Micropterus salmoides (largemouth bass): 119885874
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Entry
119885874 CDS
T07309
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00310
Lysine degradation
msam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119885874 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119885874 (prdm2b)
03036 Chromosome and associated proteins [BR:
msam03036
]
119885874 (prdm2b)
Enzymes [BR:
msam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
119885874 (prdm2b)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119885874 (prdm2b)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119885874 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2HC_2
zf-C2HE
zf-C2H2_jaz
Zn_ribbon_PaaD
TPR_Trm732
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
119885874
NCBI-ProteinID:
XP_038552114
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MAIREGTVETLDEIPAHMWRGLPDCLSLRPSVINQSRVGVWATRVIPKGKRFGPFVGEKK
KRSQVTSNVYMWEVYFPARGWMCVDATDPMKGNWLRYVNWARSSEEQNLFPLEINRAIYY
KVLRPIGPGEELLVWYTVEDNPEITAALEEERASSLSRKNSPRAKRARRKLLERARQSGL
GGFKKTSLTKPTLKEMWDGKDGLKEEDERPSIVGPSQELQETHPRASHDLRHVEDMSAGM
TDRGNVEEEEEEEEDEEEDADDLDEPAQIRMQAALHSPAVESMQNKQNAPLLNCGEGNHK
DSQAKLESSSHAGQEPEGDPDLDLDPDGDLEGDPHGDSYPCQYCERHFSTRQGLERHNHI
HAISNQQTQLFKCRYCSKSFGSQVGRRRHERRHESGPKKRPGSLAGTASLLSPVVQTDGS
SPDYTSPTSHYIAIGSQFTGGLHNSDLQRKELGPHGDRPFILDENGESKELHPCKYCNKA
FGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQEASAQQQPNESPSTSPPPVYVPSADTED
EADRDDYAVDISKNISENLSFYIDGKIVSTSSVSTCEVIEVDSRSAALFGLDTVIISPNQ
ISQALKAEGRASTAKQVSNIGQPAAKRRTSTPPLVPGLKVETETSSFTASSSSSSSSTSS
SSNLLLGGLLQQAADSSAFQREKTVYLSPKLKQLLQTQDIQKSTIALITESHRLASPLSV
TPLPGASGRFKRRTASPPSSPQLSPACKTESCKAEVVSSYTLKVPKLESRSVSPPGSLLD
KEDGDGLPGNVHGQTSSSSGGNSCNQQPLDLSNSLCRSNDSVSKVLGDSALDLSLHRKSN
VDPESKGSPAPQPLIKKRKPNTSMLEKVLMNEYVAPTLSGEEGPSALATLNCFQSRSPNV
ASESAHPSPPPLTPVTMNPSSPSSSSVTSPTPPPPVLPTIPSPPTMPSSPISQPSDCSAL
RPLPVLSPKMSPRSVEPKPLSDSEEVLSAEQNKEEEENHIPEPLDSPKTPHKDPLNFSAT
SGPPEPTSLDLPTTDDVSQTTTCSSLLNSKINQNLNPVTEKSLAALSSQPETSSPPPSSH
DPSPSLVSQSLPLIKIKEEPQYCVDELSVMNHAPQDADDSSPQPATPVKLSNKTSEGEEV
DSTYCKTFVCNVCEEPFNSIKELSGHIAEHAVDWPFKCEFCVQLFGDAPALLAHRTALHG
VGRIFVCSVCSKEFAFLCNLQQHQKDLHPNETCSHTAVESGKLRPQNYTDPSRAKEESSP
LTPAPETTDEASLQNDSDLAKEDPDINGNHAEDCAEDPNEELYTTIKIMASEGGKAKGPD
VRLGINQHYPSFKPPPFPYHSRSHAGSVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMP
ELHKHILVCANASDKKRYTPKKNPIPLKQIVKSPNGVVSPSAAIAGQSAFRRMGQPKRLN
FNQDTGKMKMSALSKKKNQLVQKAISQKNKAATIAKKATVKVEEEQASNVCPHCSREFTY
PASLSKHMAVSCPMKPIVKKGKKGQAEVKKEAVSVVDKNMNLRKKASDYEIQQTEPEPKP
LGKTRTRSSGVADLEPSHASKGKTAAVVGRLKRPASFPAQVPASKKTKKGQFQSLPPTPS
ASDTTSDSAIQRPAMRMQRVGKEAAPKRLAEAKSPPLPQQLKKEERFSLRTRDRVGGPVT
RSLQMANTAPSAEVKTEEPLIQEPKETQEEVLMK
