Micropterus salmoides (largemouth bass): 119884057
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Entry
119884057 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119884057
Membrane trafficking [BR:
msam04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119884057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
119884057
NCBI-ProteinID:
XP_038550454
LinkDB
All DBs
Position
Unknown
AA seq
1914 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPXGFT
CIDSTYSGQPANLNHGSLKSPELFLCYKRSRGKSPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRDPLPVFSTFVLTISSGEKVYGSAIQFYEPHPVDLLSVKQKIQLGLLTTVEKKMI
PNRPVNTNKCICLLSRWPFFGAFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPVSGADYGTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPA
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLVNSLSNLHHQLATVSVRQTGEEGSAV
DMTPIEADFTWHKKKTALEMEIQEAFLRFMASILKGYRSYLKPITQAPSEKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KSTKVEGESSEDTRLLELDESQKSEHTVFVMPPEPLVDDGTEPAPRYTYKSFPRLQMELF
DRPRELRPALSTRAAGASLSSSPALLAKRTKQEIKLAYKMAKRFHTNPPLWARCLFSHCY
SLWFICLPASMRLAKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVLRGVAQFKHAPH
RTSSKKGPTLNPTATADRLSHGSADSSSEVNGEEHSLFAHSHSMEDTTDTHCSTGRQSDQ
GYGSKDELHQELAEPSHTAVLSTEERSITTAQHNGGDIASXVDSAVAVAEPPSPVDVLAP
VPSIVRLSTGSFDGGRETGTGSLFRRNSKNDNVSLPDDDASLASGDVASQPQPQRQKSFA
ERSCSFSAETRAGMLLEKGVDHMASQMGADARILAAALSGGQSPPPNNVPKSLFKDLEEE
PEDDQGLTLGKLPEEEGPGAPEEGKGEDIESKGSEVKMEKRERKHTETHEDDSGLRGVPL
ERADVQVGADPLSLLVTESEESASVTSQELPRSMPAVVSRNLAEEIEMYMSLRSPLGVKS
SSMELQQAQGDSTDTPQPKLSLERRSSLPVPPVKTPAGSPGDTPKRSPSTVTRSKTFAVK
TKTPASAVGSPGPRSSSLTALVKSSQGGSLGSVINSISGIKMDTLLSGPKIDVLKSGMKQ
AANVASKVWGAVASAYSYSDDEDEEAQGGGGFPSHLDEHLLAAHEVDDSPDRGPIPGLVA
NGLNQSCTSLGSSSGSSDTGRWAHQTHPTPGRVGRGPDSEQCSSLHASSSSIYQNCALEV
LMSSCSQCRSCEALVYDEEIMAGWTADDSNLNTTCPFCRTAFLPLLHVEFHDLRTMTGFY
MNPSASGDSIHSTNAQPTASSSADIKTPDLITFPEEEPRETSADQPVIQKSLIPEPVQSD
PLGLVEHQQQKCXGTSLTRSNSVGGPLQSLDYSQRPGHGVSTTSLPCSLQEVSDGMGTKR
PNPKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPTH
LPGLILTSEHCNNGVQLPLTSLSQDTKQVYVQLLWDNINLHQEHGDPLYLLWRSLLEKKG
TLAPTDHQEIRNLLNTIVRNIQTNDVYGPINLLIREIKRRPEGVKRQRSIYREILFLSLV
ALGRENIDVEAFDREYRQAYDELSTEQLKSLHRMDRPPSASVQWCLKCFGAPFI
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgcgtgaccgactactttgtggtggctgggctgacagac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcccaaggcaccc
atcactgacttggccgtcattaacaagtcggcaggagaaaccgtgccgnagggcttcact
tgcatcgacagcacctacagcggccaaccagccaaccttaatcatggcagtcttaagagt
cccgagctgttcctgtgctacaagaggagtcgagggaagtctcctctcattgacattggt
gtgctgtatgaagggaaggagcgactgatccagggctgcgaggtcatccaggccacaccg
tacggccgctgcgccaacgtcaacaacagctccgccacctcgcagcgcatcttcatcact
ttccgccgagcgccgcccgtccagcctcagaactccctggcagttacggacatctgcgtc
