Micropterus salmoides (largemouth bass): 119885624
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Entry
119885624 CDS
T07309
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03083
Polycomb repressive complex
msam04980
Cobalamin transport and metabolism
msam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119885624
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
119885624
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119885624
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119885624
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119885624
03029 Mitochondrial biogenesis [BR:
msam03029
]
119885624
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119885624
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
119885624
HMT complexes
COMPASS/SET1 complex
119885624
MLL-HCF complex
119885624
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119885624
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
119885624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
fn3
Motif
Other DBs
NCBI-GeneID:
119885624
NCBI-ProteinID:
XP_038551675
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MSVPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSATPSL
PVNSPKSPVPAAAAPSAQSLQQTAVLKVQAQQSATGTSVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTMKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPSTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLT
QVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTG
TVSSSLPGGTVDSSNASLVTPITTLGTIATLSSQVISPSAITVSAAQTSLTSASSLPSST
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSSEAGAAGEGSGTVTLVCS
NPPCETHETGTTNTATTSSATMGAGQVCSNPPCETHETGTTNTATTSSATMGAGQVCSNP
PCETHETGTTNTATTASSNMSVPRECSNPPCETHETGTTNTATTASANMGGVQNVCSNPP
CETHVTGTTNTATQASSNMNTGQTGTAQRVCSNPPRETHETGTTNTPSTASSNMGSDKTN
TATGQVQRVCSSPPYETHKTGTTSTPSAASSNMGSDQTSTATGQVQRVCSNPPYETHKTG
TTSTPSTASSNMGSDQTSTATGQVQRVCSNPPYETHETGTTSTPSTASSNMGSDQTSTTT
GQVQRVCSNPPCETHETGTTNTATTATCTMETGEGTAAQQTEEGAEGTSSTEEAPTTAAP
GVVTTSQGRAITTVTQSTPAPGPSVPSISSITEGASTAASSTEEPMQTDEVASAEAAPAE
QGATAMETQAEVNSDATQSQCWPDILKVHSIKDMLRVYITSNVVFQGEAATATALNLPSE
LMSEGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNESDS
TGESQQTTNIPIMLTQQELAVLVQQQQQLQEAQAAAQQATVDSSLPTEGLAPADSLNDPS
VESNGHNEMAAAVTSAVASLLPRTSAETLAPSSTFAPSVSAASPAKLQAAAALAEVANGI
EGEKQGPQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSHGDDDSGIMPDYSQM
KKMELQPGTAYKFRVAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWE
PPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHID
YTTKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSPDTKATGPKKAR
TDQ
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccctggctccgcggtgtccgggaccacggcgtcggttctgcagccgcgatgg
aaacgggtcctcggatggtccggtccagttccccggcccagacatggacacagagctgtg
gctataaaggagcttatggttgtctttggcggtggaaacgaagggattgtggatgaacta
