Micropterus salmoides (largemouth bass): 119884382
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Entry
119884382 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: deubiquitinating protein VCPIP1-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119884382
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119884382
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119884382
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C64
119884382
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
119884382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
119884382
NCBI-ProteinID:
XP_038550731
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MSLLQSSKKKDKRILSGTCPDPKCQARLFFPAYGSVSIECTECGQRHEQKNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRYGMDKQTGKAKLLR
DMNQGEMFDCSLLGDRAFLIELDHVSTMGYGKDRSGSLIYLHDTLEEIKKANGNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDII
XECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCSGKDGKLNKPICIAWSSSGRNHYIPLVGIKNTVLPKLPARLLPKAWGVPQELIRKYIK
LEQDGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKHSIHPSLVADVHQYVYRRTGVIGIQP
EEVTEAAKKSVMENRLHRCLICGALSELHVPPEWLVPGGKLYNLAKSTHGQLRQDKNYSF
PLNNVVCSYDPQRDVLTPDYKLSSLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTQSQGG
KCGCGFKHFWDGKEYDNLPEAFPITLEWGGRVVRETVYWFQYETDPTLNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPDEYNPVSIDGAHVQRLTDTAETQQVADAQP
PTKIILTGQKAKTLHKEELTMSRAERSIQQSISEQALVTQKRRTDKLKQEQQKGHGRTSS
PGGSPETSSSSAPVTPTKSSSSPSSSNKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIA
NQFGVPPPQQCIRYGFPPKELVPPKDGEENEPVALQHGDRVTVEILRGPEEKSPAASIPR
ASSSHSALHSVKSEDAVTSGRMSNRELQDNIDLEMSSLCLLATLMGEDVWSYAKKLPHLF
QQGGVFYNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEERLELCVDAAGHFPVGPDVEEL
VKEALVQLRSEAATRGSREGSPSHGVLRLGSGGVVRKKEQLQNVTAFQGKGHSLGSSGGS
SPPEHRPITRQHSSGVDLSASVSRGPPDLSDIPEDATRELVRMAPGFVTMKDGRGLDPSL
MEQQRRKLQEMVSSIQASMERHLREQQQQSAAAAGGGASQELTGGTKTGAGQPTSTVDHE
PPAAAGATAAGKPDRKAEELEEMESQDAEQSNAFEPMDHS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgcagagctcgaagaaaaaagacaagcgtattttgtctggtacctgccca
gacccgaaatgtcaggcgaggctgttcttccccgcttacggctccgttagcatcgagtgc
acagagtgtggtcagcgccacgaacagaagaacctgttaaatgtcgaggaagtgactgat
ccagatgttgtgctccacaatctgctcagaaacgccctgctcggcgtcaccggggccccg
aagaaaggcacggagctggtgaaagtaatggggctctctaattaccactgcaagctcctg
tccccggtgctcaccaggtacgggatggataaacaaaccggcaaagccaagctgctgagg
gacatgaaccaaggggagatgtttgactgctcgctcctgggggacagggcttttctcatc
gagctggaccatgtttccaccatgggctacggcaaggacaggtcagggagcctcatatac
ctccacgacaccctggaggagatcaagaaagccaacggcaacagggagtgcctcatcccg
gtccacgtagatggagacgggcactgcctggtgcacgctgtgtccagggcgctggtgggc
agagaactgttctggcacgccctgagagaaaacctgaaacagaactttaagcagaacctg
gaccgctataaggctctctttcaggattttatcgatgctgcagagtgggaggacatcatc
naagagtgcgaccccctcttcatcccgcccgaaggcgtgccgctcggactacgcaacatc
catatattcggcttagccaacgttctgcaccggcccataatcctgctggactccctgagt
