Micropterus salmoides (largemouth bass): 119885390
Help
Entry
119885390 CDS
T07309
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119885390
Spliceosome [BR:
msam03041
]
Common components
Common spliceosomal components
General mRNP proteins
119885390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
RRM_5
RBD_DEAH11
PRP38_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
119885390
NCBI-ProteinID:
XP_038551337
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MISRQFALAITAGLPVCLRHSDHGVSSGGQRLKNLTGTRTERPSAGCYPPLCVQVILILT
ETHLSERSRQVFRLMVSLCVQSSSSRMADDLDIEAMLEAPYRKEDAKASSPNGQEDRTKR
KKRSRDRKRSRSRDRKRSRERKRSRSRDKRRSRSRERRGSRERGGRYRDHHKHRRRSKSK
SPFKKEKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDR
NSRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSG
PMRLYVGSLHFNITEEMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFADAECAKKAL
EQLNGFELAGRPMKVGHVTERTDAATASSFLDNDDMERSGVDLGTTGRLQLMARLAEGSG
LQIPPAAQQALQMSGAIAIGAMAAVSAAMNPTLNMNSAALNLPSQPLATHCFQLSNMFSP
NREEASGWETEIQHDVIEECNKHGGVVHIYVDRNSAEGNVYVKCPSIPAAMAAVNALHGR
FFAGKMITAAYVPLPTYHNLFPESATATQLLAPPPRR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgcggcagttcgctctcgcgataacagccgggctccctgtatgcctgcgccat
tcagatcatggagtctcgtcgggagggcagcggctgaagaacctgaccgggacccggacc
gagcgaccgtctgcgggctgttaccctccgctgtgtgtccaggtgatcctgatccttact
gagacacacctgtctgaaagatcccgacaggtgttcaggttgatggtttcactgtgtgta
cagagcagcagcagcaggatggcagatgacctggacatcgaggcgatgctggaggctccg
tacaggaaggaagacgccaaggcgtcgagccccaacggacaggaggaccgcaccaagagg
aagaagcgcagtcgcgataggaagcgcagcaggagtcgagacaggaagaggagccgcgag
cgtaaacgcagccgcagccgagacaaacggagaagccgcagcagagagcgccgcggcagc
agggagaggggggggcgctacagagaccaccacaagcaccgtcggcggtcgaagagtaaa
agtcccttcaagaaggagaagagtccaatcaggcagcccatcgacaacctgactccagag
gaacgagacgcccggaccgtcttctgcatgcagctggcagccaggatacgacctcgagac
ctggaggacttcttctctgctgtggggaaggttcgggatgtgaggatgatctctgacagg
aactcgcgcaggtcgaagggcatcgcctacatcgagtttgtggaggccagttcagttcct
ctggccatcgggctgacggggcaaaggctgctgggagttcccatcatcgtacaggcctca
caggcagagaagaatcgagcagcagcagccgccaacaacctgcagaagggatcgtcgggt
ccgatgaggctgtacgtcggctcgctgcatttcaacatcaccgaggagatgttgagagga
atctttgagccgtttggacggatcgagagcatccagctgatgatggacagcgagacgggg
cgttctaaaggctacggcttcatcacctttgcagatgccgagtgtgctaaaaaggctctg
gagcagctgaacggcttcgagctggcgggtcgacccatgaaggtaggtcatgtgacggag
cggaccgacgccgccacggcttcctctttcctcgacaacgacgatatggaacgcagcggc
gtcgacctcggaaccaccgggcgactgcagctgatggcccgactcgccgagggttcaggt
ctacagatccctcccgctgctcagcaggctctgcagatgagtggagcgatcgccatcgga
gccatggctgctgtgtcagctgccatgaacccgactctcaacatgaactctgctgctctg
aatcttccttctcagccgctcgccactcactgcttccagctgtccaacatgttcagcccc
aacagggaggaggcttctgggtgggagacggagatccagcacgatgtcatagaggagtgt
aacaaacatggaggggtcgttcacatctacgtggacaggaactctgctgagggaaatgtc
tacgtcaagtgcccgtccatccctgctgccatggccgccgtcaacgctctacacggaaga
ttctttgctggtaagatgatcacggcggcgtacgtccccctgcccacctaccacaacctg
ttcccagagtccgccaccgccacacagctgctggccccgcctccgcgacgctga
DBGET
integrated database retrieval system
