Micropterus salmoides (largemouth bass): 119883738
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Entry
119883738 CDS
T07309
Name
(RefSeq) oxygen-regulated protein 1-like
KO
K19538
retinitis pigmentosa 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119883738
04812 Cytoskeleton proteins [BR:
msam04812
]
119883738
Cilium and associated proteins [BR:
msam03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119883738
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
119883738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
119883738
NCBI-ProteinID:
XP_038550333
LinkDB
All DBs
Position
Unknown
AA seq
1633 aa
AA seq
DB search
MNEMGIRRVAHDQSTGSGHTFGTPRHPSIIDPILSKRVCFYKSGDPQFNGLRMVINNRTF
KTFDALLDSLSKKVPLPFGVRNITTPRGVHAIYTLDELEDGKSYICSDSRKVKPINLMLA
RKKLPPWYHTRPASSRRQTVQQARFFPGRNIHKKEAVFVRTPRRLLVFRNGDPTVKHSVA
LHKRTTPTFASILEYISELIQFHVVKLHTSDGRRVDGFPGLILCSGIVVAAGKEPFKPAN
YHAQISPAPTKLLTNRMGLRRLKALNRKKKSRSYTSKTRNFSPSSERYIVNRIHNSIAEG
SCDLPSDHTNSAELESGRVLESVAETEGDICLGDGAGGQDCTLPTEDDIEKSFRVNQDGS
MTVEMRVRLTVKEEETIHWTTTLTRSSLANQCNASHLSESVAEQEIVSLKSNSLDLQSPA
ISIDTINKDKTKDNNDEDPPSLGNGVFSESSNEEDNIKAQMDVVSPRRAPTPGHKQIRKK
QASMESINSVTADGIQEGMVGSYSYIEQTEDGAMTEQYCMVKQSSARPVPKPRRLCSVDA
NNINVRNVSTFKSAGMTEILQIESGEEVTETVLHIYEQQTCHDNFLANLCAQDMSASGVP
FCRPATSDTGHLSSNNDFEPELWRPSTASESISIWRAESISVTYEYVEKWLEKANLNPTT
YPDEESKTLETEAVTLVQTENGRCGESENKNGLMIVAKESNSLPDFSSHVVSTFGSSSKA
LLAFLSVMTLKEGITNINMEELNANNVSCAEALKMIDSLREIASIEDSHELKVSLSDLQR
SASKQLLQSWKGFQELSDKCKSRSSTRNDSQQELVTEVSPEKDCGIDENVIDEIMDNLDI
PEKLKDELASLSMGVKSDSDDKEKMSARISEDAKISHFSIEGAANVKDVTQDEKANADLS
SIIKKFTDINQPEQPSMGSITETAKDKTTDQATKEEDSQYGQNSAAKFRPAEPNDEQIPE
ERQLYSTVLSVNENAEVMKACMEVENQENQGEKKQQHGHNEDESNQEKANMNGVISSTTN
LEQDNCTSEVEKQDMKGNKLQMHSQGNMSILDKELPHDAESGSEQEEQDTSSANKDLEQK
VSIEQSVSSSEADEQLRSEEESEVECKEIQHGSRESDDLSNPESHSEEEEDKQPSSNNDI
ELNVRETERISSPYSQNKSLSEEEQPEAGCKELSNKDALSNPASPSNSEEELQSQGSCMR
LNASVDECTYISDVDEPFSEEEQPEAECNRLKVIIGESLSGSEEEQGTMEDEKHLDNLPD
HREQTCKALIEETEEDKSALSAQSAPQSSLSFSYDSSGVITSEPEGNRVRYIREMFLAKS
GTDVKPGQRCFPSPNTSELSKLRAETSASGGYQSQTSSELSSGEDDSARKSITKGFVRRT
IERLYGKKDANPDEEANERPPSAPKQKKKEHSSIFSPFHIAGSKAMSELSYFSSTNALDT
LSEATRCVAFNAQVGPEESVRWLLRENTLIRKSVSDPVGINKTFTSSPQGGAKCEDAEEN
ASSPPFSTKSDLEDNKSLSRKCTYFSLPHASDSDACQDDLSIVSKSGESITDPKDNSGDT
KMGADRNGSLPVVGITDFKMKDNKVHPLTEPPPDGEAVVVQPGKGQGVMNRRIQEPDMLD
LLYNFCGQNCPIL
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatggggattcggagggttgcccatgaccagtccacagggagtgggcacacc
tttggcaccccacgccacccaagtatcattgaccctatcctgtcaaagagggtctgcttc