attgtcaccagcaagggcgagacgccgccacataccttttgtaaggtggataagaacctc
aactgcggcatgtggggctccaacgtcttcctgtgttacaagaaatcagtatctgcgtcc
aattccatcagttacaaagctggtctcatctttcgttacccagaagaggactatgagtct
tttcctctgtcagaatctgtccctctgttttgtttgcccatgggtgccaagatcgagtgt
tgggcaccaaacacgcgtgatcctctgcccgtcttctccacgtttgtcctaaccatctct
tctggtgaaaaggtgtatggatcagccatccagttctacgagccacatccagtggatctg
ttgagcgtgaagcagaagatccagctaggcctgctcaccacggtggagaagaagatgatc
cccaatcggcccgtgaacaccaataaatgcatttgcctgctctcccgctggcccttcttt
ggggccttccgcaagttcctgatgttcctctacaagctctccgtctcaggcccacaccca
ctccctattgaaaagcacatctcacacttcatgcataatgtgtcatttccttcccctcaa
aggccaagaatattagtccagctctcggcacatgacactttgatcctctcccagcctgtg
tgcacacccttacccgtcagtggggcagactacggcactctgctgatgaatctgggctcc
gagaactgcgccacgctgctgcactttgtcctgctggagagcaagatcctgctgcactca
ctgcggcccgctgtgctcactggagtggccgaggctgtggtggctatgatcttccccttc
cagtggcagtgtccctacatccccctgtgcccgctctctctagcaggtgtcctcaacgct
ccatgtccttttatagtgggtgtggactctcgctacttcgacctttacgaccccccagca
gatgttgtctgtgtggatctggacaccaacactatctacctgtctgacgaaaagagacac
agcaactggaagaacctcccaaagaagccctgcaagagtctcgttaactcactgagcaac
ttgcaccaccagctggccacagtttcagtacgtcaaacaggtgaggaaggctcagcagtg
gacatgacccccatcgaggcggacttcacatggcacaagaagaagacggccctggagatg
gaaatccaggaggccttccttcgcttcatggcctccatcctgaagggctaccgctcctac
ctcaaacccatcacccaggcgccctccgaaaaggccacggccgcggactccctctacgac
ctgcaaggtttcctcaaaagccgagaccgcgcccaccagaagttctactcccagctcacc
aagacccagatattcatccgcttcattgaggagtgcacgtttgtcagcgacaaggacact
ggcctggccttttttgacgactgcgtggagaagctttttccctctgataaaatcaccgac
aagagcaccaaggttgagggagagtcatctgaggatacgagactgctggagctggacgag
tcccagaagagcgaacacacagttttcgtcatgccccctgaacctttagtggatgatgga
actgaacctgcccccagatacacctataaaagtttccccaggctgcagatggagctgttt
gaccgtccaagggagttaagaccagcacttagcaccagagcagcaggggccagtctgtcc
agcagccctgcattactggctaaaaggacaaagcaggagatcaagctagcatataagatg
gctaagaggtttcacaccaaccctccgctgtgggcccggtgtctgttcagtcactgctac
agcctgtggttcatctgcctgccagcaagcatgcgactggcaaagtctaaaagccgtgcc
atgcagcaggcgtacaacgtcctcctgaagatgaggaccactgaggtggaggtgctggac
gaggtgtgttacagagtggtgatgcagctctgtggcgtgtggggtcttcctgttatggct
gtgagagtcctcgttgagatgaagaaagcaggagtgcacccgaacgccatcacatatgga
tactacaacaaggccgtcttagagagtccatggccgagtagaaaccgtagtggcctcttt
atgtggacgaagctgcgcaatgtgctccgtggagtggcccagttcaagcacgctcctcac
cggacatcttccaagaaggggcccacacttaacccaacagctactgctgaccgtttgagt
catggaagcgctgacagctcaagtgaggtcaacggcgaggaacacagcctgtttgcccac
agccacagcatggaagacacgacagacacccactgtagtacaggaaggcagtctgatcaa
ggctacggctccaaggatgagttacaccaggagctggcagagccttcacacactgctgtc
ctttccactgaagagagaagcattaccacagcacagcataatggaggtgacattgccagc
ntcgtggacagtgctgtagcagtagcagagccccccagtcctgttgatgtgctggcacct
gtccccagtattgtgaggctgtccactgggagctttgatggtggcagagaaacgggtaca
gggagcttgttcaggagaaacagcaagaatgacaacgtgtctcttcctgatgatgatgcc
