Micropterus salmoides (largemouth bass): 119884212
Help
Entry
119884212 CDS
T07309
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03030
DNA replication
msam03410
Base excision repair
msam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119884212 (pole)
03410 Base excision repair
119884212 (pole)
03420 Nucleotide excision repair
119884212 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msam03032
]
119884212 (pole)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119884212 (pole)
Enzymes [BR:
msam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119884212 (pole)
DNA replication proteins [BR:
msam03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
119884212 (pole)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
119884212 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
APP_N
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
119884212
NCBI-ProteinID:
XP_038550606
LinkDB
All DBs
Position
Unknown
AA seq
2293 aa
AA seq
DB search
MVLQNSGRFKADRGQSGGDQENQDDGSSMSAVKRLERSQFTDEMDARFGFDRMKEPGEKT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYVATKKNCEREVISYL
SKKFQGKVAKLEMMPKEDLDLPNHLVGLKRNYIKLSFNTVDELIKVKREISPVVRKNRER
EQSNDAYTSMLSSALSGGNVTSADEDGMSKSISDQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSTYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYM
IDGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEADEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFIETRAALHGLSMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLMQRVERTMRHAIEEEEKIPLEQVTNFNEV
CDEIKKKLNSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAADIKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTTNEKKPKVTISYPGAMLNI
LVKEGFTNDQYHELVDPASLTYNIRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGAQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LEAGQAVDMEDFGMPARPLQPAILISTKRKRASQGEDSQVESQDVELTQSWREILGPPPP
AGNTREERLVWLRYHKKKWELQLRQRKERKKRRKLLDGEAQPVGGGVIRDGPITGLGSFL
RRTARSILDMPWQIVQIAETNHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNVVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKHVVRDLAGREADTFDLENLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLGNLYTAERTALLEKTTEELLPPEKHNFEVRAEN
DAKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEINY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKVFLQLISEFKRL
GSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDP
ANCGGVKGKLPSSVLYGEEGTKQKKNRRGEGDEEGSEDEEDDEAEEDDGDGETDEVEELI
ESNWNIMQYLPQTASCQKYFLMTVSAYIAAVYHSMKEELRRNAPGATPIKRRGGSQASQL
AVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRNVTQPSEMFPVLPGSHLP
LNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPEV
ICHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETESIEMALVDALQKKLMSYTL
QDLVCTKCKGVKEANMPLYCRCAGDFDLTFSAKSFSEQITVFRNIASHYNMSFLEETIDW
LFVMSPHISQSTH
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggacggttcaaagcggaccgaggacaaagtggaggagatcag
gaaaaccaggacgatggatcctccatgtctgccgtcaagcgcctggagcgcagccagttc
accgacgagatggacgcgcggttcggcttcgacaggatgaaggagccgggggagaaaaca
ggctggctgatcaacatgcatcctacagagatcctggatgaagacaagaggatgatcagt
gccgtggactactatttcatacaggaggatggaagcaggtttaaggtggccctccccttc
aagccatatttttatgtcgccaccaaaaagaactgcgagagagaggtaatctcatacttg
tcgaagaagttccaaggaaaggtggcgaagcttgagatgatgcctaaagaggacctagac
ctgccgaaccatctagttggactgaagagaaactacatcaagctgtctttcaacaccgtg
