Micropterus salmoides (largemouth bass): 119884489
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Entry
119884489 CDS
T07309
Name
(RefSeq) mRNA-decapping enzyme 1B-like
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119884489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119884489
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119884489
mRNA degradation factors
5'-3' decay
Decapping complex
119884489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
119884489
NCBI-ProteinID:
XP_038550819
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MKILAQQEQVLVQSQGGWLSPEGGRGGEIVGGGSEAKSVDIIQMLTKARTEYDKGQSTSE
PKEIGGSSVLSGNPNLIKPIPVKPNTQDSEGTEPKSLSLATLFGSQYQHHHSSKPDLVSP
LATPGTASSTVTAARPPVARTLTYEDTVNSARSVTSKGGNVVMAGFSDRGLRDGGNVVAG
LLPSPTTAHQQQQQQNQPQHCPAIQKLMQGQRGVLQTLSESPENRLCDNGVQLEHHHHHH
HMYHHHHQQHHHHHHQKQQLDPIQRLFQIQPPPPSSNPPPLLQKPHLSSQPVMVDSVSCS
HHHTQQTQQLFFSLSKPQPEAQHNSQSASTIPGPGLSSQMPGVVSPHELLQKLQLVQQEQ
SLASHDLPRLAARFLGPSHGQGAGSVVGPVPNQTTVAQKATQQFQVISPQRIPATVAPIL
LLSPSVFTQAKSSGGLSAVAQESCPVPSTLSRPPLQEEGRVLSRNQLQATLLRLIQTDSS
FLDTIYEAYISRLANDSSSKY
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctggcccagcaggagcaggtcctagttcagtctcagggtggatggttgtcc
cctgaaggaggacggggaggagaaatagtcggaggaggaagtgaagcgaagtcagtggac
atcatccagatgttgaccaaagcacggacagagtatgataagggccagtctacatcagag
ccaaaggagattggtggcagcagtgttctttctggaaaccccaacttgatcaaaccaata
cctgttaaaccgaacactcaggacagtgaaggtactgaacccaagtctctctctctggcc
actctttttggctctcaatatcagcaccaccactcatccaaacctgacctagtctctcct
ttggccacccctgggacggcgtcatcaacggtaacagccgctcggccacctgtagcccgc
acgctgacatatgaggatacagtgaactctgccagaagtgtgacctccaagggagggaac
gtcgtcatggctgggttttcagatagagggctcagggatggtggaaacgttgttgcgggc
ttgctgccgagccccactaccgcccatcagcagcagcagcagcagaatcagccacagcac
tgcccagccatccagaagctcatgcaaggacagagaggggtgcttcagaccctgtcagag
tcccccgagaacaggctgtgtgacaacggggtgcagctggagcatcaccaccaccatcac
catatgtaccaccaccatcatcagcagcaccaccaccatcatcatcaaaagcaacagctt
gacccaatccagagacttttccaaatccagccaccacctccctcctccaaccctcctccc
ctgctgcagaagccccatctctcttcccagccagtaatggtggattctgtgtcatgttcc
caccatcatacgcaacagacccagcagctatttttcagcctatctaaacctcaaccagag
gcacagcacaatagccagtcagcctcaactataccgggaccaggcctgtcttcccagatg
cccggtgtggtgtcgcctcatgagctcctgcaaaagctccagctggtccagcaagagcaa
agcctggcttcccatgatctccctcgactggccgctcgatttctgggacccagtcatggt
caaggtgctggctcagttgtaggtccggtccctaaccagaccactgtagctcagaaggct
acgcagcagtttcaggtgatctccccgcagcggataccagccactgtggcccccatcctg
ctcctctctcccagtgtgttcactcaggcaaaatctagtggtgggttatcagcggttgcc
caggagagctgccctgtcccctcaactctgtccagacccccgctgcaggaagagggcaga
gttctgtccagaaaccagcttcaagccacgctgctccgtctgatccagactgacagctca
ttcttggacaccatctatgaagcctacatcagccgcttggctaacgactcaagcagcaag
tactga
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integrated database retrieval system