Micropterus salmoides (largemouth bass): 119885882
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Entry
119885882 CDS
T07309
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119885882
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119885882
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
U-box type E3
119885882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-CCHC
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
119885882
NCBI-ProteinID:
XP_038552124
LinkDB
All DBs
Position
Unknown
AA seq
1852 aa
AA seq
DB search
MTHVHYKFSSKLSYDTVVFDGPHITLRDLKRQIMGREKLRAGDCDLQITNAQTKEEYTDD
EGLIPKGSSVIVRRIPIIGGKSGSSSKIRNIERSDVHLHHALGAVKAMDDQRSSRVMPFF
SKMANLADADVSEEDKIRVMINQSTYDSMNYNKKFGTVLPANYTCYRCGNTGHHIRNCPT
SGQDKNFEAPLRIKKSTGIPRSFMVEVDDPSIKGAMLTNCGRYAIPAIDAQAYAIGKKEK
PPFIPQDQPKSEGEEDPVPEELLCVICHDLLSDAVVIPCCGNSYCDDCIRTALLDSEEHI
CPTCSQSDVSPDTLSANKFLRQAVNTFKKERGFTKSLVKGCGISQSQNPAPTPSPVPTPP
PLTMQSQPQKPYQSTHSQQDPLLPFSQAADTPTSSQVFGAPPTATGPPSASSTPSPSLEP
VQSHLEISDKEAAEETHDDSAAAAPSVLVLHKDPAAAPSQQIPLVNLTPVVEQPQTVSVN
LQQSSSASAPRHCGPSPCWESSSSSSSCPTGGWNESNTQQRPPSSSSSSSYPATPPPLFP
SPHFHTFLAAQQPLNSYPPGYPPTTPVWTLPTPQGAPIPSLCSSTSIAPIPALIPKEWYS
HQRKKKERSPHGGSTYRRFSSRSHSKSSKSKSSSSRSRSRSRSRSQGRSRPQSPYSRHRD
LHTRSLSSRSYSYGYKRSRSPTPSSSSSPRVGYSRSKSASGHRKNSQHSRHSNKKPASSS
YSSRRRGERSQREAGGSGGGLASCLNAQHANQTSSLELDRERYLQWKREYKEWCEKYFSS
YVGLFHQLPPPLLNLHPSPHPQWGCREGSINHSHTNSESLSRQVRRTARMGVPSPPSQSS
SDSRSPPSHSSSDSHSTPSQSSSDSRSSPPHSSNDSRSPPSQSSSDGRSTSFEDRAQLMA
HQQRCAEKYSRLPITLTKDSKEVELQERSKDNKQLITRNLEKLSTLKHEQKSIKKHEEEG
GKNSSSPDAADSIDDTGPNACKDGTLEQDKANASLALESIQPLVKPDKRFDQVYERKSRE
QRNLGIEKGWRRGQHSESRQDEQRPHKEKHSKGGDRVDSDRYRNPGGSKASDSRSEKNRK
RKGEDMQRSPVKAQSSKCLKSKIAEHTETHKSEPPNPFDRKKPKTEKRERKTWPLTDRDI
WEGEIKVKPQKKISININLDGKRQEEKTEKQDLSNLESITVKTTGEIEKTCYRQEEKSNG
GETKIEVNEKNESRRDQEGVTEDNIKPDVGKIRQKWEKATFRDGKGEAWGKIPEEKKDVR
EKKEDIKEEDFDLRHCAFRGVEEEKVSKKQWKEGVRMEGSKGEEVTNEEGEMGELVTGTQ
KKRAERESTCTENRGNPPGESKPKEELMDGVKWRMKKEENTVKSKSQRSRNDSYHVRPNP
TVDDGSSYESHQEWKTVVALEEYNQDRAVEKEDQHLLIEVPRSKWENEESEGEEQDESKI
QVQADALAVFMPSPSVSVTAETPTDRETEEENEQKRQRSVEIEGERARAMENARDSEGEK
NNILSSSHRSEAPSSGKDRTDRGREKVVEMERPRHRDRGRESERPRDRQKKSKRSKGRTR
EEEKGRERERDGQHGNIASIQNRNPSSSVQSCASSVSHDTDRRDRGREGDHNSIMTSSSP
GGKFSSGRSWESSTISRAIELPDKNAHKTYKDHPHFYHNQQDPSGSFRHKDRPVGTDHSP
PSLPHSRGKERIPLPCKPSGGSELGKRSKVDKVYKGGKGARENQEMVAQREGGGPCEGKA
DQLDGQTKWEGARELEEGERPSSRSNSASSSKSQESGRDDRRKETKKRHKKHKKETRQPS
LELLEEGELKKHKHKKKSKKSRDGGEEESSGEVDGAGKKDEDHAKLCSLMLY
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgttcattataaattctcctccaaactcagctacgacacggtggtttttgac
ggcccgcacatcacgctgagggatctgaagaggcagatcatgggcagagagaagctccga
gccggggactgcgacctgcagatcacaaacgcacagaccaaagaagagtacacagatgat
gaaggcctgatccccaaaggctcctctgtcatcgtcaggagaattcccatcatcggagga
