASSSSSKMGGSRDSLLESSSSGLGRLQKQRDGGAGAYSKSYTLV
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacgcggctgtactttgtgaacgcctccctgcagcggctgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgcaccccatgccatcctgcgctggtac
ctggccgccggagacgacatttacgacgtgccccatatacgccatgtgcatgccaatggc
acgctccagctctaccccttctccccctccgcctataacagcattatccacgacaacgag
tacttctgcactgctgagaaccaagcaggcaagattcgtagccccagcatccacatcaaa
gcagtgttcagggagccctacacagtccgtgtggccgaccagcgctccatgcggggtaat
gtcgccgtgttcaagtgcctcatcccctcagctgtccaggagtacgtcagcgttgtgtcc
tgggagaaagacaccgtctccatcgttccaggtaaccgtttcttcctgacctcatttggc
gctctgtacatctcagaagtgcagaaggaagatgctctgtccacctaccgctgcatcaca
aagcataagtacagtggagagactcgccagagcaatggagccaggctctctgttatggac
cctacggagtccaccccgtcagtgctggacagtttccagtccggtgaggtgcaggtgggg
cacagtgttgagctgccctgcatcgcatcaggatatccaaaccccaccattcgatggcta
aaggatggtcggccattaccggcagactcccgctggacgcgacgcatcactgggcttacc
atttccgacttgaggctcgaggatagtggaaactacatttgtgaggtcaccaacagtttt
ggctccaaagaggtgacaggtcacctcaacatcatagagccactgcgggtcaccttgtct
cccaagaacctgaagacgggaatcagcagtacagtcatcctatcctgtgccgtccagggt
tccccccactttattgtttcctggtaccgtaacacagaacctgtcctgcccgatcagcac
ttttccatccagggggctcacaatgagacattgttcatttctgcagcacaaaagagacac
tcaggagcttaccagtgctttgccacgcgcaagggccagactgcccaggacttctccata
atactgctggaagatggtacaccccgtattgttgcctccttcagcgaaagggtggtggtc
ctgggtgaaccgttttccctgatgtgcgccgccaaaggagcgcctccacccaccatcacc
tggaccctggacgacgagcctgtggcccgggacctgtcacgtgtcagagccagccaatac
acactgtccgatggcagcacagtgagccatgtcaacgtcagcagcccgcagattcgcgat
ggaggagtgtatcggtgcgccgcacgaaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggtcctccgaggattcggcctatgaagaacataactgcagtggcagga
agaaacactttcataaactgccgtgtgattgggtacccttattactcaatcaactggtac
aaggaggggcttctgctgcctgacaaccatcgccaggtggtgtatgagaatggcactctg
aagctcagcgatgttcagaaggggatggacgagggggcatatgtctgcagtgtgctcatc
caaccgcagcagttcatcacgcagactgtctatgttactgtcaaagttcctccactgatt
cagccctttgactttccaccgacttccatcgggaaattgatgtacatcgcctgcgtggtg
tcatctggagacatgcccatacgtatcacgtggcggaaggacgggcaggagatcgtgccc
tcatcgggaatcaccatcgacacaaaggagtttatgagctccctccagatatccaaagtg
tcgctcaaacacaatggcaactacacctgcattgccagcaatgatgctgccactgtcagc
acagagaggcagctcactgttacagtgcctcctcgatttgtggttcagcccaacaaccag
gatgggatctatgggaaagcaggaatcctaaattgttcagtagatggataccctcctccc
aaggtcatgtggaagcatgccaaaggtacactagcgggtattgggaatccacagcaatac
caccctgtgcctctgactggccgtatccagattgtgagtaacggatctctactcatcaga
catgtcctggaagaagatcgtggcttctacctatgtcaagcctccaatggtgtgggctca
gacatcagcaagagcatggtcctcactgtcaagatcccagcaatgatcaccagtcacccc
aacactaccatggcaaagaagggccacgtgaaggagctgaactgcacagccaggggagaa
tggcccatcatcatccgctgggagcgaggggacacggtcattgaccctgaccgcaacccc
cggtactccattaccacaagtcccaatgagaagacagacgaggtgttgtctacactcaag
ctaaagccagcggagcgtgaggattcagtgttcttctcttgtcatgccatcaactcttac
ggagaaggacgaggcttgatccagctcactgtgcaagagcctccagaccctccagagttg
gaggtgcgagaagtgaaagatcgcagtatgaacctccggtggacacagagatttgacgga
aacagcgtcattacctcttacgatattgagtataagaacaagacagattcatgggagctg
aagcatgccacacgaaacatctcccccacaaacaatcaggccaacatagtagaccttcac
cctgcctctgtctacagcatccgcatgtactcctacaactctataggcaagagtgaggcc
agtaaggaactcaccatcagcacagaggaagcacagcctgatggtcctcccatggatgtg
atcctacaaccagtgacctctcagagtatcagggtcacctggaaggctcccaggaaggag
ctgcagaatggggtgatccggggttaccagatcggttacagagagaacggcccaggcagt
aacggccagtacagcattgtggaaatgaaggccactggagacagtgaggtctacaccctg
