Micropterus salmoides (largemouth bass): 119883479
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Entry
119883479 CDS
T07309
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
msam04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
119883479 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119883479 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119883479 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119883479 (ncam1b)
04090 CD molecules [BR:
msam04090
]
119883479 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119883479 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
msam00537
]
119883479 (ncam1b)
04091 Lectins [BR:
msam04091
]
119883479 (ncam1b)
Membrane trafficking [BR:
msam04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
119883479 (ncam1b)
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
NCAM1/2
119883479 (ncam1b)
CD molecules [BR:
msam04090
]
Proteins
119883479 (ncam1b)
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
119883479 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
msam00537
]
Others
119883479 (ncam1b)
Lectins [BR:
msam04091
]
I-type lectins (Siglecs)
119883479 (ncam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_DSCAM-DSCAML_C
V-set
V-set_CD47
Pur_ac_phosph_N
C1-set
C2-set_2
Adeno_E3_CR1
C2-set_3
DUF4959
Motif
Other DBs
NCBI-GeneID:
119883479
NCBI-ProteinID:
XP_038550058
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MVQSGDIFLALLLVGCTVSLEVQITPSQGEISLGESKFFMCEVVGVARQIDWFGPSGERI
EPNRPDITVTRNDESSSILTLYKAGTENAGMYKCVATNGDQQGESTVKVKIFQRITFTSA
PSPQEFTEGDNANIVCDVVSSPPPTVLWKYKGAKIQMEKDVRFKVLSNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLRVIKVVVNVLPTIRVWQSEVNATADVGQPATLTCAVDGYPEP
MVTWTRNEVVLEAGEKYSFNEDGSEMTLLEVTKLDEGEYTCIAKNKAGESEQELSLRVFV
KPKITYIVNQSTSEMEEQVTLTCEASGDPTPTINWSYGERVFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYVKYSDAGQYVCTARSAIGEDDQSAYLEVRYAPKI
HGAVAVYTWEGNAVNISCEVVAHPSDVSIEWLRDGLQLPNSNTTNIKIFRTPSFSYLQIT
PEYENDFGSYNCTASNEMGTESKEFLLIQAEVPSPPSISEVRPFSTTAQIQFEEPESTGG
VPVLKYRVEWRTRGKGSWVQRVHYGSISEVTITGLKPETSYEVKLSAINGKGEGESSPAE
FFKTEPVRNPNPPKLEGALQPKGNSLKVSWIKQDDGGSPILHYLIRYKPLEAPDWKPEIR
MPSGSEYVVLSGLEWDTEYNVYVVAENQKGKSPPATMSFRTSTEPDAIPDLGDEAALSMG
IMLWAGILVVAFVLLLLAVDVTCYFVNKCGLIMCLCGKSGTGTKGHNLEEGKAAFMKDES
KEPIVEVKTEDECTANHNAAGPTEPNETTPLTEPELAAFTAALALDTLSSIATNSDTATA
TIDPAQDSPSSETTTLTCSLSTPANDPSEPSPTLVPAPTPESNTAPPTPLITTSAVEAKM
APLVEQRGSNPPEEQEKITTPPCTPEWTKAQKSGTPIPPKRRHSPKLAALNAKGSPPVSP
LAASSSSSSPTLDTKKPAPKPPVSKLPIQPHTVALDTETPAQTAPPKPDPDSNTTAPDPC
GFSLTAFDTNNKPADQTFDSNTPTAKDAATSSPSVIHGALKVLDAEESAPLVADVPTPLP
VKDISSTPAPTGLEAPVSNDLLTSASDTYDFLTPNVGPKIANLEFELTNGTEIPSLPPAD
LISLESPPSAPSLTNGDGADLPPSGPVLEASETLAKTAPVNDEKIFSDEKGKLEEAEFSN
TLTAIAAEHNSVIQTNTTESKA
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggtccagtcaggggatatttttctagccttgcttcttgtgggctgtacagtttcactg
gaagtgcagatcacaccaagccagggtgagattagccttggagagtccaaattcttcatg
tgtgaagttgtaggtgttgccaggcagatagactggtttggaccaagtggggagaggata
gaaccgaacagaccagacataacagtaacccgtaatgatgagtcatcttccatcctcaca
ctgtataaagctgggactgaaaatgcagggatgtacaagtgtgttgctaccaatggagac
cagcaaggggagtcaactgtcaaagtgaagatcttccaaagaatcaccttcacaagtgca
ccctcaccacaagagtttactgaaggagacaatgccaacattgtttgtgatgtcgtcagt
tcgcctccacccacagtcctctggaaatataaaggagcaaaaatacagatggaaaaagat
