Micropterus salmoides (largemouth bass): 119885366
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Entry
119885366 CDS
T07309
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00260
Glycine, serine and threonine metabolism
msam00630
Glyoxylate and dicarboxylate metabolism
msam00670
One carbon pool by folate
msam01100
Metabolic pathways
msam01200
Carbon metabolism
msam01230
Biosynthesis of amino acids
msam01240
Biosynthesis of cofactors
msam04981
Folate transport and metabolism
Module
msam_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119885366 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119885366 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119885366 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119885366 (shmt1)
Enzymes [BR:
msam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
119885366 (shmt1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
119885366
NCBI-ProteinID:
XP_038551321
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSITNGHTLSKETWDSHNKMMLEPLSISDSEVFTIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSEKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPRLIIAGVSCYSRNLDYARMKQIANENSAYLMADMAHISGLVAAGVV
PSPFECCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQMQVLANCKALSSSLIDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVEDDFRKVA
EFIHRGIVLTLEVQRSLDPKATLKEFIHALAQGEKFQQQVAEIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccataacaaatggccacactctgagcaaagaaacgtgggattctcacaacaagatg
atgctggagcctctgtccatcagcgactctgaggtgtttaccatcataaaaaaagagaag
cacaggcagacgtacggtctggagctgatagcgtctgagaactttgccagccgagctgtt
ctagaggctctgggttcctgtatgaacaacaaatactctgagggatatcctggtcagaga
tactacggtggtacggagcatgttgatgagctggagagactctgtcagaaaagggcgctg
gaggcatatggtctggactcagagaaatggggtgtcaatgtgcagccatactcaggttca
cccgccaactttgctgtctacacggccgttgttgagccacacggcaggatcatgggacta
gaccttcccgacggaggtcacctgacacacggcttcatgactgagaagaagaaaatctca
gcaacgtccatcttctttgagtccatgccgtataaggtgaatccagaaactggctacatt
gactatgacagactgcaagaaaacgctcggctgttccaccccagactcatcattgcagga
gtaagctgctattcccgcaaccttgactacgcccgcatgaagcagattgctaatgagaac
agtgcgtatctgatggcagacatggctcacatcagtggattggtggctgctggagtggtg
ccctcaccctttgagtgctgcgacattgtttccacgacaacacacaagacgctgcgtggc
tgccgcgctggactcatcttctacaggaaaggagtgcggagtgtggatgccaaggggaag
gagactctctacaacttggagtctttgatcaatcaagctgtgtttcctgggctgcaggga
ggaccacacaaccacgcaattgcaggtgttgctgtagctctcaagcaagccatgacacca
gagttcaaggcctaccagatgcaggttcttgctaactgcaaagctctgtccagttcactt
attgaccacggctacaagattgtcacgggcggctcggacaaccatctgatcctgctggac
cttcgcagcaaaggaactgatggaggacgagctgagaaggttttggaagcctgtgccatc
gcttgtaataagaacacctgtccaggggataagagcgctttgcgccccagtggtctgagg
tttggctccccggctctgacctccagaggcttggtggaagatgacttcaggaaggtggct
gagttcattcacagaggtattgtgctgactttggaagtgcagagaagcctggatcccaag
gccacgctgaaggagttcatccacgctctggcccagggagagaagttccagcagcaggta
gcagaaatcagggcagaggtggaggcgtttgctggtcagttccccatgcctgggctacct
gagctgtag
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