Micropterus salmoides (largemouth bass): 119884252
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Entry
119884252 CDS
T07309
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119884252 (rpap1)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119884252 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
119884252
NCBI-ProteinID:
XP_038550643
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MMQSAKLAVCGGQFESPNKTTYHTKNLCYVYPDSGALPSVLKEGGRSYRGMLRRPKPTDS
EADLLREQEQFLTSGAPSAANVVRRPDKRRGEAGGGGEHNGENEGRQRDVVTIEDLPDQL
PSLTPAPPKKSRFKASRVTFEAEDAEERLDRHDTHISAVLSRIVERDISSTPVSLPAFTG
MAFPKVLHRSETNSQVPLSSAGGRKSIFACQIAAQRSKEGKTPLHCAPEAAQTPGHNLPP
EASMDTDQLDSADDQPNTVSAPRLVSGQGLEGPGSSEETIRIHRENQAKLQGMSKSEILQ
EQKKLLSQLDPRLVEFVRSRKAQSVPSSASPSKHPQGKSSKENVPLENVSRESGSCSAAV
LFQKPQEVEMEGVKEEELPPAVTVEDLPVKPQKEWVHMDKLEPEKLEWMRDLPAPRRKGT
KTAMQARFDFAGSLIPPTEDLPTHLGLHHHGEEPERAGYSLQELFLLSRSQVIQQRSLAL
STLANILSKARAGEYLPVLKGNMLSTLLDAGLLFLLRFALDDGVEGVMSAAVHALKALLV
CAEDEECLDCTFSWFRGLASFPLLPSAQEEEDEEDDEGLPESMKDTAKEKEERKSDHDVA
RKDVVKGLLRMKLLPRLRYILEVVRPSPRVVQDVLEILIRIARHSSSSATQVLDCPRLME
MVLSEFLPTSWTAPSLPLPPSVYGLPLASTMKLLRVLATAGRHACARLLNSLGVRERLSC
LLSAEPSELLLEPTAALRITTEAYRLWAVAAGYGQAGKLYIDLYPGLAKALQSIHRVTDP
SDPLLPLQLQRILALLSLLTQVTHTAGCHQELQAGMVSSQGEQCPPPPPVSWGHVTGLQA
SLLGHLKGFVKNLDNPVQKGNSLAVIPAYLVYLEAYYHQLFRQGPGMLEPIPADSGQEAK
YSLDRTPVHRRKEKNCFQPVETLQELELLTSEVLLPLLSHHVVQGLIKNLKSSSVVCNDQ
SSHVGPETNPSLPGLACPGWRDRPGLVVPSSPFPLLTSLALLLETITGIHKGLSSKFAGL
LLSESVVGYLRGCSQATPTLSHTRAWLLRHEHHLLYLLLRLAHRLVPIVPEVAKHAPLYH
QVALVLLPWLLPGSEYLAHELLSTIIFSKDFISEGHSGGPEAVELGELKLQEEAQHQTSP
SLQTAGALLREACVQLPSIRGCFLTHLAHLEPSVLMSRDALLGRNPWINSYLLPELTGPT
VPSDWPFLPLVSLYERTGVCDGGGLAVEELPQGALQAVIHCLQWLLLLEVWREEALKVIP
PVAKLARLSCVFLCSSDLFLERPVQKLTWGLCRLLTRQSRLDSLDLNVPPPGLASFQDLY
SALLTQYEAVSFGDRLFGCWVLLPLQRRYSTTMKLAVFGEHVGMLRSLGVTLEQLSIPIE
RFTSPPEDSLPLLRLYFRSLVTGTLKPRWCPILYVVALSHVNSFIFSQDAAAQEVEAARH
SMLRKIYYLTDEVLRSHLLHFRLPRQHSEFGFDMYDQLPPIRAKRLESVLRLQDSGDDKG
D
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtctgcgaagcttgctgtctgtggtggacagtttgaatcgcctaataaaacc
acgtatcatacaaaaaatctgtgttatgtttatccagattcaggtgcgctacccagtgtc
ctgaaggagggaggcaggagctatagagggatgttgcggcgtcccaagccaactgactct
gaggcagacctgctgagagagcaggagcagtttctgacctccggtgccccgtctgctgcc
aatgtggtccgccgacctgacaagaggagaggcgaggctggaggaggaggagaacataac
ggggagaatgaagggagacagagggatgttgtaaccatagaagatcttccagaccaactc
ccgtctctgacaccagcccctccaaagaagtcacgctttaaagccagccgtgtcactttc
gaggctgaggatgctgaggagaggctggacaggcatgacacgcacatcagtgctgttctc
tccaggatcgttgagagagatatcagctctactccagtatctctaccagcatttacaggc
atggctttccccaaagtattgcaccgctcagaaaccaacagtcaggtgccactgtcttca
gctggtggaaggaagagcatctttgcatgtcagattgcagctcagagatctaaggaggga
aagacacctttacactgcgcacctgaagctgctcagacacctgggcacaacctgcctcct
gaggccagtatggatacagaccagttagattctgcagatgatcagccaaatacagtctct
gctcccaggctggtgtcaggtcaggggcttgagggcccagggagctcagaagagaccata
aggatccacagggaaaaccaggctaagctccagggaatgtctaagtctgagatcctacag
gagcagaagaaactcttatcgcagcttgaccctagattggtggagttcgttagatctcgc
aaagcccagagcgtaccgtcctctgcctccccatccaaacacccccagggcaaaagcagc
aaggaaaacgttcctcttgaaaatgtgagcagagagtcaggctcctgcagtgctgctgtg
ctgtttcagaaaccccaagaagtagagatggaaggagtaaaggaggaggaactgccacct
gctgtgacggtggaggacctgccggtgaagcctcagaaggaatgggtccacatggataaa
ctggagccagagaagctggagtggatgagagacttgcctgcaccaagaaggaaaggaacc
aagacggccatgcaggctcgatttgactttgcggggagcttgattccacccactgaggat
