Micropterus salmoides (largemouth bass): 119883983
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Entry
119883983 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
msam04054
]
119883983
Pattern recognition receptors [BR:
msam04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119883983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
DUF1463
DUF3725
Motif
Other DBs
NCBI-GeneID:
119883983
NCBI-ProteinID:
XP_038550406
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MGPGVNKEKMKPRGGSKCYILSVTLLLWNINRLVIPVEGFSLRSCRISYNNAICTKSKLT
AVPQDIPPTVQGLDLSANQLIKIQSSDFKHLSLLTQLDLNRNRISKIDTGAFANLISLKK
LNLNNNKLDKLVDNXFDGLRNLMELRINNNHINSVGSATFTSLRSLRFLDISCNKLRSIT
KFNYTLQYLPNLRVLSIKRNDLTVFNSWQLTNRSLPLTSLDLSQNSIAAFRITADVFPNL
TWFNMGASFKKHKMIWDVRNETFLSQVSTLDISGLHLPDDIKAFLGSFSSLTSLRMNGMK
RNRLPALINISCTIPSVTTLQLRSNNLTFVDSDMFQLCINVTELDLTSTYITNIQDEAFR
SIRGLRILSLSRNRIASVPAATRNIPTLSELDLSTNLIASLGCHDFANLTKLRQLNLYNN
KISALQECLFKDLIGLQVLKLQNNQISILNGAFKKYLPNLRRLHLNENKLTAIEYGDFQG
LKSLQNLSLHQNQIQSIKKGSFIGLTSLTDIQLQNNEIKQEEIKTCFNVLTNLRRLELRD
NHIKYKDSSALPNPPFSQLSLLETLAIPAQHYRGRSQLPRNFLQGLTNLLVFNIRNIQLL
YLHKDMFNYTPRLQTLDISSNELKDLSPDLFSPIGSLKSLYISRTNLQSLDFFIEANLTN
LEFLQARKNMYSVISEEVIKSLPALIYMDFQGNSFTCDCDNAWFLQWTQNNTNTQVFDAY
NFGCNYPPDYKDTKLLDLNINSCSVSIDFIYFVSITSIILLFMVASFTCHFLRWQLVYAY
YYFLALLFDTKHRNKQAPYQYDAFISYNNHDEPWVIRELLPKLEGEQGWRLCLHHRDFEP
GRPIIDNITNGIYGSRKTICVISRRYLESEWCSREIQAASFRLFDEKKDVLILVFLEEIP
TFQLSPFYRMRKMLKRRTYLSWPRAGEHTELFWKKLCQALKSGEDHGEDRFRLTVVDRP
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctggagtgaataaggagaaaatgaagccaagaggaggatcaaaatgttatata
ttaagtgttactttactcttgtggaatatcaacagattagttattccagtcgaaggattt
tcacttaggtcttgccgaatcagttacaacaatgccatatgtaccaagagtaaactcaca
gctgttcctcaagatattcccccaaccgtgcaaggtttagacttgtctgcaaaccaactt
ataaaaatacaatcatcagatttcaaacacttatcacttttgacacagttagatctaaac
cgaaacagaatttcaaaaatagatacaggagcctttgccaatctgatttccctcaagaag
ttaaatctaaacaataacaaacttgataaacttgtggataatncttttgatggtttgcgc
aacctcatggagctaagaattaacaataatcacatcaacagtgtgggatctgctactttc
acgtcactgagaagcttgaggtttttggacatctcttgcaataaactgcgcagcataaca
aaatttaattatacattacagtacctgccaaatctacgagttctgtcaatcaaaagaaac
gacttaaccgtttttaattcgtggcagctgacaaaccgctcactaccgctcacatccctt
gatttgtctcaaaattccattgcagcctttaggatcactgcagatgtatttccaaatctc
acctggtttaacatgggcgcctcttttaaaaagcacaagatgatatgggacgtgcgtaac
gagacttttcttagtcaagtgtctactcttgatataagtgggcttcacttgcctgatgac
attaaagcatttctagggagcttcagttctctgacttcactgaggatgaatggaatgaaa
cgtaacagactaccagcactgatcaacatttcctgcaccatcccgtcagtgaccacactc
caactccgaagtaacaatctcacttttgtcgattcagatatgtttcagttgtgcattaat
gtaacagaattagatttaacaagtacttacataacaaatatccaagatgaggccttcaga
tctattcgaggtttaaggatcttgagtctgagtcgtaacagaattgcatccgttccagct
gccacaaggaatataccaactctctcagagctggatctcagcactaacctcatcgcctca
ctcggatgtcacgatttcgccaatctgacaaagctcagacagctcaacctgtataataat
aaaatctcagctctacaagagtgtcttttcaaggatttaataggattgcaagttttaaag
ctacagaacaaccaaatctccatactaaacggtgcttttaaaaaatacttgccaaatctt
cgaagactgcatttgaatgaaaataaactcactgccattgaatatggagactttcagggt
ctgaagtcactccagaacttgtcattgcatcaaaatcaaatacaatccattaaaaagggg
tcttttattggattgacaagtcttacagatattcagctgcaaaataatgagattaaacaa
gaggaaataaaaacatgctttaatgttctgacaaatttaagaagattggaattgagggac
aatcacattaagtacaaagacagttcagctttgcctaatccaccattttctcagctgtcc
cttctggagacattagctattcctgcacaacactacagggggaggtcccagctgcctcgt
aacttcctgcaaggtttgacaaatctattggtttttaatatcaggaacattcaacttttg
tacctgcacaaagatatgtttaattacacgcctcgactgcagacacttgacattagctca
aatgaactaaaggatctctctccggatttgttttccccaattggaagcctaaaaagcctc
tacatatctagaacaaatcttcagtctctagatttctttatagaagccaaccttactaat
ctcgagttccttcaggcaagaaagaatatgtattcagtaatcagtgaggaagtaataaag
tccctaccagctcttatttatatggattttcaaggcaatagtttcacttgtgactgtgat
aacgcctggttcctccagtggacgcaaaacaataccaatacgcaagtttttgacgcctac
aactttgggtgcaactatcctccagactataaagatacaaaactgttggacctcaatatc
aactcctgctcagttagcatagacttcatctactttgtctccatcacatccataatcctc
ctgttcatggtggcgtccttcacctgccatttcctgaggtggcaactggtctacgcctac
tactacttcttggctttgctctttgacacaaaacatagaaacaagcaagctccttatcag
tatgatgcctttatctcctacaacaaccatgatgagccatgggtaatcagagagctgttg
ccaaaactggaaggagagcagggctggagattgtgtctgcaccatcgagactttgagcca
ggtagaccgatcatagacaacattacgaatggcatctatggaagcaggaagaccatctgt
gtgatcagtcgcagatacctcgagagtgagtggtgctccagagagatccaggcagccagc
ttccgtctgtttgatgagaagaaggacgtgctgatcctggtgtttctggaggagattccc
acctttcagctgtctcctttctaccgcatgaggaagatgctgaagaggcggacctacctg
agctggccgcgggccggggagcacaccgagctgttctggaagaaactctgccaggctctg
aagagcggagaagatcatggtgaggacaggttccgcctcactgtcgtggacagaccgtga
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