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggctattcgtgaggggacagtagaaactctggatgaaattccagctcatatgtggagg
ggtttgcctgactgtttgagtcttagaccttctgttataaatcaaagccgggtcggtgtc
tgggccacccgggtcattccaaaaggcaagaggttcggcccatttgttggagagaagaaa
aaaaggtcccaggtgacgagtaatgtttacatgtgggaggtttatttcccagcgcggggc
tggatgtgtgttgatgccacagaccccatgaaggggaactggctgcgatatgtgaactgg
gcacgctccagtgaagagcagaatcttttccccctggagatcaacagggccatttactac
aaagttttacggcctatcgggccgggagaggagctgctggtgtggtacactgtggaagac
aaccctgagataacagctgcactggaggaagaaagagccagcagtctgagcaggaaaaat
tcacccagggcgaagcgagccagaagaaagctactggagagagccagacagtctggtttg
ggtggattcaagaaaacgagtttaaccaaacctactctcaaggagatgtgggatgggaaa
gacggcctgaaggaggaggatgagaggccatcaatcgtagggccctcgcaggaactccag
gaaacccatcccagggcaagccatgaccttagacatgtggaggacatgtcagcagggatg
acggacaggggaaatgtggaggaggaggaagaagaagaagaagacgaggaggaggatgct
gatgatttggatgaaccagctcaaattaggatgcaagctgctctgcattcacctgcggtt
gagtctatgcaaaacaagcagaatgccccattgctgaactgtggtgaaggaaaccataag
gattcgcaggcaaagttggagtcttcctcgcatgcagggcaagaaccagagggggatcct
gatcttgaccttgacccagatggtgaccttgagggcgatccccatggagattcctatccc
tgtcagtactgtgagcgccacttctccaccaggcagggtctggaacgccacaatcacatt
catgccatctctaaccagcagacacaactgttcaagtgccggtactgcagtaaatccttc
ggttcacaggtggggcggcggcggcatgagagaaggcatgagagtgggccaaagaaaagg
cctggctctctggctgggactgccagtctactcagtcctgtggtccagaccgacggttca
agtcctgactacaccagcccaactagtcactatatagccatagggtcccagtttactgga
ggactgcacaactctgacctgcagagaaaggagttgggacctcatggtgaccgtccattt
atattggatgaaaatggggagtctaaagaactccatccctgcaagtactgtaataaagca
tttggcacacacaccaacatgcgccgacaccaacgcagaatacacgaacggcacttgtta
ccaaagggagttcgcaggaaaggcatgctgctgcaagaggcgtcagcgcagcaacagccc
aatgaatcccccagcaccagccctccgcccgtttacgtgcccagtgcggacacagaagat
gaggcagacagggacgattacgcagttgacatatcaaaaaacatctctgagaatttgagc
ttctacattgacggcaagattgtgtccaccagttcggtgagcacttgtgaggtgatagag
gtggactccagatctgcagctctgtttggtctggacactgtaatcatcagcccaaatcag
atcagtcaggcgctgaaggcagagggtagggcaagtaccgcaaagcaagtctccaacatc
ggtcagccagccgcaaaaagaagaacatctacacccccacttgttcccggccttaaagtg
gagacagaaacctcatctttcacagcctcttcatcgtcttcatcatcctctacatcttcc
tcctctaacttgttattaggaggactgttgcaacaagctgcagattcatcagcgtttcaa
agagagaaaaccgtttacctctcacctaagctcaaacagctccttcagactcaagacatt
cagaaatcaaccatcgccctgatcacagagagccacaggctggcctccccgctgtctgtc
acgccgctgccgggggcttcaggcaggtttaaacgaagaacagcctctccgccgtcatca
ccacagctcagccctgcatgtaaaacggagagctgtaaagctgaggtggtgagctcatac
acccttaaagtgccaaagctggaaagccgcagcgtgtcacctcctgggagcctactggac
aaggaagatggagacggccttcctggaaatgtgcatggccagacttcttctagtagtggt
ggaaattcctgtaatcagcagcccttggatctgtcaaactccctctgtaggagcaatgac
agcgtgagcaaggtgcttggggattcagcactggatttaagcctccatcggaagagcaat
gttgatcctgagtcaaagggaagtccagcaccacagccactgataaaaaagagaaagcct