aagtctggctcgagcagcaagatccgcaacattgagcgatcagatgtccaccttcaccac
gcccttggagccgtcaaagcaatggatgaccagcgttcttccagagtcatgccctttttc
tccaagatggctaacctggctgatgcggatgtgtcagaggaggataaaatcagagttatg
ataaatcagtccacatatgactccatgaattataacaagaagtttggtactgttcttcct
gccaactacacctgttatcgctgtggaaatactggacaccacatcaggaactgtcccacg
agcgggcaggataaaaatttcgaggcccctctgagaataaagaagagtacgggcatccca
cgttccttcatggtagaggtagatgatcccagcataaagggagccatgctgaccaactgc
ggacgttacgcgattcctgccatagatgctcaggcgtatgccataggcaagaaggagaag
cctccgttcattccacaggaccagcccaagtcagaaggcgaggaggatcctgtacctgaa
gaactcctctgtgtgatctgtcacgacctgctgagtgacgctgtggttataccctgctgt
ggaaacagctactgtgacgactgtattcgcaccgccttactggactcagaggaacacatc
tgccccacttgtagccaatcagatgtctcccctgataccctgtcagccaataaatttctc
agacaggctgtgaacacctttaagaaagagcgaggtttcactaaaagtctggtaaaaggg
tgcggtatctcccaatcccaaaatccagccccgacgccaagccctgtccccaccccgccc
cctctcaccatgcagagccagcctcagaagccttaccagtcaacccacagccagcaggac
cctctcctgcccttctcacaggctgcagacacaccaacatcgtctcaggtgttcggggct
cctcccacagcaacaggccccccctctgcttccagcacaccaagcccgtccctcgagcct
gtgcaaagccacctggagatatctgacaaagaagctgcagaagagacacatgatgactca
gcggctgctgccccttctgtgcttgttctacacaaagaccccgctgctgctccatcacag
cagataccactggttaacctcactccagtggtagagcagccccagacagtgagtgtgaac
ctacagcagtcctcctcagcttcagccccaagacactgtgggccttcaccatgctgggag
agctcctcttcctcctccagttgtcccactggaggctggaatgaatcgaacactcagcag
cgtcctccctcctcctcttcttcctcttcataccctgcaactcctccgcctctctttccc
tccccccattttcacacattcctcgccgctcagcagcctctcaacagttacccccctgga
tacccacctaccacgcccgtctggacactcccaaccccccagggtgcccccatcccttcc
ctctgctcctctacctccatcgcccccatccctgccctcatacccaaggagtggtacagt
catcagaggaagaaaaaggaaaggtcacctcacggaggatctacctacagacgcttctcc
tctcgttctcattcaaagtcatctaagtccaagtcctcttcaagcaggtccagatcccgt
tcccggtccaggtcccaaggaagatcaaggccacagtcaccttactcccgccacagagac
cttcacacccgctctctttcctcccggtcctatagctatggatacaaacgttcacgctcc
cctacaccgtcctcatcatcttcacctcgagtgggttactcgaggtccaagtcggcgtca
ggtcaccgcaaaaacagccagcacagtcggcatagcaataagaaaccagcttcgagcagc
tacagctccaggagacgaggagagcgctcccagagggaggcgggaggctcagggggcggt
ttagctagttgcctgaatgctcaacatgcaaatcaaactagcagcctggagctggacaga
gagcgctacctgcagtggaaaagggagtacaaagagtggtgtgagaaatatttcagcagc
tatgttggcctcttccaccagctgcctcctcccctcctcaacctccatccctctcctcat
cctcagtgggggtgcagagaagggagcataaatcactcacacaccaactctgaatctcta
agtcgacaagttagacgcactgcccgcatgggcgtcccatcacctccatcgcagtcatcc
agcgacagccgctcccctccatctcactcttcaagtgacagccactccacgccatctcag
tcatctagtgacagtcgctcctctccacctcattcgtccaatgacagccgatcccctccc
tctcagtcgtctagtgatggtcgctccacttcatttgaagacagagctcagctgatggca
catcagcagaggtgtgctgagaagtacagccgcctgccaatcacacttacaaaggacagt
aaggaggtggaacttcaagaaagaagtaaagacaacaagcagctgatcacaaggaatctg
gagaaactcagcaccttaaaacatgagcaaaagagcattaaaaaacatgaggaagaagga
ggaaagaattcttcatcccctgatgctgcagactcaattgatgacactggaccaaatgcc