gatgaactcatcaaggtcaagcgtgagatctcccctgtggtacgcaagaacagagagagg
gagcagtccaatgacgcctacacctcaatgttatcaagcgccttatcgggtggcaatgtg
acctcagcagatgaagatgggatgtcaaagagcatttcagaccagttagacaacatagtg
gacatgagagagtacgatgtgccctatcatgtgcgattgtccatcgacctcaagatccat
gtggctcactggtataatgttcgatacagaggcagcacttacccacccgagattgtacgg
agagatgatcttgtggagcgaccggaccctgttgttctggctttcgatatagagaccacc
aagctcccgctgaaattcccggacgcagagagcgatcagattatgatgatctcctacatg
atcgacggacagggatttctgatcacaaacagagagattgtctctgaggatattgaagat
tttgagttcactcccaagcctgaatatgaaggtcctttcactgttttcaatgaggctgat
gaggcggccctcattcagaggtggttcgatcacgttcaggaaaccaaaccaaacatcttt
gtgacctacaatggagacttctttgactggccttttattgagactcgggctgccctccat
ggactgagcatgcacagggagattggtttccagaaggataaccagggagagtacaaatcc
agtcaagccatccacatggactgcttaaggtgggtaaagagagacagctacctgccggtg
ggaagtcataatctgaaggcagcagcaaaggctaaattgggctacgacccagtggagctg
gacccagaggagatgtgccgcatggcaacagaggagccacagactttagccacctactcg
gtgtcagatgccgtggccacatattacctgtacatgaaatatgttcaccccttcatcttc
gctctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggact
ctgtgtgaagctctgctcatggtgcaggccttccacgcaaacatcgtcttccccaacaag
caggagcaggtcttcaacaaactgacggacgacggccacgtcatggactctgagacctac
gtgggcggccacgtggaggcgctggagtccggagtgttccgcagtgacatcccctgccgt
ttcaaaatgaacccagctgcgtttgacttcctgatgcaaagagttgagagaactatgcgt
catgccatcgaggaagaggagaaaatccctttagagcaagtcaccaactttaatgaggtt
tgcgatgagatcaaaaagaaactgaattccctgaaagaggttccaaacaggattgaatgc
cccctcatctaccatctggacgttggggcgatgtaccccaatatcatcctcaccaaccgc
ctgcagccatccgctatggttgatgaggccacttgtgctgcctgtgactttaacaagcct
ggtgccacctgccagaggaggatggcctggcagtggagaggggaaataatgcccgccagc
cgcagtgagttccaccgcatccagcagcagctggagtctgagaagttcccgccatttttc
cccaacggtccacctcgggctttccacactctcaacagggaggagcaggccaaacacgag
aagaaacgtctggcagactactgtaagaaggcctataagaagacacacgtcaccagactg
gaggagcgagtcaccaccatctgtcagagagaaaactccttctatgtcgacaccgtgaga
gctttcagagatcggcgttacgaattcaaaggactccacaaggtgtggaagaagaaactg
tctgcagctcaggacagcggagatgctgctgacataaagcgctgcaagaacatggagatc
ctgtatgattctcttcagctggctcacaagtgtattctcaattctttctacggctacgtc
atgaggaaaggggcgcgttggtactccatggagatggctggcattgtgtgctacaccgga
gccaacatcatcactcaggccagagagctcatcgaacaaatcgggagaccccttgagttg
gacactgacggtatctggtgtgtcctccccaacacctttcctgagaactttgtggtgaaa
accacaaatgagaagaagcctaaggtgaccatctcttacccaggggccatgctgaacatc
ttggtgaaggagggattcaccaacgatcagtatcacgagctggtcgaccccgcgtcactc
acttacaacatcaggtcagagaacagtatcttctttgaggttgacggaccgtacctggcc
atgatcctgcctgcatcgaaagaggaagggaagaagctgaagaaaaggtacgctgtgttc
aatgaggatggctctctggctgagcttaagggttttgaagtgaagagaagaggagagctc
cagctcattaagatttttcagtcatcagtgtttgaggctttcctcaaaggtaccactctg
gaggaggtttacgcctcggtggccaaagtggctgactattggctggacgttctgtacagc
aaggctgccaacatgccggatgcagagctgtttgaactgatctcagagaatcgttcaatg
tccagaaagctggaggactacggagcgcagaagtccacatccatcagcacagctaagaga
ctggctgagttcttgggagaccaaatggtgaaggatgctggtctgagctgtcgctacgtc
atctcccgaaaaccagagggttcgcctgtcacagaaagagctattcctctggccatcttc
caggcagagcccagtgtgaagaaacacttccttcgtaagtggctgaagatgcccagcctc
cacgacttggacatccgctctatccttgattggagttattacatcgagaggttgggtagt
gctatccagaaaatcatcaccatccctgcagctcttcagcaggtgaagaatccggtaccc
agagtaaggcatcctgactggcttcacaagaaactcctggagaaaaatgatatctacaag
caaaagaaaatcagtgagctattcaccagtgagggcaagagacaggtggcccatcagcct
cttgaagcaggccaagccgtggacatggaggactttgggatgccagccagacctttgcag
ccagccatcctcatcagcaccaagcggaagcgggcttctcagggagaggacagccaggtg