tacaaaagtggagatcctcagttcaacggtctgcgcatggtcatcaacaaccgcaccttc
aaaacatttgatgcactcctggacagtctctctaaaaaggttcccttgccgtttggggtg
aggaacatcaccactcctcggggggttcatgcaatctatactttggatgaactggaggat
gggaaatcttacatctgctctgacagccgtaaggtaaaacctatcaacctgatgctggcc
aggaagaagctccccccctggtaccacaccaggcctgctagttcccgtcgtcagacagtg
cagcaggccaggtttttccctggccggaacatccacaagaaggaggcggtgtttgtacgc
acaccaaggaggctactggtttttcgcaatggtgaccccactgtaaaacacagtgtggcg
cttcacaagaggactacacccacttttgcgtccatcctggaatatatttcagagctcatc
cagtttcatgtggtgaaattacacacttctgatggcagacgtgtggatggttttccaggc
ttgatattgtgctctgggattgtagtggccgcaggcaaggagccattcaagcctgcaaac
taccatgcacagatatcaccagctccaacaaagctgctgaccaaccgaatgggcctcaga
agactaaaggctttaaaccgtaaaaagaagtcccgatcatatacttcaaagacaagaaat
ttctccccctcatccgagaggtatattgtgaatcggatccataactccatcgcagaaggt
tcgtgtgacctacccagtgaccacacaaactctgctgagttggaatcaggccgtgtactg
gagtcagtagcagaaacagagggcgacatctgccttggtgatggagcaggagggcaggac
tgcacgctgcccacagaggacgacattgagaagtcctttcgcgtgaaccaagatggtagc
atgacagtggagatgagggtgcggctgacagttaaggaggaggaaacaatccattggaca
accactctgacacgctcaagtttggccaatcagtgcaatgcaagccatttatcggagtct
gtggcagagcaggagatcgtctcactaaagtcaaactctctggatttacaaagtcctgct
atctccattgacaccatcaacaaggacaaaactaaggataacaacgacgaggatccacca
tcgcttggcaatggagtgttcagcgaaagtagtaatgaagaggataatatcaaagcacag
atggatgtggtgtcccccaggagagctcctacaccggggcacaagcaaattagaaaaaag
caagcctctatggagagcataaattcagtgacggcagatgggattcaggaagggatggtt
ggttcttactcgtacatagagcagacagaagatggagccatgacagagcagtactgcatg
gtcaaacagagtagcgctagaccagtgcccaaacctagaagactttgttctgtggatgcc
aacaatataaacgtcagaaatgtatccactttcaaatcagcagggatgactgaaattcta
cagattgaatctggagaggaggtcactgaaactgtcttacatatatatgaacagcagacc
tgccatgataacttccttgcaaacctttgtgcacaggatatgtctgcttctggggttccc
ttttgcaggccagctacctcagacactggacacctctcctccaataatgactttgaaccc
gagctctggagaccatcaacagcttctgagtcaattagcatctggagagctgagagcatc
tctgttacttatgaatatgtggaaaaatggctggagaaagccaatcttaaccccacaact
tacccagatgaggaaagcaaaactttagaaacagaggcagttactcttgtacaaacagaa
aatggcaggtgtggggagtctgaaaacaagaacggcttgatgattgtggcaaaggagtcc
aacagcctgcctgacttctcctctcatgtggtttctacgtttggctcatcatctaaagct
ctcctcgctttcctgtccgtcatgaccctaaaggaaggcataactaacataaacatggaa
gagctgaatgcaaacaatgtcagctgtgccgaggctttaaaaatgattgattctctcaga
gaaattgccagcattgaggattcccacgagctaaaagttagtttgtcagatttacagcgg
tcagcttcgaagcagctcctgcaaagctggaagggctttcaggaactcagcgacaaatgc
aagagtcgcagctcaacacgaaatgattcacagcaagaactcgtaaccgaagtgagtcct
gaaaaagactgtggcattgatgaaaatgtaattgatgagatcatggataatcttgacata