gttcgttttaaagtactgagcaacaatcaccttcaaatccgtggcataaagaagacagat
gagggctcatatacctgcgagggtcgcctcatggcccgcggcgagattgatctgcgggtc
atcaaggtcgttgtgaatgtactcccgaccattagggtatggcagtcagaggtgaatgcc
acagcagatgttgggcagccggccacgttgacttgtgctgttgatggctatcccgaaccc
atggtgacctggacaaggaatgaagtagttctcgaggcaggagagaagtacagctttaat
gaagacggctcagaaatgacattattggaagttaccaagctggacgaaggagagtacacc
tgcattgcaaagaacaaggctggtgaaagtgagcaggaactcagtctgagagtgtttgtt
aaacctaagatcacatacatcgtaaaccagagcacctcagagatggaggagcaggtaact
ctgacttgcgaggcatctggagatccaactcccaccatcaactggagctacggtgagcgc
gtcttcactgaaggagagcaggcacatctaaacaggatctatcaggcatcatggactcgg
cccgagcaacacaagagtctggatggaaatgtagtggtgaggagtgatgctcgtgtgtcc
tccctcactctgaaatatgtcaagtattcagacgctggtcagtacgtctgcacagcacgc
agtgccattggagaggatgatcagtcggcatatctggaggtccgctatgcccctaagatc
cacggtgcagtggcagtgtacacctgggagggaaatgctgtcaatatcagctgtgaggtc
gtggctcatcccagtgatgtctctattgagtggctgagagatggactgcagctccccaac
tcaaacaccaccaacattaagatattcagaactccatcattcagctaccttcagataacc
cccgagtatgaaaatgactttgggagctataactgcactgcttcaaatgagatgggtaca
gagtcgaaggagttcctcctcattcaggccgaggtgccatcacctccatccatcagtgag
gtgaggcccttctccaccacagcacagatccagtttgaggagcccgaatctactggaggt
gttcctgtattgaaatacagagtggagtggaggacccggggcaaaggcagctgggtgcag
agggtccattatggctccatcagtgaggtgactatcacaggcctgaagccagagaccagc
tacgaagtgaagttgtcagccatcaacggcaagggtgaaggtgaaagcagcccagctgag
tttttcaagacggagcctgtccggaatcccaatcctcctaaactcgaaggggcacttcaa
cccaaaggcaactccctcaaagtcagctggatcaagcaggacgatggcggctcgcccatt
ttacattacctcatccgctataaaccactagaggcaccagattggaaaccagaaatccgg
atgcccagcggcagcgagtatgtggttctcagtgggttggagtgggacacagaatacaat
gtctatgtggtggcagagaatcagaagggcaagtccccgccagcaaccatgtccttcagg
acgtccacagagccagatgccatcccagatttgggtgatgaggcagcgctctccatgggc
atcatgctctgggcagggattcttgtagtagcatttgtactcctgctgctggctgtggat
gtcacctgttactttgtcaacaaatgtggcctcatcatgtgcctctgtggcaaatcaggc
acagggaccaaaggacacaacttggaggagggcaaggcagccttcatgaaagatgagtcc
aaagagccaatagtggaagtcaaaacagaggatgagtgcacagccaaccataacgcagca
gggccgacagaacccaatgaaaccacacctctcacagagccagagctggcggctttcact
gctgctctggcactggacacgctctcctccatagccaccaactctgacacagccactgca
acaattgaccctgctcaggacagcccctctagcgagaccactaccctcacttgtagcctg
tctacccctgccaatgacccctcagagccctcacctacccttgttccggctccgactcca
gagtcgaacaccgccccaccgactcccctcatcaccacctctgccgtcgaagctaaaatg
gccccattagtagaacaaagaggaagtaaccccccagaagaacaggagaaaataaccact
cctccatgtacccctgaatggactaaagctcaaaaatccgggacaccgataccaccaaag
cgcagacactctcctaaactcgccgctctgaatgctaaaggtagcccccccgtatctccc
ctggctgcgtcttcctcatcgtcctctcccactctcgacaccaagaaacctgcaccgaag
ccaccagtcagcaagcttcctatacagccacacactgtagccttagacaccgagactcca
gcacaaactgcccctccaaaaccagaccctgattcaaatacaacggccccagatccctgc
gggtttagccttactgcctttgacactaataataaacctgctgaccaaacttttgatagt
aacactcccactgccaaagatgctgcaaccagctctccttccgtgatccacggggctctt
aaagtcctggatgctgaagaatctgctcctctagttgcagatgtcccaacccctctacct
gttaaagatatttcttctactcctgcccccactggtcttgaggcaccagtctcaaatgat
ctcctcacatcggcgtccgacacgtatgattttctaacccccaacgtggggcccaaaatt
gcaaatttagagttcgagctgacaaacgggacagaaataccctccctgccacccgcagac
cttattagcttagagagtccgccctctgccccctctctgaccaatggagatggagcagac
ctccccccctcaggcccagttctggaggcatcagagactctggccaagactgctcctgtc
aacgatgagaagattttttctgatgagaaagggaagctggaagaggcagaattttcaaac
accctgacggcaatcgctgcagaacacaacagtgtcatacagacaaataccaccgagagc
aaagcatga
DBGET
integrated database retrieval system