gataatctgaagaagtttgcccagtatggtgtggttgtccaggccttcaacagagctgga
acagggccctctagctcagagatcaatgctacaacactggaagatgtgcctagtcagcct
cctcagaatgtgcgagccatctctgtgacatcagacgaggcagtcatcacatgggctgag
cctcccaggatgacactgcatggtgtattgaagggatatcgcgtcgtgttctgggccgtt
tttccggacggagaatggggtgaaatgcaaaacatcacgaccaccaaggagcaggtggag
ctcagagggctggaaaagttcaccaactacagcatccaggtgctggcctacacccaggct
ggagacggggtccgtagcaacgtcctgtatatccaaacccgtgaagattaccccggaccc
ccagctggcatcaaagctgtgccctcctccgccagcagtgtcgtggtgtcctggttaccc
cctcacaagccaaatggaatcatccgcaagtacaccatctactgctccagccctgggtca
ggccaaccgctgcccagcgagtatgaagccaatccagagctgctgttctaccgaatcact
cacctcaaccacaggcagcagtacttgatctgggctgcagctgttaccactgcaggccga
ggtaacttcagtgacaaggtcactgtggagccagcggccaaggcccctgctaagatcctg
tcatttgggggtacagtgaccactccttggatgaaggaggtgcgacttccctgtagctca
gtaggagaacctacacctactataaaatggaccaaagacagtgaggacacagccatccca
gtgtctctagatggacagcgtctcattctggccaatgggacactggtgctgcgctctgtc
aaagctgaagattctggttactacacctgcacggccactaacacgctgggctttgacact
atcatagttaaccttttagtacaagtccctccagaccagccccgtctaaccgtctccacc
acctccacctcctccatcactctggcgtggataccaggagacaacggaggcagctctatc
agaggttttgttctgcagtactctgtggacaacacagaggaatggaaagatgttttcatc
agttctagtgagcgctccttcaaattggataacctgcgttgtggcacctggtataaagtt
aagctggctgcaaagaacagtgttggagccggacgcatcagtgagatcattgaggcaaag
acccacggacgagaaccccagttcaacaaagatcagccggtctttacccatattaactcc
agccacgcccgcctcaacctgcagggttgggccagtggaggctgtccaatcagcgctgtc
acactggagtttagaccaaaagggacatgggcatggcagaatgtccgtaccaatgccacc
acagatgtgttcctggcagagctgcgtgaggcaacctggtatgagttgaagatgaaagcc
tgtaacagcgctggctgtggaaaccagagctcccaatttgcaacactggactatgatggc
agcacaattccaccaatcaaatcccccctggaaaagaatgacgatgtcaagaagctgttt
tctattggctctcctgtgatcttagtcactctgggtgttgcgctgctcttcatcattcgc
aagaaacgcaaggaaaagagactgaagagactaagagatgccaaaagcctggcagagatg
ctgatcagtaaaaacaaccgcagctttgacaccccagtgaagggacctcctcagggccca
cgattacacattgacatacccagagtgcagctgctaattgaggacaaagaaggcatcaag
caaatcggtgaggataaagccactatccctgtgacagacacagagttcaaccaaactggg
aaccctcagagcttttgcacaggtgtgtctgtccatcaccctgccctcatccagaacacc
ggccctttgattgacatgtcagacatcagaccaggaaccaacccagtgtcaaggaagagt
gttaaatcagcacatagcatcaggaaccgctactccagtcagtggactctgaccaagtgc
caggcctccacgccagcccgtactctcacctcagactggcgcacagttggctcccagcat
ggcatcactgtcacagagagtgacagctacagtgccagcctctcacaggacacagataaa
ggtcgcaacagcatggtgtcgacagagagcgcctcctccacctacgaggagttggcaaga
gcatatgagcatgccaagctagaggaacacctgcagcatgccaaatttgagattactgag
tgctttatttctgacagctcatctgatcagatgaccacaggtaccaatgacaatgcagac
agcatgacgtccatgagcacaccgtcagagcccggtatctgccgtttcactgcctcgcca
cccaagccccaggactatgatcgtggcaagaatgtagctgtgcccattccacaccgcgcc
aagagtgactactgcaacctacccctctacatgaagtcagatcccttcttccgaaagcag
tcggagcatcatgacccatgtccagtggttccaccacgtgaagcctctattcgtggcctg
gcccagcgggcataccatacccagggccgtcatgtgactatggactcaaagcagcagggc
ctaagtatgggccactctggcctgtccaacctcacttcctctggggcttcctcaggagca
gcaggaggcggtgggagtgggagtggaggggcgtctatttgctctagcagctccacactt
ccccagaggactctcaccatgcccggctcctctgcctcagtggcccagagtgcagcggca
gctgctgcagctacagctgcggctgctggggcatcatcatcctccggtggaggtggggta
gctggggccacaggagggactcctggaggtgcctcctcatcctcctccaagatgggagga
tccagagactctctcctggagagcagctcctcgggtttaggcagactacagaagcagagg
gatggaggggcaggggcctactccaagtcatacacactggtgtag
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integrated database retrieval system
