Micropterus salmoides (largemouth bass): 119883480
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Entry
119883480 CDS
T07309
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119883480 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119883480 (lrfn1)
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
SALM family
119883480 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119883480 (lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
LRR_5
Ig_2
fn3
ig
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
Sp38
DUF4834
Motif
Other DBs
NCBI-GeneID:
119883480
NCBI-ProteinID:
XP_038550067
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MDRLVVCVLLCAALVKGYSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITIIRRKDFFNMTSLVHLTLSRNTISQITPHAFVGLRSLRALHMDGNRLSVIKSDHFK
GLINLRHLILGNNQIHHVAPTSFDEFVATIEDLDLSNNNLRGLPWEAIARMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICDPPLITKHLSTKPFV
MEGQGVTLKCKAVGDPDPEIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEINMIPLPLFVNNTGHMREDPGLSDITTSSKSGNDTKGYDKQDRRVMV
TELTSSSAVIRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSSPEDSKTKVSSSMHSQTNGSQQRLQRSASKQPSDEGQREALVPKECL
ALVLKVDNEKREDPAATTAILEVELPPLTVDKMKRRTSLDAQRSGPPSDDTQTDSSLTGS
TMSLCLIGSNAGTKEAPRLKDKKSALANMGLLPNELARTRHRFSFDGGDYSIFQSHSYPR
RARTRWHKSTNQLNMESSPLANRRVTFSSTEWMLESTV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctggttgtgtgcgtgctgctgtgtgcagctctggtgaagggatacagctgc
ccgggccgctgcatctgccagcacctctctcccactctgactctgctctgtgctaagact
ggtctgttgtttgtacccccaaccatagaccgcaagaccgtcgagctgcgacttactgac
aacttcatcacaatcatccgcaggaaagactttttcaacatgactagtttggtccacctc
accttgtcccgtaataccatcagccagatcaccccccatgcctttgtcggcctgcgatct
ttgcgggcgctccacatggatggaaaccgtctcagtgtgattaagagtgaccactttaaa
ggcctcatcaacctgcgtcacctcatcctaggaaacaaccagatccaccatgtggccccc
acctccttcgatgagtttgttgccaccatagaggacttagatctttctaataacaacctg
cgtggccttccctgggaagccatagccagaatgaccaacattaacacactcacactggac
cacaacctgattgatcacattggagcagggacttttacgctgctcaccaagctggtccgc
ctggacatgacctctaacaggctgcagaagctgccaccagacagcctgttccagcatgca
caggtcctgtctgatgccaagggctccagctcctccactctggctgtgagctttggtgga
aaccctcttcactgtaactgtgagctgctgtggcttcgcaggctgacaagagaggatgat
ctggagacctgtgcttcgccagagcacctcatggataagtatttctggtccatccaagag
gaggagtttatctgtgaccctccgctgatcaccaaacatctttccactaagccctttgtg
atggaagggcagggtgtgactcttaaatgcaaagccgtgggtgatccagacccagagatt
cactggcggtcaccagacggcaagctggtgcataataactcccgcaccatcctgtatgat
aatggcaccctcgatattctcatcaccacgctgaaggacagcggggcatttaattgtgtg
gcgtccaatgccgcaggcattgccacagctgctgttgaaatcaacatgatccccttaccc
ttgtttgttaacaacacaggccacatgcgcgaggaccccggcctctcagacatcaccacc
tcctccaaatctggcaatgacaccaagggctacgacaagcaggacaggagggtgatggtc
accgagctgacctcctcctccgctgtgatccgttggccatctgagcgccacatccccggg
atcaggatgtaccagattcagtacaacagcacggcagatgatactttggtgtacagaatg
atcccatctaccagcaagaacttcttaatcaatgatctggccgcaggacgggagtatgac
ctttgtgtgctggcggtttacgacgacggcatcacatcattaacggccacacgtgtggtt
ggctgtgtgcagttccacacggccagtgaggtcagccagtgtcgcttcatgcacagccag
ttcctgggaggcactatgatcatcattattggtggtataattgttgcttctgtcctggtt
ttcataatcatcctgatgatccgttacaaggcctacagcagcccagaggacagcaagacc
aaggtcagctccagcatgcactcccagaccaatggcagccagcagcggctccagcgctct
gcctccaagcagccctctgacgaaggccagcgtgaagccctggtgcccaaagagtgcttg
gcgctggtgctgaaggtagacaatgagaagagggaggatccagcagccaccactgccatc
cttgaggtagagctgcctcccctgactgtagacaagatgaagagaaggacaagcctggat
gcacagcgttctggacccccatctgacgacacgcagactgacagtagcctgacgggctcc
accatgtccctttgtctcataggctccaatgctggcaccaaggaggcacccaggctcaag
gacaagaaaagtgccttggccaacatgggattgctccccaatgagctggcacgaactagg
cacagattttcttttgacggaggggattactccatttttcagagtcatagttacccacgc
agagcgaggacgaggtggcacaagtccaccaaccagctcaacatggagtcatcgccgctc
gccaacaggagagtcacgttcagtagcactgagtggatgcttgagagcacagtctga
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integrated database retrieval system