gagtctcaggatgtcgagctcactcagtcctggagagagatcctcgggccacccccacct
gcgggtaacacacgggaggagcgtctagtgtggctacgttaccataagaagaagtgggag
ctgcaactgaggcagaggaaggagaggaagaaaaggcggaagctgctggatggtgaagct
caacctgtagggggaggggtgatcagagatggccctatcaccggcctgggaagcttcctc
cgcagaacagcacgcagcatcctggacatgccatggcaaatcgtgcagattgcagagact
aatcaccctggtctgtacaagttgtgggctgtgattggaaatgacctccactgcatgaag
ctcaacatcccgcgtgtcttttatgtcaatcagaaagtcccaaaacaggaagagggagcc
acatacaaaaaggtgaaccgcatgctgcctcgctccaacgtggtgtactacctttatgag
tactgtgtaccagaggacatgtatcaggagcacatcaatgagatcaacgctgacctttca
gccccagacattgaaggggtctatgaaacacaggtcccattgctgtttcgtgcactggtg
cagctcggttgtgtgtgtatggtcaataaacatgttgtgagggatctggctggcagagag
gcggacacttttgacctggagaatctggagatgaggtctctggcccagttcagctacctg
gaacctgggagtgttcgccacatgtacttgtatcatcacagccagggtcacaaggctctg
tttggcctgttcatcccctctcagcgcaaagccagcatctttgtcctggacacagtccga
agcaaccagatgcccaaccttggtaacctctacacagctgaacgcactgctctcctggaa
aagacgactgaggagctcctgcctccagagaaacacaactttgaagtccgagcggaaaac
gacgcaaaggctatttaccgcgcactgcaacgcatactactaaactacaaggaggagcgt
cgtgggcccaccctcatcgctgtgcagtcaaactgggagttgcggcggttggcagcgggg
atgccagtacttgaggagtttccagttgttcccgtgcatgtggttgatgagatcaactat
aatgtgctggactggcaacgccacggtgcccggcgcatgatccgccactacctcaacctg
gacagctgcctttcacaagctttcgacatggccagatattaccacttacctgtggggaac
ttgcctcaggatgtgtccatctttggctcagacttgttcctggcaagacatctacggaaa
cacaaccacctgctgtggctttcacccacagccaggcccgacctcggaggaaaagaggct
gatgacagtcgtctggtcatggaaagtgatgaccggggctctgtggagatcaatgctcaa
ggatgctattccacagtgtgtgtggagttggacctgcagagcctggcggtgaacaccatc
ctccagtcacagcacgtcaatgacatggagggcggagctagtctgggtgtcagttttgat
gtgatccagcaggcttcgttggaggacatgatgtcaggaaaccagggagccagcgctctc
gctagctatgatgagactgcgctctgctccaacacattcaggatcctgaagagcatggtg
gttggatgggtcagagagatcacacagtaccacaatgtgtatgcagacaaccaggtgatg
cacttttaccgctggctgcgctcccccagctctctgctctatgaccctgcactgcaccgc
accctgctcaacatgatgaagaaggtgtttctgcagttgatttcagagttcaaacgtctc
ggctccaccgtggtgtacggaaacttcaacaggatcatcttgtgtactaaaaaacggagg
atagatgatgccattggctacgtagaatacatcaccaacagcatccactccagagaaatc
tttcactctttgtccatctctttctcccgatgctgggagttcctgctgtggatggatccg
gccaactgcggcggcgtgaagggcaaactgccctccagtgtcttgtatggagaggaagga
accaaacagaagaaaaacaggcgaggggagggagatgaggagggcagcgaggatgaagaa
gatgacgaagcagaggaagatgatggtgatggagagacggatgaggtggaggagctgatc
gagagcaactggaacatcatgcagtatctgccccaaactgcctcctgtcagaaatacttc
cttatgactgtctccgcctacattgcggcggtgtaccacagcatgaaagaggagctgaga
cgtaatgctcctggtgcaacaccaatcaagagacgtggaggcagccaggcttcccagctt
gcagtgggggacttgagcgctcttcctggaatgatctccttctcccaggaatatgtgtcc
agcgagctgacacagaactttttcactatcactcaaaaaatccagaaaaaggtgactggt
accaggaatgtgacccagccctcagagatgttccccgtgctgcctggatcccacctgcca
ctcaacaacccagcactggagtttatcaaatatgtctgccaggtcctttcactggatgcc
aacatagtgaaccaggtgaacaagctaaaaagagaccttctgcgtctcgtggacgttggg
gagttttcagaggaagcccagttccgagacccctgtaactcctacatcctgcctgaggtc
atctgccaccattgcaatttttgccgtgacctcgacctctgcaaggatccgtctgtggcg
caagatggatcagttttgcctcagtggttctgctccaactgccaggcgcagtatgagact
gagtctattgagatggctctggtggacgctctgcagaagaaactgatgagctacacactc
caggacctggtttgcacaaaatgtaaaggagtgaaggaagcgaacatgcccctgtactgc
agatgtgctggagactttgacctcactttctcagccaagagcttctctgagcagatcaca
gtgtttcggaacatagcgtcccactacaacatgagcttcctggaggagaccattgactgg
ctgtttgttatgagcccacacatcagccagagcactcactga
DBGET
integrated database retrieval system
