Micropterus salmoides (largemouth bass): 119885091
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Entry
119885091 CDS
T07309
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
msam04137
Mitophagy - animal
msam04144
Endocytosis
msam04340
Hedgehog signaling pathway
msam04350
TGF-beta signaling pathway
msam04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119885091 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119885091 (smurf1)
04350 TGF-beta signaling pathway
119885091 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119885091 (smurf1)
04137 Mitophagy - animal
119885091 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
119885091 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119885091 (smurf1)
04121 Ubiquitin system [BR:
msam04121
]
119885091 (smurf1)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119885091 (smurf1)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119885091 (smurf1)
Membrane trafficking [BR:
msam04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119885091 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
119885091 (smurf1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
HECT type E3
119885091 (smurf1)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119885091 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119885091
NCBI-ProteinID:
XP_038551261
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQVKESSQAPQMDVGGEEVGGGGMGGGGGGGGGGVGGSDGDVAARYERDL
VHKLKLLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGL
DYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGL
AVFHGHYINGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVE
HNAFGKFLQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQH
LLKPFDHKELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFTEERRGRLL
QFVTGSTRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYE
KLYEKLLTAVEETCGFAVE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggagaaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaagtt
gtggtggacggatcgggtcaatgccactctacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacataggaaagacagactccatcacaatcagtata
tggaaccacaagaagatccataaacggcagggggcgggcttcctgggctgcatacgactt
ctttccaatgccatcagcaggctaaaagacacaggataccagcgtctagatctatgtaag
ttgaatccctcggacagtgatgcagtgcgggggcagattgtagtgagcttacagacgcga
gaccgcatcggcagtggaggccccgttgtggactgcagaggactgttggaaaacgatggg
ccggtgtttgagggatgtttcagcgaagagccactgccctactctgaccccactggtgcg
gcggggggtgggaactgtcggcttgactcacccagtcaagagggtcgtcttcagacacag
cgaatcagaggacaggactctagaggccatggccacacccctcagaacagacctcatggg
caccaaccgcctgacctgcccgagggatatgagcagcgaacaacagtgcagggccaggtg
tacttccttcacacgcagacgggtgtcagcacctggcacgaccctcggataccgcgggac
ctggccagtgtgagctgcgaggagcttggcccgctgccagtgggctgggaggtccgaagc
actgtgtctggccggatctactttgtggaccacaacaaccgaaccacacagttcacggac
ccgcgcctacacacaataatcagtcagcaatcccaagtgaaagaatcctcccaagccccc
cagatggatgtggggggtgaggaggtgggaggtggaggaatgggcggcggcggtggagga
ggaggaggaggagttggaggtagtgatggagatgtggctgcacgctatgagagagacctg
gtccataagttgaagctgctccgccatgagctgtccttgcagcagcctcaagcaggacac
tgccgcatagaggtgtcccgagaggagatctttgaggagtcgtatcgtcagataatgaag
atgagacccaaagacctgaagaagcgtctaatggtgaagttcaggggagaggagggtctg
gactacggcggggtggccagggagtggctgtacctgctgtgtcatgaaatgttgaacccc
tattacggcctgttccagtactccacagacaatatctacacactacagatcaaccccgac
tcctccatcaaccctgaccacctgtcatatttccactttgtggggcgcgtgatgggcctg
gcagtttttcacggtcactacatcaacgggagcttcacgctgcccttctacaaacagctg
ctaggcaaacccatccagctcaacgacctggagaccaccgacccggagttgcacaagagc
ctcgtctggatattagagaatgacatcacctcagtccttgaccacaccttctgcgtggag
cataatgcttttgggaagttcttacaacacgaactcaaacctaatggccgtaatatccct
gtcactgaggagaacaaaaaagaatatgtaagactttatgtgaactggaggtttatgcgt
ggaattgaagcccagtttctggctcttcagaagggattcagtgagctcatcccccagcac
ctcctcaaacccttcgaccataaagaacttgagttgatcatcggtggactggggaagata
gatctcgcagactggaagactaacacgcgcctgaagcactgcacaagtgaaagcaatgtg
gtgcggtggttctggcaggcggtggaggccttcaccgaggagaggagagggcgcctcctg
cagtttgtcacgggctccaccagggtccccttacaggggttcaaagcgctgcagggttct
acaggttctgcaggaccaaggctcttcaccatccatttgatagacgccaacacagacaac
ctgcccaaggcccacacgtgttttaaccggatagacatccctccctacgagtcttacgag
aaactttacgagaaactgctgacggctgtggaggaaacctgcggcttcgctgtggagtga
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integrated database retrieval system
