Micropterus salmoides (largemouth bass): 119884458
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Entry
119884458 CDS
T07309
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msam03009
]
119884458
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119884458
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
90S particles
Helicases
119884458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Laminin_B
EutA
Motif
Other DBs
NCBI-GeneID:
119884458
NCBI-ProteinID:
XP_038550792
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MAEFSSLGLSDWLVKQCKQLGINKPTPVQENCMPAILQGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIIVGGMDMVSQALELSNQ
PHVVVATPGRLADHIRSSDTFSMSKIQFLILDEADRLLEQGCTDFTKDLETILGILPAKR
QTLLFSATLTDTLHELKNIAMNKPYFWESKSETRTVEELDQRYILTPEKVKDAYLVHLIQ
KFTDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQKQRFANLAKFKASVFK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
HSIEEQNKTKLKEYPVEEKEVLKILTQVNVTRRECEIKLESTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELEKIRSQKKRFKQKIQESIQKQKRGQLKKKLMKRKLMKKKKAAQATV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttttcgtcactgggtctctcagactggctggttaagcagtgtaaacagctg
gggatcaacaaacccactcctgtacaggagaactgcatgccagcgatactacaaggtcgg
gactgtatgggctgtgctaaaacaggaagtgggaaaacggcagcatttgtgctgccagtg
ctgcagaagctgtcagaggacccatatggcatcttctgcttggtgctcactcccaccagg
gagcttgcctatcagattgcagagcagtttcgagtcctggggaagcctctgggtctgaga
gactgcatcatcgtcggtggaatggacatggtgagccaggccctggagctgtccaaccaa
ccacacgtggtcgtggcgacgccgggccgactggctgatcacatccgcagctccgacacc
ttcagcatgagcaagatccagtttctgattttggacgaggcggaccggctgttggagcag
ggttgcaccgacttcaccaaagatctggaaacgatcctgggaattttaccagctaaacgg
cagacgctactgttcagcgccacactcactgacaccctgcatgagctgaagaacattgcc
atgaacaaaccttacttctgggagagcaaatcggagacacgaacagtggaggagctggac
cagaggtacatcctcactccagagaaggtgaaggacgcctacctggtccacctgatccag
aagtttactgacgagcatgacgactggtccatcatcatcttcaccaacacttgcaagagc
tgccagatcctcaccatgatgctgcgggaatttaattttccgaccatctcactgcactcc
atgatgaaacagaaacaacggtttgcaaacctcgccaagttcaaggccagcgtcttcaaa
atcctgattgcgacagatgtggctgccagaggtttggatattccaactgtgcaggtcgtc
attaaccacaacacccctggccttcccaagatctacatccacagagttggacgaacagca
agagcagggaggaatggagtttccatcacactggtgacacagtacgacatccacctggtc
cactctatcgaagaacagaacaagacgaagctgaaagaatatcctgtggaggagaaagaa
gtcctgaagatactgacccaggtcaatgtgacaaggcgggagtgtgaaattaaacttgag
tcaacagattttgatgagaaaaaggagatcaacaagaggaagcagctgatcttggaagga
aaggatccagacctggaggctaagaggaaagccgaactggagaagatcaggagccagaag
aagcggttcaaacagaaaatccaggagagcattcaaaaacagaaacgtggacagctgaaa
aagaaactcatgaagagaaaactgatgaaaaaaaaaaaggcagcgcaggcaacggtgtga
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