Micropterus salmoides (largemouth bass): 119885826
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Entry
119885826 CDS
T07309
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00260
Glycine, serine and threonine metabolism
msam00630
Glyoxylate and dicarboxylate metabolism
msam00670
One carbon pool by folate
msam01100
Metabolic pathways
msam01200
Carbon metabolism
msam01230
Biosynthesis of amino acids
msam01240
Biosynthesis of cofactors
msam04981
Folate transport and metabolism
Module
msam_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119885826 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119885826 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119885826 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119885826 (shmt2)
Enzymes [BR:
msam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
119885826 (shmt2)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
DUF5857
Motif
Other DBs
NCBI-GeneID:
119885826
NCBI-ProteinID:
XP_038552009
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All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MFFALRQLTRPLCQRAPVRVCVRGQQSHAATRTVDEDRPWTGQESLAQDDPEMWDLLRKE
KDRQSRGLELIASENFCSRAALEALGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCEKRA
LEAFDLDPALWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKRI
SATSIYFESMPYKLNTATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCTD
IKAYMLADMAHISGLVAGKAIPSPFEYADLVTTTTHKSLRGARAGLIFYRKGVRSMDKKG
KEIIYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAQSAMFKEYISQVLKNAKAMATA
LLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGL
RLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIAE
LRHRVEAFARPFPMPGFHDH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcgctctgagacaactcacacggccgctatgccagcgagccccagttcgtgtc
tgtgtacgcggccagcagtcccacgccgccactcgtactgtggatgaagatcgtccatgg
acgggccaagaaagcctggctcaggacgaccccgagatgtgggatctgctgcgaaaggaa
aaggacaggcagagccgcggcttggagctcattgcatctgagaatttctgcagtcgagca
gctttggaagctctgggctcctgtctgaacaacaaatactctgaaggctacccagggaga
agatactatggtggagcagaagtggttgaccaaattgagttgttgtgtgagaaacgagcc
ctggaggcctttgacctggacccagctctgtggggtgttaacgtccagccgtactctggc
tctcctgctaactttgccgtctacaccgccgtgctgaacccccatgaccgcatcatgggc
ctggacctgcccgacggaggacatctgactcatggctacatgtccgatgtgaagaggatc
tcagcaacctcaatctattttgagtccatgccctacaagctaaatactgcaacaggactc
atagactacgaccagatggagatgacggccaagctgttccggcccaagctcatcatcgct
ggcaccagcgcctatgcccgcctcattgactacgcccgcatcaagaagctgtgtactgac
attaaggcttacatgctagctgatatggcccacatcagtggcctggtggcaggcaaagcc
atcccctctccctttgaatatgctgacctggtcaccactaccacacacaaatccctcaga
ggagccagggctggcctcatcttctatcgtaagggtgtccgctcgatggataagaagggg
aaagagatcatttacgacctggaggacaaggtcaacttctcggtctttccctcactgcag
ggtggacctcataaccatgccatcgctggtgtggctgtggcgctcagacaggcacagtct
gccatgttcaaggagtatatcagccaggtactaaagaacgccaaggctatggctacagct
ctcctcagcaaaggctacaccctggtatcaggtgggaccgacaaccacctggtcctggtg
gacctgcggcctaagggcattgatggggctcgggctgagagggtgctggagctcgtgtca
atcactgccaataagaacacctgccccggggacaagagtgccctgactcctggtggcctc
aggcttggtgctccagccctgacctccagacagttcaaagaagctgactttgtgcaggtt
gtcgagttcatggacgagggcttcaagattgccttggacgtcaagaaaaagacaggaaag
ctccaagacttcaagaacttccttcttcaggacccagagacagtggctcgcatcgccgaa
ctgcgccaccgcgtagaagcttttgccaggcccttccccatgccaggtttccacgaccat
tag
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