KEGG   Micropterus salmoides (largemouth bass): 119885862
Entry
119885862         CDS       T07309                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
  KO
K12012  tripartite motif-containing protein 35
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119885862
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    119885862
SSDB
Motif
Pfam: PRY zf-RING_UBOX zf-C3HC4 zf-B_box zf-C3HC4_4 SPRY zf-C3HC4_2 U-box zf-C3HC4_3 zf-RING_2 zf-RING_5 Prok-RING_4 zf-Nse zf-rbx1 zf-RING_6 zf-ANAPC11 zf-RING_10 Perilipin NAD_binding_5 Fib_alpha PIN_8
Other DBs
NCBI-GeneID: 119885862
NCBI-ProteinID: XP_038552099
LinkDB
Position
Unknown
AA seq 463 aa
MASRSEEDLCCPVCQEVFRDPVVLSCSHSFCKVCLKSWWREKQAPECPVCKRRSSKDDPP
RNLVLKNLCEAFLQERDQRASEALCSLHSEKLKLFCLDHQQPVCLVCRDSEKHSNHRFRP
VDEAARQHKKELQETLEPLKEKLKVCEQVKVKFDQTAEHMKVQARHTERQIKEQFKKLQQ
FLEEEEVTRLVALWEEEEQKSQMMKEKMEALSREIAALSDTVRATEEELRAEDVSFLLNY
KAAVERVQQRPLLDDPQLPSGALIDQAKHLGNLTFNIWNKMKDMVSYTPLILDPNTAHPE
LILSEDLTSVRLGERQQLPDNPERFDYYYCAVLGSEGFNSGTHSWDVEVGDSTVWELGVL
AESVLRKEYIESGFLRIGFYEDKYSAWSPPAPPTDFRVQKKLQRIRVNLDWNRGKLSFSD
PDTNTHIHTFTHTFTERLFPLIDTGDEVKLSAVKVCVTVEQSS
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggcttccagatcagaggaggatctctgctgtccggtctgtcaggaggtcttcagagat
cctgttgttctgtcatgtagccacagcttctgtaaagtctgtctgaagagctggtggaga
gaaaaacaagcacctgagtgtccagtttgtaagagaagatcttcaaaggatgatccacct
cgtaacctggtgttaaagaacctgtgtgaggccttcttacaggagagagatcagagagct
tcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtgtgtctcgtctgcagagattcagaaaaacacagcaaccacagattcagaccc
gtcgatgaagctgcacgacaacacaagaaggaacttcaggaaactctggagcccttaaag
gagaagttaaaggtttgtgaacaagttaaagtgaagtttgatcaaacagcagaacacatg
aaggtccaggcccgacacacagagaggcagattaaggagcagtttaagaagcttcagcag
tttctagaggaggaagaggtgaccaggttggtggcactatgggaggaagaggagcagaag
agtcagatgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggaggagctgagagctgaagacgtctcattcctgctcaactac
aaggctgcagtggaaagagtccagcagcgccccctgctggatgatccacagctgccctca
ggagctctgatagaccaggccaaacacctgggcaacctgaccttcaacatctggaacaag
atgaaggacatggtctcctacactcctctcattctggacccaaacactgctcatccagaa
ctcatcctgtctgaagatctgaccagtgtgagactcggagagagacagcagcttcctgac
aatccagagaggtttgattattattactgcgctgtcctgggctctgagggctttaactca
ggaactcacagctgggatgtcgaggttggagacagtacagtctgggaactgggtgtgtta
gcagagtctgtcctgaggaaggaatacatagagtctggattcttgagaatagggttctat
gaagataaatactcagcatggtctccaccagctccacccactgatttcagagtgcagaag
aagctccagaggatcagagtgaatctggactggaacagaggaaagctgtcgttctctgat
cctgatactaacacacacatacacaccttcacacacactttcactgagaggctgtttcca
ttgattgacactggagatgaagtgaagctgtcagcagtgaaggtctgtgtgacagtggaa
cagagcagttag

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