Micropterus salmoides (largemouth bass): 119884842
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Entry
119884842 CDS
T07309
Name
(RefSeq) tripartite motif-containing protein 45-like
KO
K12021
tripartite motif-containing protein 45
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119884842
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119884842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Invasin_D3
Ig_GEX2_N
Snapin_Pallidin
ANCHR-like_BBOX
DUF3244
Motif
Other DBs
NCBI-GeneID:
119884842
NCBI-ProteinID:
XP_038551069
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSQSEQKENTEQPKLSSENEHSGFLVNPRAVCNACKRLYRDPKILPCLHTFCSDCVGRLE
PFSVSSRRGEEAVEEDRPAVTVTVLCPDCDSEVDIPPSGPEGLSTDHLALDEVFLETLAT
DGPLGCDLCGEGGAESRCEVCCVNLCEFCCQAHRRQKRTASHSVQCLEELKSRGRLCRPV
LCSLHPGQELRLFCQPCDLPVCLECAATLHRDHRCCPTRDVIDRHGDRIRELVTVRLRPR
LERLKDSLQKVEVAQETLQARVDATANEVRAFARAYASAVESHCLSLLHCLEDVRVQRRN
QLHLQRAQLQQALLDIGGGVEFAERLLSCGSDAEILSAKGVTLRRLTSLAESSYDPHPAT
APPDDGSSISFMPREPAGDLEGYPVVGVINSKTVDLSKCTIEGEGLQRGRDGQQGHFTLV
CRDSAGEQMTRGGEQVLVSVVHKEKKNCTVEATVVDNNDGSYSISYTPEEPGAYSVWVCV
KAQHVKGSPFILDVKRKLRRHRGTFHCCSFCSSGGAKEARCGCPGTMPGGFKGCGHSHKG
HPGKPHWSCCGSTVERSECLPQSVLDAVSPRGHLRTVEL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtctgaacagaaagaaaacacggagcagccaaagttaagctctgaaaatgaa
cacagcgggttcttggtgaacccgagagcggtttgtaacgcgtgtaaacgcttgtaccgg
gaccctaaaatcctcccttgtctgcacaccttctgctccgactgtgtcggccggctggag
ccgttctctgtgtcttcgcgcagaggcgaagaagcggtggaagaggaccgacccgccgtc
accgtcacggtgctttgccccgactgtgactccgaggtggacatccctccttcgggaccg
gaagggctgagcaccgaccacctggcgctggacgaagtattcctggagaccctggcgacg
gacggcccgctgggatgcgacctgtgcggtgaaggaggcgccgagagccgctgcgaggtc
tgctgcgtcaacctgtgcgagttctgctgccaggcgcacaggcggcagaagcgaacagca
tctcactctgttcagtgtctggaggagctgaagtctcgtggtcgtctctgccgccccgtc
ctctgctctctccaccccggccaggagctccggctcttctgtcagccctgcgacctgccc
gtctgcctggagtgtgccgccacactgcaccgcgaccaccgctgctgccccacccgggat
gttatcgatcgtcatggagaccgcatccgagagctggtcacggtgcgcctgcgaccccga
ctggagcgtttaaaggactcgctgcagaaggtggaagtagcccaggagactttgcaggca
cgggtggatgcaacagcgaacgaggtgagggcgtttgcgcgagcctacgccagcgctgtg
gaatcccactgcctctctctgctgcattgcctggaggacgtccgtgtgcaacgcaggaac
cagcttcacctgcagagggcacagctgcagcaggctctgttggacattggaggcggagtg
gagtttgcagagagactgctgagctgcgggtcagacgctgagatcctcagcgccaaagga
gtgaccctgagaagactgaccagcctggcagagagcagctatgacccccacccggcaact
gcccccccagacgacggcagcagcatcagcttcatgcccagggagccagcgggggatttg
gagggctacccggtggtcggggttattaactctaagacagtggacctcagcaagtgcacc
atcgaaggggaaggtctacagaggggcagggatgggcagcagggccacttcaccctggtg
tgccgggactcagctggggagcagatgacacgaggtggagagcaagtcttggtcagcgtc
gttcacaaggagaagaaaaactgcacagtggaggcgacagtggttgataacaatgatgga
tcctacagcatttcgtacacacctgaagagccaggtgcctactcagtgtgggtttgtgtc
aaagcccaacatgtcaagggttctccgtttattctagatgtgaagagaaagttgaggcgt
caccgtgggacgtttcactgctgctccttctgctccagtggaggagccaaggaggctcgc
tgtggctgcccaggaaccatgccaggaggattcaaaggttgcggtcacagtcataaagga
caccctgggaagccgcactggtcttgttgtggcagcaccgtggagcggtccgagtgtttg
cctcagagcgtgttggatgcagtttccccccgcggccacctgcgaactgtggagctctga
DBGET
integrated database retrieval system