gggatgaggagctctggcgattattcggccaccttcctgccggggctggtgcccgaggag
cagtgcagcgggaaagacgggaagctcaacaaacccatctgcatcgcctggagcagctcc
ggccggaaccactacatccccctggtgggaatcaagaacactgtgctgcccaagctgccg
gcccgcctgctgcccaaggcgtggggcgttcctcaggagctcatcaggaagtacatcaag
ctggaacaagacgggagctgcgtgatcggcggcgaccgcagcttgcaggataaatacctg
atgcggctggtgaacgccatggaggaggtgttcatggaaaagcacagcatccacccgtcg
ctggtggctgacgtgcaccagtatgtctacagacggaccggcgtgatcggcatccagcct
gaggaggtgacggaggcggctaagaagtcggtgatggagaaccggctgcaccgctgcctc
atctgcggcgccctctctgagctccacgtcccgccggagtggctggttcctggtgggaag
ctctacaacttggccaagtccactcacggccagctgcggcaggacaagaactacagcttc
cccctcaacaacgtggtctgctcttatgacccccagagggacgtcctcacaccagattat
aaactgagctccctcaacacctgcaactggtgtcatggcacgtcggtgcgccacatccac
ggcaacgggtccgtggtgtacctggacggggacagaaccaacacccagtcccagggaggg
aaatgtgggtgtggcttcaagcatttctgggatgggaaggagtatgacaacctcccggag
gccttccccatcacgctggagtgggggggtcgggtggtgagagagacagtatactggttc
cagtatgagacggacccgactttaaacagcaacgtgtatgacgtggcgatgaagctggtc
accaagcacttcccgggggagtttggcagcgagatcctggtgcagaaagtagtcaacacc
atcctgcatcacaccgccaagaagaacccggacgaatacaacccggtgtccatcgacggg
gctcatgtccagcgcctcaccgacaccgcggagactcagcaggtggcggacgcgcagccg
cccactaagatcatcctgactggtcagaaagcgaagacgctccacaaagaggagctgacg
atgagccgagcggagcgcagcatccagcagagcatcagcgagcaggccctcgtcacccag
aagagacggactgacaagctgaagcaggagcagcagaagggccacggcaggacgtcttcc
cccggtgggtccccggaaacctcgtcctcttcggcgccggtcacgcccaccaaatcctcc
tcctccccctcctcgtccaacaaggagaagaagatccgcgtgaccaccagtgacggcagg
caggccatgctgaccctgcaggcccagaccaccttctcagagctgcagaggagcatcgcc
aaccagttcggcgtgccgccgccgcagcagtgcatccgctacggcttcccgcccaaagag
ctggtcccgccgaaggacggcgaggagaacgagccggtggcgctgcagcacggcgacagg
gtgacggtggagatactgaggggccccgaggagaagagccccgcggcctccataccccga
gcctccagctcgcactccgccctgcactcggtgaagagcgaggacgccgtgacgtccggc
aggatgagcaaccgggaactccaggacaacattgaccttgagatgtcctccctctgtctc
ctagcaaccttgatgggcgaggacgtttggtcgtacgcaaagaagctgccgcacttattc
cagcagggcggcgtcttctacaacatcgtcaagaaagacatgggcctgatggacgggaag
cactgcacgctgcctcatctgacggggaagacgtttgtttataacgcggcagaggagcgt
ctggagctctgcgtggacgccgccgggcacttccccgtcggccctgatgtggaggagctg
gtgaaggaggctctggtccagctgcgctcggaggcggccaccaggggcagcagagagggg
agcccatcccacggcgtgctgcggctgggcagcggcggcgttgtccgtaagaaggagcag
ctgcagaacgtcaccgccttccagggtaaaggccactctctgggcagctctgggggctcc
tcccctccagaacaccggcctatcacgcgccagcacagcagcggcgtggacctgagcgcc
agcgtgtcccgaggccccccagacctgtctgatatccccgaggacgccaccagggagctg
gtccgcatggctccgggcttcgtcaccatgaaggacggtcgtggtctggaccccagcctg
atggagcagcagcggaggaagctgcaggagatggtgtcgtccatccaggcctccatggag
cgccacctcagagagcagcagcagcagagtgccgccgcagcagggggcggggccagccag
gagctgacaggcgggacgaagacgggcgcgggccaaccgacgtctaccgtcgaccatgaa
cctccagctgcagcaggcgccacggcggccggcaaaccggacaggaaggcggaggaactg
gaggagatggagagtcaggatgcggagcagagcaacgccttcgaacccatggatcactcc
tga
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