ctgcccacccacttaggcctgcaccatcacggagaggagcctgagcgggcaggttactcc
ctgcaggaacttttcctgctgtctcggagtcaggtcatccagcagaggagtctggccctc
agcactctggccaacatcctctcaaaggctcgtgctggggagtacctgcctgtcctgaaa
ggcaacatgttgtccactctgctcgacgctggcctgctcttcctgctgcgctttgcgttg
gacgacggtgtagagggagtgatgtctgcggccgtgcatgcacttaaagcactccttgtg
tgtgcagaggatgaagagtgtttggactgcaccttctcctggttccgtggcctggcctcc
ttccctctgctgccgtctgctcaggaggaggaagatgaggaggatgatgaagggctgccc
gaaagcatgaaggacacagctaaggagaaggaagagaggaaaagtgaccatgatgtggcc
aggaaggatgttgtcaagggtctgttaaggatgaaactgctccccaggctacgttacatc
cttgaggtggtccgaccttctcctcgagtggtccaggacgtcctggagatcctgattcgt
atcgctaggcactcctcctcatctgccacccaggtgcttgactgccctcgcttgatggag
atggtgttgtcagagttcctacccacttcctggacagcaccgtctttgccccttcctccc
tctgtgtacggactcccactggccagcaccatgaagctgttaagagttttggctaccgct
ggcagacatgcctgtgccagactgttaaactctcttggagtgagggagcgtctgtcttgt
ctgctgagtgctgagcccagtgagctgctgctggaaccgaccgcggccctcagaatcacc
actgaggcctacaggctgtgggctgttgcagccggctacggacaggccggcaaattatac
atagacctgtatccaggtttagcgaaagccttgcagtccattcacagagtcacggacccc
tcagatcctctgttgcccctgcagctccagcgaatcctggctctgctttctctgctcaca
caggtcacgcacactgctggctgccatcaggagctacaggccggcatggttagctctcag
ggagaacagtgccctcctcctcctccagtgtcttggggtcatgtcacagggctgcaggcc
tccctgttgggacatttgaagggctttgtgaagaaccttgacaacccagttcagaaaggg
aacagcctggctgtgataccagcttacctggtctacctagaagcttactaccatcagctc
ttcagacagggtcctgggatgctggagccaatcccagctgactctgggcaggaggcgaag
tacagcctggacaggacgccagtccatcgcaggaaggaaaaaaactgtttccagcctgta
gagacccttcaagaactggagctgctaacgtctgaggttctcctcccactgctgtcccac
catgttgttcaaggcctgataaagaaccttaagtcttcctcagttgtttgtaatgaccag
tctagtcatgtgggcccagagaccaatcccagcctgcctggtttggcctgccctggatgg
agggaccgtccggggctggttgttcccagctctcccttcccccttctcacaagcctggcg
ctcctcctggagacaatcacaggcatccacaaaggtctcagctcaaagttcgctggtctc
ctcttgtcagaatctgtggtcggttacctacgaggttgcagtcaggctacgcccaccctg
tctcacaccagagcctggcttctccgacacgaacaccacctcctctacctgttgctccgg
ctggcacacagattggttcctattgtgccagaagtagccaagcatgccccactgtaccac
caggtggcactagttctgctgccatggttattaccaggcagtgaatacctggcacatgaa
ctgctgtccaccatcatcttcagcaaggactttatatcagagggccacagcggaggacct
gaagctgtagagctgggagagctgaaactccaagaggaagcgcagcaccaaacctctccc
tctctccaaactgccggagctctcctgagagaagcctgcgtccagctgccatcaatacga
ggctgcttcctcactcacctggcccacctggagccatccgtactgatgtcccgggacgct
ctgctcggccgtaacccctggatcaactcctatctcctcccagagctcactggtcccacc
gtgccgtctgactggcctttcctcccactcgtcagcctgtatgagcgaacaggggtgtgc
gacggtggagggttagcggtggaggagctcccacagggggctctgcaggctgtgatccac
tgtctgcagtggctgctcctgctggaagtctggagggaggaagcactaaaggtgatccct
cctgtcgccaagctcgcccgcctgtcctgtgtgttcctgtgttccagtgacttgttcctg
gagagacctgttcagaaactgacctggggtctgtgcagattgctgaccaggcagtccagg
ctggattctttggacctgaatgtcccccctccaggtctagcctccttccaggacctgtac
tctgctctgttgacccagtacgaagcagtgtcctttggagaccgcctgtttggctgctgg
gtcctcttacccctgcagaggaggtacagcaccaccatgaagctggctgtatttggagaa
catgtggggatgctgaggtcactgggggtcactctggaacagctctccatccctatcgag
cgcttcacgtctcctcctgaagactccctccctctgctccgtctctacttccgctctttg
gtaacggggaccctgaagccccgatggtgtcctatcttatatgtggttgccttgtctcac
gtcaactccttcatcttctctcaggacgctgcagcacaggaggttgaagcagctcgacac
agtatgctgaggaaaatctactacctgactgatgaggtgttgaggagccacttgctgcac
ttccgtctgccacgacagcactcagagtttggcttcgatatgtacgatcagctgcctccc
attagagcgaaacgtttggagagtgtactgagactgcaggacagcggcgatgacaaagga
gactga
DBGET
integrated database retrieval system
