Micropterus salmoides (largemouth bass): 119885862
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Entry
119885862 CDS
T07309
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119885862
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119885862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_4
SPRY
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-Nse
zf-rbx1
zf-RING_6
zf-ANAPC11
zf-RING_10
Perilipin
NAD_binding_5
Fib_alpha
PIN_8
Motif
Other DBs
NCBI-GeneID:
119885862
NCBI-ProteinID:
XP_038552099
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MASRSEEDLCCPVCQEVFRDPVVLSCSHSFCKVCLKSWWREKQAPECPVCKRRSSKDDPP
RNLVLKNLCEAFLQERDQRASEALCSLHSEKLKLFCLDHQQPVCLVCRDSEKHSNHRFRP
VDEAARQHKKELQETLEPLKEKLKVCEQVKVKFDQTAEHMKVQARHTERQIKEQFKKLQQ
FLEEEEVTRLVALWEEEEQKSQMMKEKMEALSREIAALSDTVRATEEELRAEDVSFLLNY
KAAVERVQQRPLLDDPQLPSGALIDQAKHLGNLTFNIWNKMKDMVSYTPLILDPNTAHPE
LILSEDLTSVRLGERQQLPDNPERFDYYYCAVLGSEGFNSGTHSWDVEVGDSTVWELGVL
AESVLRKEYIESGFLRIGFYEDKYSAWSPPAPPTDFRVQKKLQRIRVNLDWNRGKLSFSD
PDTNTHIHTFTHTFTERLFPLIDTGDEVKLSAVKVCVTVEQSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaggaggatctctgctgtccggtctgtcaggaggtcttcagagat
cctgttgttctgtcatgtagccacagcttctgtaaagtctgtctgaagagctggtggaga
gaaaaacaagcacctgagtgtccagtttgtaagagaagatcttcaaaggatgatccacct
cgtaacctggtgttaaagaacctgtgtgaggccttcttacaggagagagatcagagagct
tcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtgtgtctcgtctgcagagattcagaaaaacacagcaaccacagattcagaccc
gtcgatgaagctgcacgacaacacaagaaggaacttcaggaaactctggagcccttaaag
gagaagttaaaggtttgtgaacaagttaaagtgaagtttgatcaaacagcagaacacatg
aaggtccaggcccgacacacagagaggcagattaaggagcagtttaagaagcttcagcag
tttctagaggaggaagaggtgaccaggttggtggcactatgggaggaagaggagcagaag
agtcagatgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggaggagctgagagctgaagacgtctcattcctgctcaactac
aaggctgcagtggaaagagtccagcagcgccccctgctggatgatccacagctgccctca
ggagctctgatagaccaggccaaacacctgggcaacctgaccttcaacatctggaacaag
atgaaggacatggtctcctacactcctctcattctggacccaaacactgctcatccagaa
ctcatcctgtctgaagatctgaccagtgtgagactcggagagagacagcagcttcctgac
aatccagagaggtttgattattattactgcgctgtcctgggctctgagggctttaactca
ggaactcacagctgggatgtcgaggttggagacagtacagtctgggaactgggtgtgtta
gcagagtctgtcctgaggaaggaatacatagagtctggattcttgagaatagggttctat
gaagataaatactcagcatggtctccaccagctccacccactgatttcagagtgcagaag
aagctccagaggatcagagtgaatctggactggaacagaggaaagctgtcgttctctgat
cctgatactaacacacacatacacaccttcacacacactttcactgagaggctgtttcca
ttgattgacactggagatgaagtgaagctgtcagcagtgaaggtctgtgtgacagtggaa
cagagcagttag
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