tgcaaggatggcacactggaacaggacaaagcaaatgccagtcttgccttagaatcaatt
caaccactcgtgaaaccagataaacgttttgatcaagtctatgaaagaaaaagcagagaa
caaaggaatttgggaatagagaaaggatggagaagaggccaacattcagagtccaggcag
gatgagcagagaccgcacaaagaaaagcacagcaaaggtggagacagggtggattcagac
agatacagaaaccctggaggcagcaaagcttctgactccagatcagagaagaatagaaaa
agaaaaggggaggacatgcagagaagtcctgttaaggctcaaagcagcaagtgcctgaaa
agtaaaattgcagagcacactgaaacccacaagagtgaacccccgaatccatttgacagg
aagaagcccaagacggagaaaagggagaggaagacatggcctctgacagacagagacatt
tgggagggagagataaaggtgaaaccacagaagaagataagcatcaacatcaacctggat
gggaaaagacaggaagagaaaacagaaaaacaggacttgtctaatttagagagcatcaca
gtaaaaacaacgggagaaattgagaagacttgttatagacaggaggagaagtcaaatgga
ggagagacaaaaattgaagtaaatgaaaagaatgaatcccgcagagaccaggaaggtgtg
actgaagataacataaaaccagatgtaggaaagataagacagaaatgggagaaagctacc
ttcagagatggtaagggagaggcgtggggaaaaattccagaagagaaaaaagatgttaga
gaaaagaaagaggacataaaagaagaggactttgacttaaggcattgtgccttcagagga
gtggaggaggagaaggtgagtaaaaaacagtggaaggaaggagttagaatggagggcagc
aaaggagaagaggtgacaaatgaggagggagagatgggagagttagtcacaggtacccag
aagaagagggcagagagagagagcacatgcacggaaaacagaggaaacccaccgggggag
tcaaagccaaaggaggagctgatggatggagtgaagtggaggatgaagaaagaagaaaac
acggtgaagtccaagtcacagaggagcagaaacgacagctaccatgtcagaccaaaccct
acggtggacgatggcagcagctacgagtctcatcaggagtggaagacggtggtagctcta
gaggaatacaaccaggacagagctgtggagaaagaggaccagcacctactcatagaggtc
cctcgctccaaatgggagaatgaagagtctgagggagaagagcaggatgaaagcaagatc
caagttcaagcggatgctcttgcggtttttatgccttcaccatccgtgtctgtgacagca
gagacaccaactgacagggaaacagaggaagagaatgaacaaaagagacagaggtcagtg
gaaatagagggagaaagggccagagcaatggagaacgcaagggacagtgagggagaaaaa
aataacattttgtcctcttcacacagaagtgaggctccctctagtggcaaagacagaact
gacaggggtagggagaaagtggtggagatggagagaccaaggcacagagatagagggagg
gagagtgagagacctagggataggcagaaaaagagcaaaaggtcaaaagggagaacaagg
gaggaagaaaaaggtagagaaagggagagagatggccagcacggcaacattgcctcaatc
caaaataggaatccctcttcctccgttcaatcttgcgcttcttctgtgtcacatgacaca
gataggagagacagggggcgagaaggcgaccacaacagcatcatgacttcctccagtcct
ggggggaaattttccagtggcagaagctgggaaagcagcacaataagcagagctattgaa
ctgcctgataaaaatgcacacaagacatataaagaccatccccacttctatcataatcag
caagatccatcagggagcttcagacacaaggacagacctgtagggaccgaccactcccca
ccttccctcccccacagccggggtaaggagagaatcccactcccctgcaaaccctctggt
gggtcagagcttggtaagcgaagcaaagtggataaagtatataaaggaggcaaaggggcg
agagaaaatcaagagatggtggctcagagagaaggaggtggtccatgcgagggtaaggct
gatcaacttgacggacagaccaagtgggagggagcgagagagctggaggaaggggagagg
cccagcagccgcagcaacagcgccagttcatcgaaaagccaggagagcggcagggacgac
aggagaaaagagacgaaaaagagacacaagaagcacaaaaaggagacaagacaaccttcc
ctggagctgctggaggaaggtgagctgaagaaacacaaacacaagaagaagtcaaagaaa
agcagggatggaggagaagaggagagtagcggggaggtggacggcgcggggaaaaaggat
gaagaccacgctaagctctgctcacttatgttatactga
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integrated database retrieval system
