KEGG   Micropterus salmoides (largemouth bass): 119884338
Entry
119884338         CDS       T07309                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03082  ATP-dependent chromatin remodeling
msam03083  Polycomb repressive complex
msam04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119884338
   03083 Polycomb repressive complex
    119884338
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    119884338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msam03036]
    119884338
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     119884338
  Histone modification proteins
   HAT complexes
    HATB complex
     119884338
   HDAC complexes
    Sin3A-HDAC complex
     119884338
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     119884338
    PRC2.2
     119884338
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     119884338
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119884338
  Chromatin remodeling factors
   NuRD complex
    119884338
   NuRF complex
    119884338
   NuRF complex (fruit fly)
    119884338
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 119884338
NCBI-ProteinID: XP_038550698
LinkDB
Position
Unknown
AA seq 425 aa
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI
KISHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDASGECRPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTVCLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTD
PEAAT
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcggacaaggaagcaggtgcatttgatgatgcagttgaagagagggtgatcaatgag
gagtacaagatctggaagaaaaacactcccttcctgtacgacctggttatgacccatgcc
ttagagtggcccagtcttactgctcagtggctgcctgacgtctccaggccagaagggaag
gattacagtgtgcaccggctggtgttgggcactcacacatctgatgagcagaatcacctg
gtcattgccagcgtccagctgcccaatgatgatgcccagtttgacgcctcacattatgac
agcgagaaaggagagtttggaggttttggctccgtaagcggaaagatcgagatagaaatc
aagatcagccatgaaggagaggtgaatcgtgcccgctatatgccccagaacccttgcatc
atcgccaccaagacccccacctcagatgtgctggtgtttgactacaccaaacacccctcc
aagccagatgcttctggagagtgccgccctgatctgcgtctcagaggccatcagaaagaa
ggctatggtctctcctggaatcccaatttgtctggctcactactcagtgcttcagatgac
cataccgtctgtctgtgggacataagtgctgtgccaaaggaggggaagatcgtcgatgca
aagactatcttcacaggtcacactgctgtggttgaagatgtttcctggcacttgctacac
gagtcactctttggatctgtagcagatgaccagaagcttatgatttgggacactcgttca
aacaacacctccaaacccagccatgcagtagacgcccacacagcagaggtcaactgtttg
tcatttaacccttatagcgagtttatacttgcctctggatctgcagacaagactgtggct
ctttgggacttgagaaacttgaaactgaagctgcattccttcgagtcacacaaggacgag
atcttccaggttcagtggtcaccccataatgagaccatattggcatccagtggaacagac
cgtcgactgaacgtctgggacctcagtaaaattggagaggagcagtcaccagaagacgca
gaggatggcccacctgagctcctgtttatccatggaggccacacagccaagatctctgat
ttctcctggaaccccaacgagccctgggtcatctgctcggtctctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaacgatgaagatccggagggttcgacagac
cctgaagctgcaacctaa

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