Micropterus salmoides (largemouth bass): 119883423
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Entry
119883423 CDS
T07309
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119883423 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119883423 (smarca4a)
03036 Chromosome and associated proteins [BR:
msam03036
]
119883423 (smarca4a)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119883423 (smarca4a)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119883423 (smarca4a)
Chromatin remodeling factors
BAF complex
119883423 (smarca4a)
PBAF complex
119883423 (smarca4a)
GBAF(ncBAF) complex
119883423 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
119883423
NCBI-ProteinID:
XP_038549994
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMLGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYGQMKGMGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPSGPGAGPMEGSGDPNQGMGQPNRGGPQGPGG
PGGAGGGPGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQQPM
PNMPTSTGPGVGPGAAPGPAQANYNRPHGMVGPNMVPPGPAGVPPGMQGQPTNGPPKSWS
EGPMVNAAAPANPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQLPPMMLH
QKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKA
LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER
KRRQKHQEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIEKER
MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKKK
KKPEPVEGGAPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVEAPKAGQLEAWLEMN
PGYEVAPRSDSEDSGSEEEEEEEEDEEEQPHPSSAPAEEKKKIPDPDSEEVSEVDVQHII
EHAKQDVDDEYGNAAFNRGLQSYYAVAHAVTEKVDKQSSLLVNGQLKQYQIKGLEWLVSL
YNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAPS
VVKVSYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKN
HHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA
MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY
RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGYSGG
IVSGPDLYRSSGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDG
TTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQD
RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGYERRAFLQ
AILEHEEQDEVGARGGCRSRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRREEA
RNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQW
LKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDIGPATPSSSSGRGREKDEEVKKAKKRGR
PPAEKLSPNPLSLTKKMKKIVDAVIKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPV
DFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE
KEDESEGEESEEEEEEPDEGSESESRSVKVKIKLSRKEKGDRGGKGQRRRGRGARAKPVV
SDDDSEEEQEEEHSASGSEDD
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgaccccccgatgggagggacacctcggcccggaccctccccgggccca
gggccatctccgggaggcatgctgggcccgagcccaggcccctctccaggctcagcccac
agcatgatggggcccagcccaggaccccctggatctggacacccccaccctccacaggga
ccgtcaggatatcctcaggacaacatgcaccagatgcacaaacccatggaagccatgcat
gagaagggaatgcccgatgacccccgctatggacagatgaagggcatgggcatgagacca
ggggggcacagtggaatgggaccccctccaagtcccatggaccaacattcccaaggttac
ccctctccattgggtggctcggagcacgcacctagccctgtcccagccaacggccctcct
tctggacctatgatgcccggaggtccctctggccctggggctggccctatggagggcagc
ggggaccctaaccagggaatgggtcaacctaatcgtgggggtccccagggtccaggtgga
cccggtggtgcgggaggtggacctggtggacccactcctttcaaccagaaccaattgcac
caactcagggctcagattatggcctacaagatgctggcacgcagtcagccgttaccagag
cacctgcagatggctgtgcaggggaagaggcccatgccagggatgcagcaacagccgatg
cccaacatgccgacttctacagggcctggagttggccctggagctgctccgggaccagct
caggccaactacaacagaccacatggcatggtaggtcccaacatggtgcctcctggacct
gcaggagtacccccaggtatgcaaggccagcctaccaacggaccccctaaatcatggtct
gaaggaccaatggtgaatgctgctgccccagccaatcctcctcagaagctgattccacct
cagcccactggcagaccctctcctgctcctccctctgttccccccgctgcctccccagta
atgcccccccagacacagtccccaggacagcctgcccagctccctcccatgatgcttcac
cagaagcagaaccgcataacacccatccaaaaacctcgtgggctggacccagtggagatc
ctccaggagagagagtacaggctacaggcccgtattgctcaccgtatccaggagttggag
aacctgcctggttctctagctggtgatctgcgcaccaaggccaccatcgagctcaaggcc
