Micropterus salmoides (largemouth bass): 119885493
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Entry
119885493 CDS
T07309
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119885493 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119885493 (stau1)
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119885493 (stau1)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119885493 (stau1)
mRNA cycle factors
Stress granule specific factors
119885493 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
119885493
NCBI-ProteinID:
XP_038551469
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSQLQFQCSVSPMTAASAPLQLGQPQPGYSIPCASGTLPSESASQPMRSSALPAGSATPY
NTTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQYWEA
EGTSIKKAQHSAAATALAETTLPKPTIRTPRNTGKNPADGMTHTIELSALCMKLGKKPMY
KPIDPYPGMRPPNFNYNVRAPGPYQRSMQQYYYPFPPVGPMIYHMELSIGGQQFVGKGRT
RQLAKHDAAAKALKVLHKEPILQQLPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFVVCVTVGEFTGEGEGKSKKIAKKLAAAAVLGELKRLPHIPSVEKTLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVS
VCGQSAEGMGPSKKVAKRNAAEKMLELLGYKVPQPQPPKPALKTDEKTPVRKPGDGRKVT
FFEPGSVEDVAMGSKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGVCQGSQAKDYSRSMP
NPGKATITAMIANELLYAGTSLTAETILKNKNNLNQLPHGPLTRPSEQLSYLSSVQGLQV
EYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQPNERT
GNGPVSRCGKQEIEGDLHLKQANSSTLAQTLDGTV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccagtttcagtgttcggttagccccatgactgcagcttcagctccactg
cagctgggacagccacagcctggctacagtatcccttgtgcctcgggcaccctaccctcg
gagagcgccagccagcccatgaggagctccgctctccccgcgggctcagccactccctat
aataccaccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgtttcaacaagatccaacctgagtataagctgctttgtgagcaagga
ccagctcactccaagattttctcagttaggctaacactgggagatcagtactgggaagca
gaggggaccagtatcaagaaagcccagcattctgctgctgcaaccgccctcgctgagacg
acacttcccaagcccaccataaggacgccccgcaacacaggcaagaacccagcagatggc
atgacacataccatcgagttaagtgcactatgtatgaagcttggtaaaaagcctatgtat
aagcccatcgacccatacccggggatgagaccaccaaacttcaactacaacgtccgggct
ccaggaccttaccagcgctctatgcaacagtattattacccatttcctccagtgggacca
atgatataccacatggagctttccatcggaggccagcagtttgttgggaagggacgcaca
cggcagttagctaaacacgatgctgctgccaaggccctgaaagtgctgcacaaggagcca
atattgcaacagttgccagtgatgaacggagagcctgaggaggagaacctaaacaaatca
gaaatcagtcaagtgtttgaaattgcacttaaacgcaacttacctgtcaactttgaggtt
ttaaaggaagaaggccctccccacatgaagagttttgtagtgtgtgttacagtcggggag
ttcactggagagggcgaagggaagagtaaaaagattgccaagaagctggcagcagcagcg
gtgctgggagagttgaagaggctaccccatatacccagtgtggaaaagacgctgccacgc
atcaaaaagaaaaccaaatccatcatcaagctgcagaccagcccagaatatggtcaggga
atgaatcccatcagccgtctggctcagatccagcaggccaagaaggagaaggaaccggag
tacagcatggtgacagagagaggtctacctcggcgcagggagtttgtcatgcaggtgtca
gtgtgcggccagtctgctgagggaatgggacctagtaagaaggtggccaaaaggaacgca
gcagagaaaatgctggagcttttgggatacaaagtgcctcagcctcagcctcctaaaccg
gcactgaaaactgatgaaaagaccccagtgagaaaacctggcgatggccgcaaagtgacc
ttctttgagcctggctctgtagaggacgtggcaatgggttccaaggaggaggacttccgt
ctgccttatctgagccaccagcagctgcctgcaggtatcctgcccatggtccctgaggtg
gctcaagcagtcggggtctgccaaggatcccaggccaaggactacagtcgttcaatgccc
aacccaggcaaggccacaatcactgccatgattgccaatgagctgctttatgcagggaca
tcattgactgctgagactatcctaaagaacaaaaataacctgaaccagctgccccacgga
cccctgaccaggccttcagaacagctcagctatctttcatctgtgcagggcctgcaggtg
gaatacaaagattttcccaaaaacaataagaatgaatttgtgtcactgatcaactgctct
tctcagccaccactcatcagtcatgggattgggaaagatgtagaatcctgtcatgatatg
gctgcactgaatatattgaagttgctctctgagttggaccagcagccaaatgaaaggacg
ggaaatggaccagtctctcggtgtggcaagcaggaaattgaaggtgacttgcacctcaaa
caggctaactcaagcacattggcacagaccctggatggcactgtttag
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