Micropterus salmoides (largemouth bass): 119885475
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Entry
119885475 CDS
T07309
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119885475 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119885475 (taf4a)
03036 Chromosome and associated proteins [BR:
msam03036
]
119885475 (taf4a)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119885475 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
119885475 (taf4a)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119885475 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
119885475
NCBI-ProteinID:
XP_038551445
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MDVSTASTDSTGQDPGKPLAVSSGVTSLPIQQGKLGSHSVQTFNGSQTMNFHNSGSAAAL
GGTTVTSGTGDSSSTAVSVTAANSGTVMSKGLASAIMPPSSNSVIQTPLMISQSVVASAQ
PVSQTAGPTVTLVRPPMQTAGSGATLNGNNNASPAVAANTGQTSIVVQPTHVNNSQPSSA
GSHIIKAEPPTTIIQTAPQSAVTPGAVSAPRITATGAAGPAGIRALTPQMLAPRLSQTSP
GQPSIHNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMPPRTATPTNVPPGQAPG
NTIISRQVAPSTIIRQGCPAPTSLAATTALHRPPILQSSVGATVTGMTPRTISQAAGTTV
TSVTMSKETLENVKKCKNFLSTLIKLASSGKQSTETAASVRELVKELLEGKLEAEEFTST
LYKELKSSPQPYLVPFLKKSLPPLRQLTPDAEAFIQQSLLPQPASSPVSSTSTTPTTVVL
GSPVPHLTAPVSRPQLQPGISKPGQTPTLVLQPQQQRAILRPQVALPTTPMVTLRNQAPG
RIMVGQQQVHLKELQPVSVRPEVPPVSRQVYAAALTPAQKNKLKEAGGTFKDDDDINDVA
SMAGVNLSEESANILATNSGLVGAVTHSCKDEAFLSCAMLQRRMLEIGRKYGVTDLGAEV
VTYVSHATQQRLQNLLEKVSQVAQQKNVNFKEDDNYEQSSDVRAQLKFFEQLDQLEKQRK
EEQEREILLKAAKSRARQEDPEQLRLKQKAKEMQQQELAQMRQREANLTALAAIGPRKKR
KILDSPSSSAAAEGSGTGPSLSGGAGSSGSRLTRQRVTRVNLRDLLFCLENERFTSRSHF
LYKGFLK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctacggccagcacggactccacgggacaagaccctggcaaaccacttgct
gttagtagcggtgtaacttctctccctattcaacaggggaaactaggctcacactcggtg
cagactttcaatgggagccaaactatgaactttcacaattcaggaagcgctgccgctctc
ggggggacgacagtgacgagcggtactggtgacagcagcagcacggcggtatctgtcaca
gcagccaacagcggaacagtgatgtcaaaagggctagccagtgcgataatgcccccctcg
tcaaacagtgtaattcagacgcctctcatgatctcgcagagtgttgtcgcttcagctcag
cctgtcagccagacagccggacctactgtgactctcgtcaggccgcctatgcaaaccgcg
gggtcgggtgcaactttgaatgggaacaataatgcgagccctgctgttgctgccaataca
ggtcagactagtatcgtcgtacagcccacgcatgtaaacaatagccagccgtccagcgca
ggttcgcacataatcaaggcagagccacccacaacaataatacagacggctccgcagtct
gctgtcactcccggcgccgtcagcgctccccggattacggcaacgggagcagccggtcca
gccgggatccgagccctgacgcctcagatgttggccccaaggctctcacagacctccccg
ggacagcccagtatacataacatccagctccccccggggatggtgcttgtacgcagtgag
agtggacagctgctgatgattcctcagcaggctctggcccagatgcaggcccaggcacag
ggaggcatgccacctcggactgctacaccaacaaacgtgcctcctggccaggctccagga
aacaccatcatcagcagacaagtcgctcccagcaccatcatccgtcagggctgtccagcc
ccgacatcactcgctgccaccaccgctcttcacagacctcctatccttcagagctcagtt
ggggctacagtaacaggaatgacccccaggaccatcagccaagcagctgggaccacagtt
acctcagtaacaatgagcaaagagacattggagaacgtgaagaaatgtaagaacttcctg
tctacattgatcaagctggcatcctctggaaagcagtcaacagagactgcagccagcgtg
agagagctggtcaaggagctgctggagggcaaactggaagctgaggaattcaccagtaca
ttgtacaaagagctcaagtcttcacctcaaccttaccttgtgcctttcctcaagaaaagc
ctcccacccttgaggcagctcaccccagatgcagaggccttcatccagcagagtctgctc
cctcagccggcctcaagtccagtctcctccacctcaaccacccccacaacagtggtcctg
ggcagcccggtcccgcacctcactgccccagtcagcaggccgcagctccagccaggcatt
agcaaaccaggacagacacccacactggttctccagcctcagcagcagagagcaatcttg
agacctcaggtagccttaccgacgacccctatggtgactctcaggaatcaggcccctggc
cgcatcatggtgggacagcaacaggtccatcttaaagagctgcaaccagtatctgtgagg
ccggaggttccacctgtttctagacaagtctatgctgcagccttgaccccggctcaaaag
aacaagctgaaggaggcgggtggcactttcaaagatgatgacgacatcaacgacgtggcc
tccatggccggagtgaacctatcagaggaaagtgctaatatcctagcaaccaattctgga
ctagtgggagcggtgacacattcctgtaaggacgaggcttttctctcctgtgccatgcta
cagaggagaatgctggagatcggtaggaagtatggcgtgacagacctgggcgcggaggtg
gtgacctatgtctcccacgctactcagcagcggctccagaacctactggaaaaagtttcc
caagttgctcagcagaaaaatgtcaatttcaaggaggatgacaattatgagcagagcagt
gatgttcgtgctcagctcaagttctttgagcagctggaccagttagagaaacaaaggaag
gaggagcaggagagagagatcctcctaaaggcagctaagtctcgagctcggcaagaggac
ccggagcagctgcgtctgaaacagaaggcaaaagagatgcagcagcaggagctggctcag
atgagacagagggaggctaacctgacggccttggcagctattggtccgaggaagaagagg
aagattctggactctccatcctcgtctgctgcagctgagggatcaggaacaggtccctct
ctgtctggtggtgctggttcgtcaggctccaggctcacacggcagcgcgtcacacgtgtc
aatctcagggacctgctcttctgcttggagaacgagagatttaccagtcgctcccatttc
ctctacaagggctttctcaaatag
DBGET
integrated database retrieval system