catgtatacaacactgcgaccaaccagtggtttatcccagcggtccggggtgatattcct
cctggttgtgctgcatatggttttgtctgtgatggcacaagattgctagtgtttggtgga
atggtggagtacggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaaaaagttgaaagcaaaaaacccgaagaatggccctcctccttgtcctcgtctcggt
cacagtttttccctggttggcaacaaatgctacctgtttggtggactagccaatgacagc
gaggaccccaaaaacaacattcccagatacctgaatgatctgtacacacttgagcttcgt
gcaggttccagtgtggttggatgggatattccaatcacatatggagtcttgcctcctcct
cgcgagagccacactgctgtggtgtacacagaaaagacgagcaggaaatctcgcctgata
atctatggagggatgagtggttgtcgtcttggagatctgtggacacttgatattgatacc
ctgacgtggaataaaccatcagtaaatgggacagcaccgctccccagaagtcttcactct
gccactaccatcacaaacaagatgtatgtgtttggaggatgggttcctttggttatggat
gacgtcaaagtggccacacacgagaaggagtggaagtgcacaaacactcttgcctgccta
aatcttgactccatgtgttgggagacagtgttgatggatactcttgaagacaatatcccc
agggctcgtgctggccactgtgctgtggccataaattcgagactctatgtttggagtggc
cgtgatggttatcgtaaagcttggaacaaccaagtctgttgtaaagacctctggtacctg
gaaacagagcggccacacgctcctgccagggtgcagttagtccgtgccaacacaaattct
ctggaggtgagctggggtgccgtctcaactgcggacacctacttactgcagctgcagaaa
tatgacatccctgcaactccagctgcagcctcaccagtcatgagtgcaaccccctcgctg
cctgtgaactctcccaaaagccccgtgccggctgctgcagcaccctctgctcagagtcta
caacagacagctgttttgaaagttcaagctcaacagtctgccacaggcacatctgttgtc
acagtccggcccagccaacctgggaaatcccctgtcactgtgacatcccttcctccaggt
gtcagaatggtagtgcccgcccagaccacccaaggatcgccaattggcagtagccctcag
atgagtggcatggcagctttagctgcagcagctgcagccacacagaagatcccgccctcc
tctgcaggcactgtcctcaatgttcctgcaggtgccaccattctcaaaacagtagctgtt
tcccctggcacaaccacaatgaaggtggcttctccagtcatggtcagtaacccagccacc
cggatgctgaaaactgctgcagcccaggtgggcacagcaactgcgtcctctcccactacc
accagacccatcatcactgtgcacaaatctggtgcagtcacagtggcccagcaggcccag
gtggtaaccactgtggtgggaggagtcaccaagaccatcactctggtcaagagtcccctc
accatgggcagcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaa
accaagccagtgcagacatcagctgtaacaggccaggcttccactaaccctctcacacag
atcatacagacaaagggtcccctcccagctggcaccatcctgaagctggtgacctctgca
gatggcaagcccacaacaatcatcaccacttcccaggcaggaggcacaggaaacaagccc
actatccttaacatcagcggcgtctctcctagcaccactaagcagggcaccaccatcatt
aagaccatcccaatgtcggccatcatgacccagcctggagctacaggtgtgacaagcagc
gcaggcatgaaaacacctatcacaatccttaccacaaaggtgatgactactggaactcct
ggtaaaatcatcactgcagtgcccaaacttgccactgcagctggccaacagggactgaca
caggtggttttgaagggtgctcctgggcagcctggcactattttacgcaccgtgcccatg
agcacagtgggtggtgttcgacttgttacaccagtgactgtctctgctgtaaagcccact
gtcaccactctggttgtcaaggggactactggtgtcaccactcttgggacagtcactggt
acagtctccagtagcctgccaggaggaactgtggacagctccaacgcctctctggttacc
cccatcaccacactgggaaccatcgctaccctgtccagccaggtcattagcccatctgcc
ataactgtgtcagctgctcagaccagcctgacttctgcctcctccctgccttcctctaca
atgacagtgcagaaccagcccacccaggtgactctgatcacaactcccagtggtgtagaa
gctcaaccagtgcaggatctaccagtatccatcctggcctcaccaacctctgagcagccc
agctcctcagaggctggagcagccggagagggctctggcacagtcaccctcgtctgctct
aacccgccctgcgagacccacgagacaggaaccaccaacacagccaccacctcttctgct