tcgctggcatcgggggatgtagctagccagcctcaaccgcagcggcagaaatcctttgct
gaacgcagctgtagcttcagtgctgaaacccgcgctgggatgctgctagagaaaggcgtg
gaccacatggccagtcagatgggtgccgatgcccgcatcctggctgccgcgctcagtgga
ggccaaagtccacccccaaataatgtgcccaaatccctttttaaagacctggaggaagag
cctgaagatgaccagggcttgacactggggaagctgccagaggaagagggtccgggagca
ccagaagaagggaagggagaagacatagagtcaaaggggtctgaggtgaaaatggagaaa
cgagagaggaagcacactgaaacacatgaggatgactctgggctgcgaggagtgcccctg
gagagggcggacgtgcaggtgggtgccgacccactttccctcctggtgaccgagagcgag
gagtcggcctctgtcaccagccaggagctgccgcgctccatgcctgctgtggtgtcccgc
aacctggccgaggagattgagatgtacatgagcctgaggagccccctgggcgtcaagtcc
tccagcatggagctccagcaggcccagggagactccaccgacaccccacagcccaaactg
tctctggagcgccggtccagcctccccgtgcctcctgtcaaaactccagctggctcaccg
ggcgatacacccaaacgcagcccctccactgttactcgctccaagacttttgctgtaaag
acaaagacccccgccagcgctgtgggtagcccgggtcctagatcatcctcattgacggcg
ctggtcaaatcctcccaaggagggtcgttgggctcagtcatcaactccatttcaggcatt
aagatggacaccctcttgtcgggacctaaaattgatgttcttaagtcaggcatgaagcag
gcggcaaatgtggccagtaaagtgtggggggcagttgcttcagcttactcctactcagat
gacgaggatgaagaagctcagggtggcggcggcttcccgtctcacctggatgaacacctg
ctggctgcacacgaagtagatgacagtcctgacagaggtcccatccccgggttggtggcc
aacggtctaaaccagagctgcaccagcctgggcagcagcagcggcagcagtgacacaggc
cggtgggcccaccagacgcatccaactcctggacgagtgggcaggggtccagactctgag
cagtgctcctcacttcacgcttcctcgtcaagcatttaccagaactgcgcactggaggtg
ctgatgtccagttgctcccagtgccgctcttgtgaagccctggtgtacgacgaggagata
atggcgggctggacagctgacgactccaacctgaataccacctgccctttctgtcgcaca
gcctttctccccttgttgcacgtggagtttcatgacttgcgcacaatgaccgggttctac
atgaatcccagtgcctcaggagacagtatccacagcaccaacgcccagcccacagcgagc
agctcggctgacattaagacgccagaccttatcactttccctgaagaggaacccagggag
acttcagctgatcagcctgtaatacagaagagtctgattccagagccagtgcagtcagat
cctctgggtcttgtggagcaccagcagcagaaatgcnatgggacgtcactgacacgcagc
aacagtgtgggtgggcctctgcagagcttggactactcccagagacccggacatggcgtc
tccaccaccagcctgccctgcagtctgcaagaggtgtcggatggcatggggactaaacgg
ccaaaccccaagcctgtgtccgtaccatacctcagccccttggtgctgcgcaaggagctg
gagaccctgttggagaatgaaggagatcaggtgatctacacccacaagttcctcagccag
caccccatcatcttctggaacctggtgtggtatttccgtcgtctggacctgcccactcac
ctacctggtctgatccttacttctgagcactgcaacaacggagtacagctgcccctgacg
tcactgtcccaggacactaagcaggtatacgtccagctcctgtgggacaacatcaacctg
caccaggaacacggagatcccctctacctgctctggaggtccttgttggagaagaaaggg
acgttggctcctacagaccaccaggagatccgtaacctcctcaacacaattgttcgcaac
atccaaaccaacgacgtctacgggccaatcaacctgttgatccgagagatcaaacggcgc
cctgagggtgtcaaacggcagaggagtatctatagagaaatattgttcctctcactggtg
gccttggggagggagaacatcgacgtagaggccttcgacagggagtaccgccaggcttac
gacgaactgagcaccgagcagctcaagtctttgcaccgcatggatcgaccgccaagcgcc
agcgtccagtggtgccttaaatgctttggggccccgttcatctga
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integrated database retrieval system