ctgaggctgcttaacttccagagacagctgcgtcaggaggtggtggtttgcatgcgtcgt
gacactgctttagaaactgccctcaacgctaaggcctacaagcgcagcaaacggcagtct
ttacgtgaggcccgcatcacagagaagctcgagaaacagcagaagatcgaacaggagcgg
aaacgtcgccagaaacaccaggaatacctcaacagcatcctgcagcacgccaaggacttt
aaggagtaccatcgctccatcacagcgaagctccagaaggccaccaaagctgtcgccacg
tatcatgccaacactgagcgcgaacagaagaaagagaatgagcgcattgaaaaggagaga
atgcggaggttgatggctgaagatgaagaaggctatcgtaaacttattgaccaaaagaaa
gacaagcgtctggcctacctgctgcagcagacagacgagtacgtggccaacctcactgag
ctggtgcgagcccacaaagccgtacaagctctcaaggagaagaaaaagaagaagaaaaag
aagaagccagagcctgtggagggtggtgctcctgccctggggcctgatggagagccttta
gatgagaccagtcaaatgagtgacctaccggtgaaggtcatccatgtggacagtggaaag
atcctgactggggttgaagcacctaaggcgggccaactggaggcctggcttgaaatgaac
ccaggatatgaagtagcgcctcgctcagacagtgaagacagtggttcagaagaggaggag
gaggaggaggaggatgaagaggagcagcctcacccctcgtcagctccagcagaggagaag
aagaagattcctgaccctgacagtgaagaagtatctgaagtggacgtccagcacatcatt
gaacacgccaagcaggatgtagatgatgagtacggtaatgcagctttcaaccgaggcctc
cagtcctactacgctgtggctcatgctgtcactgagaaagtggacaaacagtcctcgctg
ctggtcaatgggcagctcaagcaataccagatcaaaggtttggagtggctggtgtcgctt
tacaacaacaacttgaatggcatcctggctgatgagatgggtctaggaaaaacgatccag
accattgcactcattacttacctcatggagtacaagcgcctcaatgggcccttcctcatc
attgtacctctctctactctatcaaactgggtgtatgagtttgataagtgggccccatct
gtagtcaaagtctcctacaaggggtctccagctgctcgtcgtgcattcgttcccatcttg
cgcagtggcaagttcaatgtgctgctcaccacgtacgagtacattattaaagataagcaa
gtgctagcaaagcttcgttggaagtacatgattgtggacgagggccatcgtatgaagaac
caccactgtaaactgacccaggtcttaaacacacactacttggccccacggcgtctgctg
cttacaggcactccgctgcagaataagctacctgagctctgggcactgctgaacttcctc
ctgcccaccattttcaagagctgcagtacatttgaacagtggttcaatgccccctttgcc
atgactggagaaaaggttgacctgaatgaagaagagaccattctgatcattcgacgttta
cacaaggtgctcaggcctttcttgctgcgccggctcaagaaagaagtcgaggcccagctg
cctgagaaggtggagtatgtcataaaatgcgacatgtcagccctacagagggttttgtac
agacacatgcaggccaagggagtcttgctcacagatggctcagaaaaagacaagaagggt
aaaggtggcacgaagaccctgatgaacactatcatgcaactgagaaagatttgcaaccac
ccctacatgttccagcacattgaggagtcgttctctgagcatcttggttattctggtgga
attgtgagcggccctgacctgtaccgctcctctgggaagtttgaactgctggatcgcatc
ctgcccaagctgagggccaccaaccacaaagtgctgcttttctgtcaaatgacctcactc
atgaccatcatggaggactactttgcctaccgtaacttcaagtaccttcgtctggatgga
accaccaaggcagaggaccgtggcatgctgctgaagacattcaatgacccggcctctgag
tactttgtgttcctgctcagcaccagggcaggaggcctgggcctcaacctgcagtctgct
gacacagtcatcatctttgacagtgactggaatccacaccaggacttgcaggcccaggac
agagcccatcgaattggtcagcagaacgaggtgcgcgtgctccgcctctgcaccgtcaac
agcgtggaggaaaagatcctggcagcggcgaagtacaaactgaacgtggaccagaaggtc
atccaggctggcatgttcgaccagaagtcttcaggctatgaacgtcgggcctttttacag
gccattctggagcacgaggaacaggacgaggtcggggctcgaggaggctgccgctctagg
ggggcgtgggaggaagacgaggtgcccgatgatgagactgtcaaccaaatgatcgccaga
agtgaagaggagtttgaacagttcatgcgcatggatctagacagacgccgcgaggaggcc
cgcaaccctaagaggaaaccccgtctgatggaggaggacgatatgcccagctggattttg
aaagatgacgctgaggtggagaggctaacttgtgaagaggaggaggagaagatgtttggc
agaggatcccgccaacgtaaggaagtggactacagcgactcactcactgagaaacaatgg
ctcaaggccatagaagagggaaatctagaggatatcgaggaggaagtgcgccacaaaaag
acaaccagaaagcgcaagcgagaccgcgaccatgacatcggcccggccacgcccagctcc
agcagcggccgagggagggagaaagacgaggaggtgaagaaagcaaagaagcgtggtcgt
ccgcctgctgagaagctctctcccaaccctctttccctcactaagaagatgaagaagatc
gtggatgctgtcatcaaatataaggatggcagtaatgggcggcagctgagcgaagtcttc
atccagctgccttctcgcaaggagttgcctgagtactatgagctcatccgcaaaccagtg
gacttcagaaagatcaaggagaggatccgcagccataagtaccggagcctgaacgaccta
gagaaggatgtgatgctgctttgtcaaaatgcccagactttcaacctggaggggtctctg
atctatgaggactccatcgtgctgcagtccgtcttcaccagtgtgagacagaagatcgag
aaggaggacgagagtgaaggagaggaaagtgaggaagaggaggaggagccagatgaaggc
tcggagtctgaatctcgttcggtgaaggtgaagattaagctgagccggaaagagaaaggg
gatcgtggaggaaaaggacaacgacggaggggccgtggtgcccgggcaaaacctgtggtg
agcgacgacgacagtgaggaggaacaggaagaggagcattcagctagtggcagcgaggac
gactga
DBGET
integrated database retrieval system
