KEGG   Micropterus salmoides (largemouth bass): 119883938
Entry
119883938         CDS       T07309                                 
Symbol
ccnt1
Name
(RefSeq) cyclin-T1
  KO
K15188  cyclin T
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119883938 (ccnt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msam03021]
    119883938 (ccnt1)
Transcription machinery [BR:msam03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     119883938 (ccnt1)
    Brd4/P-TEFb complex
     119883938 (ccnt1)
    7SK RNP complex
     119883938 (ccnt1)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 119883938
NCBI-ProteinID: XP_038550348
LinkDB
Position
Unknown
AA seq 689 aa
MAASFRSLPANCNNKWYYTREQIDNSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQ
LTINTAIVYMHRFYMVQSFTRFHRNVISPAALFLAAKVEEQPRKLEHVIKVAHACLNPQD
PSPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQT
SYFMATNSLHLTTFCLQYSPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLEL
LDELTHEFLQILEKTPSRLKRIRNWKAGGQTPKAKPKVQEEGDQRDTMMSMISMASSETT
VAGLMSLSAPPSASSSSSMGDKDSGASGSTQSWSGKGQAGSEQQPNNEVHVPAKVSLSEY
RAKNADVLAAQKRKLENMEASVKREYANAAQALIGQQRKEKQHHHQQSSSSSSSDMSTPS
PIILKIPLEKERHDRSSLKMRLPLAGGGGSGSARGQEQDIKVRIRVPEKQRGSSGEEGKS
RDKHRERSNHHHNHHHHHHHSSSSGASLSSSHKHSSSSSGALGSSKKVPSDSSRTSSSSS
SASRKRTHSQDPTAGSHPASKVSKSSRNLYQLPSLSSSSGQTLGQGPDILPALGLPHHQG
SYSHSKGDKTDTNGHGATGGAQSNEYQDTFEMLNSLLSAQGVQPAQPAMLFDYRSQYGDY
RYSGGSRGNNARPPPLPSEPPPPLPPLPK
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggcggcttcgtttcgttctctccctgcaaactgtaataacaaatggtactacacccga
gaacagatcgacaacagcccatctcggcgagctggacttgatcctgacaaggagctgtcc
tacagacaacaggcggcgaacctgctccaggacatgggacagcggctcaatgtgtcccaa
cttacaattaatacagctattgtgtacatgcatcgattctacatggtccagtcattcacc
aggtttcacagaaatgttatttctcctgccgcactcttcctcgctgcaaaggtcgaggag
cagccccgcaaactggaacacgttatcaaggtggcccatgcatgcctcaatcctcaggat
ccctcaccagatgtccgcagtgatgcctacctgcaacaagcccaagacctggtcattctt
gagagcataatactccagaccttggcttttgaaatcaccattgaccatccacatactcat
gttgtcaagtgcactcagctcgtaagagttgttccagctagtaaggatctggctcaaaca
tcatacttcatggccaccaacagtctgcacttgaccacattctgcctgcagtacagcccg
cccgttgtggcctgtgtgtgcatccaccttgcctgcaaatggtccaactgggagatcccc
gtgtccacagacggcaaacactggtgggagtatgttgaccccacagttaccctcgagttg
ctggatgagctcacacacgagtttctgcagattctggagaaaacacctagccggttgaaa
cggattcgcaactggaaggctggaggtcagacgccaaaagccaagccaaaggtccaggag
gagggtgaccagagggacactatgatgagcatgatttctatggcctcatcagagaccact
gtggcgggcctgatgagcctctcagcaccaccttctgcctcttcttcctcatccatgggt
gacaaagacagcggtgcatctggcagcactcagtcttggagtggaaaaggtcaggctgga
tctgagcagcagcccaacaacgaggttcacgtcccagctaaggtgtcactgagtgagtac
cgtgccaagaacgcagatgtcctggccgcccagaagaggaagctagagaacatggaggcc
agcgtgaagagggaatatgccaatgctgcccaggctctcattggtcaacagaggaaggag
aagcagcatcatcaccagcagtctagctcctcctcctcttctgacatgtccaccccgtca
ccaataattctgaaaatcccccttgagaaggagaggcacgacaggagctctcttaaaatg
cgtttacccctagctggcggaggaggcagcggcagcgcccgaggtcaggaacaggacatt
aaagtcagaatacgagtgcctgagaagcaaagggggagttcaggagaggagggcaagagc
agggacaagcacagggaacggtctaaccaccaccacaatcatcaccaccaccatcaccat
tcttcctctagcggcgcctcactctcctcttcacacaaacattcatctagttccagtggg
gcattaggaagcagcaaaaaagtccccagcgactcgtctagaacaagctcttcgtcttct
tctgcctcacgtaagaggacacactcccaagatcccacagcaggctctcaccctgcctcg
aaagtcagtaagtcctctaggaatctctaccagctaccgtccctgtcttcctcctctggg
caaactctggggcaaggtcctgacattctccccgctctgggccttccccaccaccaaggg
agctattcgcactccaaaggcgacaagacggacactaatgggcatggtgcaacaggcgga
gcccagtcaaacgagtaccaggacacttttgaaatgctaaactcgcttctgagcgcacag
ggggtccagccggcccagccggccatgttgtttgactatagatcccaatatggggactac
aggtacagtggtggctccagagggaacaacgctaggcccccacccctgccttcagaacca
cctcccccactgccgcctttacccaaatga

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