Micropterus salmoides (largemouth bass): 119885516
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Entry
119885516 CDS
T07309
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119885516 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119885516 (rae1)
03036 Chromosome and associated proteins [BR:
msam03036
]
119885516 (rae1)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119885516 (rae1)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119885516 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
119885516
NCBI-ProteinID:
XP_038551511
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSLFGTNTGFGTGGTGVFGNTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQTHAGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNQNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgggacaaacaccgggtttgggacaggagggaccggtgtctttggaaac
acaacaacagacagccacaatcccatgaaggatgttgaagtgacttcacctccagatgac
agcatcagctgtctggctttcagtcctcccaccatgccagggaacttcctcattggagga
tcctgggccaatgatgtccggtgctgggaggtgcaggacaatggacagactgtccccaaa
gcccaacagacgcacgcaggtccagtgctggatgcgtgctggagcgatgatgggagtaag
gtcttcactgcttcatgtgataaaacagccaagatgtgggatcttaacagcaatcaagca
atgcagattgcacagcatgagggtccgatcaaatcaatccactggataaaagccccaaac
tacagctgcatcatgactggcagttgggacaaaacactgaagttctgggatacccgctct
cccaatcccatgatgtctctgcagatgccagagagatgctactgtgcagatgttgtatac
cccatggcggtggttgccacagctgagagaggactgatagtgtaccagctggagaaccag
ccctctgagtttcgcagaatagactctcctctcaaacatcagcaccgctgtgtcgccata
ttcaaggacaaacaaaacaagcccacaggctttgcactgggaagtattgagggccgagtg
gccatccactatatcaaccctccaaacccagccaaagacaacttcacctttaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctatgctgtgaatgccatctcc
ttccatcctgtccatggcacactggctactgtgggctcagacgggcgcttcagcttctgg
gacaaagacgctcgcaccaagttaaagacctcggagcagctcgaccagcccattacggct
tgctgcttcaaccaaaatggcaacatctttgcatacgcttccagttacgactggtcgaag
ggccatgagtactacaacccccagaaaaagaattacatcttcctgaggaatgctgcagag
gagctgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system