aacactagcatgcttgaaaaggtgctgatgaatgagtacgtagctccaactttgtcaggt
gaggaaggcccctcggccttagcgaccctaaattgttttcaatctcgctctccaaacgtt
gcgtcagagtctgctcacccctctccaccccctttgactcctgtcaccatgaacccatct
tcgcccagttcctcaagcgtgacatccccaacaccgcctccccctgtactacctaccata
ccctctccgccgacaatgcctagctctcctatttctcagccttcagactgctctgcactg
agacctcttcctgtcctctcgccaaaaatgtctccaaggtcagttgaacccaagcccctg
tcggactcggaggaggttttgtcagcagaacaaaacaaagaagaggaagagaaccacatc
cctgagccactggactccccgaagactccacataaagatccccttaatttttcagcaaca
tcaggccctccggagccgacatcactagatctgcccactacagacgatgtttctcagact
acaacttgcagcagtctgctaaacagcaaaattaaccaaaatctcaacccagtaacagag
aaatctcttgctgctctctcatcccagccagaaacgtcgtctcctcctccttcatcacat
gatccatccccatcactagtttcacaatccctccctctgattaagataaaagaagagcct
cagtactgcgtagatgaactatcagttatgaatcatgcacctcaggatgctgatgactct
tcacctcaacctgctactcctgttaagctgtctaataaaacctctgagggggaggaagtc
gactcgacatactgcaagacgtttgtgtgtaatgtctgtgaggagccgttcaactcaatc
aaagagctcagtggacacatcgcagagcatgctgtggattggcccttcaagtgtgaattc
tgtgtgcagctgttcggtgacgctccggccctgctggctcaccggacagcgctacatgga
gtgggcaggatctttgtgtgctcggtttgttccaaggagtttgcatttctctgtaacctc
cagcagcaccaaaaagacctgcatccaaacgagacatgttcacataccgccgtagagagt
ggcaaacttaggccacaaaactacactgatccgtctagagccaaagaggaaagcagtccc
ttaacaccagcaccagagactactgatgaagcatctctacaaaatgactctgatttagca
aaagaagatcctgacattaatggtaatcatgcagaggactgcgccgaggaccctaatgag
gagctgtacactacaataaagatcatggcctcggaaggagggaaggctaaaggcccagat
gtccgtcttggcattaatcaacactaccccagttttaaaccacccccttttccttatcat
agccgttcccatgccggctctgtggcttcagctactaactttaccacccacaacataccg
caaacgttcagcactgccattcgctgcaccaagtgtggcaacagctttgacaacatgccc
gaactgcacaagcacattttggtgtgtgccaatgctagtgataagaagcgttacactccc
aagaaaaaccccatccccctcaagcaaatagtgaagagtccgaatggagtcgtgtcgccc
tcagctgccatcgcaggccagagtgctttccgtagaatgggtcagccaaagagacttaac
tttaatcaagatactggtaaaatgaaaatgagtgccctcagtaagaagaaaaaccagctt
gtccagaaggcaatttcacagaaaaataaagctgccactattgcgaagaaggctaccgtt
aaagttgaagaagagcaggcctctaacgtctgcccccactgcagtcgggagtttacttat
cctgcaagtctcagtaaacatatggcagtcagctgtcccatgaagcctattgttaaaaag
ggcaaaaaaggtcaggctgaggtgaaaaaagaggcggtgtcagtggtagataaaaacatg
aatcttaggaagaaagcttcagactacgaaatacagcagacggagccagagcctaaaccc
ctgggaaagactaggactcgtagctctggcgtagcagaccttgaaccctcccatgcaagc
aaaggaaaaactgctgctgtggtgggccggctaaagaggcctgcctcattcccagcacaa
gtccctgctagcaaaaaaactaagaagggccaatttcagtctctacctccgaccccatca
gcctcggacacaaccagtgactctgcaatacaacggccagccatgagaatgcagcgtgtg
ggcaaagaggcagcacccaagagattagcagaggccaaatcaccaccactaccacaacag
ctgaagaaggaggagcggttctcccttcgaacaagggacagagtaggtggtccagtcacc
aggagcttacaaatggccaacacagctccttctgctgaggtgaaaactgaggaaccacta
attcaagagccaaaagagactcaggaggaggtgctgatgaagtga
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integrated database retrieval system