cctgagaagctcaaggacgaattggcctctctttcaatgggtgtcaaaagtgacagtgac
gataaagaaaagatgtctgccaggatcagtgaagatgccaagatatcccatttctccata
gagggtgctgctaatgtcaaagatgttactcaagatgagaaagctaatgctgatctgagt
tccatcattaaaaaattcacagacattaaccagccagaacaacccagcatgggtagtata
acagagacagcgaaggacaaaacaactgatcaggcaactaaagaagaggatagccaatat
gggcagaacagtgcggccaaatttcgaccagctgaacctaatgatgagcagataccagaa
gaaagacagctttacagtacagtactgtctgtaaatgagaacgcggaggttatgaaggca
tgtatggaggtagaaaatcaagaaaatcagggcgagaaaaaacagcagcacggccacaat
gaagacgaatccaaccaagaaaaggcaaacatgaatggcgtaatcagcagcacgacaaat
cttgaacaagacaattgtacctctgaggtagagaagcaagacatgaaaggcaataagctg
cagatgcacagtcaggggaacatgagtatccttgacaaggagctcccccatgatgctgag
tcaggttcagaacaggaagagcaggacacgtcaagtgccaataaagatttagagcagaaa
gtgagcattgagcaaagtgtgtctagctcggaagcagatgagcaacttagatcagaagag
gaatcagaagttgaatgtaaggagatacaacatgggagcagggagagtgatgatttgtcc
aaccctgaaagtcactctgaggaggaagaagacaagcaaccaagctccaataatgacata
gaactcaatgtaagagagacagaaagaatatccagcccatacagtcaaaacaagtctttg
tcagaggaagagcaaccagaggctggatgtaaggagctgagcaacaaagatgctttgtct
aaccctgcaagcccatctaactcagaggaggaactgcagagtcaaggaagctgtatgaga
ctgaatgccagtgttgatgaatgcacatatatctcagatgttgatgagccattttcagag
gaagagcaacctgaggctgaatgtaacagactaaaggtcatcattggggaaagtttgtct
ggcagtgaggaagagcaggggaccatggaggatgaaaaacaccttgataatcttccagat
cacagggaacaaacatgtaaagcgttgatagaagagacagaggaggacaagtcagctctc
agcgcccagtcagctcctcagtcatcattatctttcagctacgattccagtggcgttata
acctcagagcctgaaggcaacagggtcagatacatcagggaaatgttcctggcaaagagt
ggcacagatgtaaagcccggacagagatgtttcccaagcccgaacacatcagagctgtcc
aagttaagagcagagacctcagctagtggcgggtatcagtctcagacttcaagtgagctg
tctagcggcgaagatgattcagcacgtaagtccatcaccaaaggttttgtgagaagaaca
attgaaaggctttatggcaagaaggatgctaatcctgatgaggaagcaaatgaaaggccc
ccatctgcgccaaaacagaaaaagaaagaacactcaagcattttctctcccttccacata
gctgggtccaaagccatgtctgagttgtcttacttcagttccactaatgcactggacacc
ttaagtgaagcaacacgatgcgttgcttttaacgcacaagtcgggcctgaagagagtgtc
cgatggctcctcagagagaacacactgatcagaaagtctgtttcagacccagttggaata
aacaaaaccttcacaagctctcctcaaggcggagcaaaatgcgaggatgcagaagagaac
gcctcaagtcccccttttagcacaaagtctgacctggaagacaataagtcactttcaagg
aagtgcacctacttttctttgccccatgctagtgactcagatgcatgtcaggatgacctg
agcatagttagcaagagcggtgagagtatcacagatccaaaggacaattcaggggacacc
aaaatgggggcagataggaatggctcgctgccagttgttggtattactgactttaagatg
aaggataacaaagtgcacccgttgacagagcctccacctgatggtgaggctgtagttgtg
cagcctgggaaaggtcagggtgttatgaacagaaggattcaggagcctgacatgctggac
ttactgtacaatttttgtggtcagaattgtcccatcctgtga
DBGET
integrated database retrieval system