acaatgggagcaggacaggtgtgctctaatcccccctgcgagacccacgagaccggaacc
accaacacagccaccacctcttctgctacaatgggagcaggacaggtgtgctctaatcca
ccctgtgagacccacgaaacaggcaccaccaacacagccacaactgcatcttcaaacatg
tctgtgccgcgtgagtgctccaacccaccatgtgagactcatgaaactgggacaactaac
acagctaccacagcatcggctaatatgggaggagtccagaatgtgtgctccaatccaccc
tgtgaaacccatgtgacgggcaccaccaacacagccacccaggcgtcctctaacatgaac
acaggccagacgggcactgcgcagagggtgtgctccaacccaccccgggaaacgcacgag
acggggaccaccaacaccccgtccacagccagctccaacatgggaagcgacaagaccaac
acagcgacaggccaggtccagagggtgtgctccagcccgccctacgaaacacacaagaca
ggtaccaccagtaccccatccgcagccagctccaacatgggaagcgaccagaccagcaca
gcgacaggccaggtccagagggtttgctccaacccaccctacgaaacacacaagacaggt
accaccagtaccccatccacagccagctccaacatgggaagcgaccagaccagcacagcg
acaggccaggtccagagggtttgctccaacccgccctatgaaacacacgagacgggtacc
accagtaccccatccacagccagctccaacatgggaagcgaccagaccagcacaacgaca
ggccaggtccagagggtttgctccaacccgccctgtgaaacgcacgagactgggacaacc
aacacagccaccactgccacctgcaccatggagacaggcgaaggcacagcagcccagcag
acagaggagggagcagaaggtaccagcagcacagaagaggcccccaccactgcagcacct
ggtgtagttaccacctcccagggcagggccatcactacggtcacccagtccacaccagcc
cccggaccctctgtaccttcgatctcatcaatcacagagggtgcgagcactgctgccagc
tccacagaggaacccatgcaaactgatgaagtagcatcagcagaagctgcacctgccgag
cagggagccaccgctatggagacacaagcagaggtaaattctgatgccacacaaagccag
tgttggcctgacattttaaaagtccattcaatcaaagatatgttacgtgtgtatatcacc
tctaatgtggtctttcagggagaagcagccacagcgactgccttgaatctgccctcagag
ctaatgtctgagggtcagggagccacactcatggtgacagggctgtcagacgaggagctg
gctgtgactgcagcagcagaggctgctgctcaggcagcagccactgaagaagcccaggcc
cttgctatccaggctgtcctccaggcagctcagcaagccgtaatgaatgagagcgattcc
actggagagagccagcaaaccaccaacatccccatcatgttgacccagcaagagcttgcg
gtgctggtccagcagcagcagcagctgcaagaggctcaggctgctgcacagcaggccacc
gtggacagcagcttgcccacagaaggcctcgcccctgctgacagcctcaacgacccctct
gtcgaaagcaacggacacaatgagatggcagccgcagtcaccagtgctgtggcgtcactg
ctgccacgtaccagtgctgagacacttgctccatcaagcacatttgcaccctctgtatca
gcggcaagtccagccaagctgcaagcagcagccgctctagcagaggtcgccaatggcata
gagggagagaagcaaggccctcagccaaccccagtgaagcctgttgtgaagaaggagaac
cagtggtttgatgttggaatcgttaaagtgacaaatatggttgtcacccacttctacgtg
ccagcagatgattctcatggagatgatgactctggcatcatgccagactacagccagatg
aagaaaatggagctgcagcctggaacagcttacaagttccgtgttgctggaatcaacgct
tgtggtcgtggagctttttcagagatatctgctttcaagacttgcctaccaggcttccca
ggggcaccttgcgccatcaaaatcagcaagagcccagatggtgcccacctgacctgggag
ccaccctcggtgacatcagggaagatcatcgagtactccgtgtacctggccatccagagc
aaccagacagctgaagccaaggcctccaccccggcgcagctagccttcatgcgcgtgtac
tgtggacccaacccctcttgcttagtgcaatcgtcgagcctctccaacgcccacattgac
tacaccaccaagccagccatcatcttccgcatcgcagcccgcaatgagaagggctacggt
cctgccacccaagttcgatggctgcaagaatctggcaaagatgctgcctctgctaaaccg
gcccccaaaagaccaggcacctcccctgatactaaggctactggtccaaagaaagcaagg
acggaccagtga
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integrated database retrieval system
