Micropterus salmoides (largemouth bass): 119885936
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Entry
119885936 CDS
T07309
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119885936 (ddx27)
03009 Ribosome biogenesis [BR:
msam03009
]
119885936 (ddx27)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119885936 (ddx27)
Spliceosome [BR:
msam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119885936 (ddx27)
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
Pre-60S particles
Helicases
119885936 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
SNF2-rel_dom
FerA
PRK
Astro_capsid_p
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
119885936
NCBI-ProteinID:
XP_038552227
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MLEQLGLIGTIRDEEESPEEPDTESDQEDTPIVLNRKKKFGSRGAADFNADFEFGERDVL
DQDEDWVMADVMKQLKNKRTATTLDQKIEKIRKKRKAEEKSAQSDAAEGSAGKNQEEEDE
EDVKPPAGEADGGDEEDEEDEDEFDSADEEILTKSDTLRDKERRRRKRKGEEEAPETFYE
DASQYNDQLTFDDMNLSRPILKAVTALGFKLPTPIQKACVPVGLLGRDLCACAATGTGKT
AAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDL
KSQEVALRAGPDILIATPGRLIDHLHNTPSFELTHIEILILDEADRMLDEYFEEQMKEII
RLCSYNRQTMLFSATMTEEVKDLAAVSLKQPIRIFVNSNTDVAPFLRQEFVRIRPNREGD
REAVVAALLTRTFQDHVMCFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRF
KDEQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGE
SERKMLKEVVKSAKSSVKARVLPPDVILKFRDLISKLEKDVEAVMRLEREERELAASEAK
LSVAQKRLDSSASSCQSQRVWFQTQQERKQSRASKALQEFDLALRGKKRREKFLKDGGKK
ELTPEERAQFEILKAQMFAERAAKRERRPKRARAMVEDETPSTAANQKRAKGGKKSVFDK
ELTNTSSKALKHYRAGPSFTDRKRLGLDRKRPGSSRFKKK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgttagagcagctgggtctgatcgggacgatccgggacgaggaggagagtccggaggaa
cccgacaccgagtccgaccaggaggacacgccgatcgtcctgaacaggaagaagaagttt
gggagtcgcggggcggcagatttcaacgctgactttgagtttggagagagagacgtgctg
gaccaggacgaggactgggtgatggctgacgtcatgaaacagctcaagaacaagagaact
gcaactactctggatcagaaaatagagaaaatccggaagaagaggaaagctgaggagaaa
tccgctcagagtgatgctgctgaaggttctgcagggaagaaccaggaggaggaagacgag
gaagatgtgaagcctcctgcaggagaggctgatggaggtgatgaggaggatgaagaagat
gaagatgagtttgactcggctgatgaggagattctgaccaaatcagacaccctgagagac
aaagagcgacgccggaggaagaggaagggcgaagaggaggctccggagacattctacgaa
gacgcgtctcaatacaacgatcagctgacctttgatgacatgaacctgtcccgacccatc
ctgaaggccgtcacagctctgggcttcaagctgccgactcccatccagaaggcctgtgtt
cctgtgggcctgctggggagagacctgtgtgcctgcgctgctactgggacaggaaagact
gcagccttcatgttgcctgtgttggagcgtttggtttataagcccaggacgtcccaggtg
acccgggtcttggttctggttcctaccagggagttggggatccaggttcactctgtggcc
cgtcagctcgcccagttcacctccatcaccacctgcctggctgttggtgggttggacctg
aagtctcaggaggtggcactgagggcggggccagacattctgatagctacacctggtcga
ctcatcgatcaccttcacaacacgccgagctttgagctgactcacatcgagatcctgatc
ctggacgaggctgacaggatgttggacgagtactttgaggagcagatgaaagagatcatc
cggctgtgttcctacaacagacagaccatgttgttctccgccaccatgacggaggaggta
aaggacctggccgcagtctcgttgaagcagccaatcagaatctttgttaacagcaacact
gatgtggctccgtttctccgacaagagtttgttcgaatccgaccaaacagagagggagac
agagaggctgtggtggccgctctgcttactcggacgttccaggatcacgtaatgtgtttc
actcagaccaggaagcaggctcacagactgcacatcttactgggactgatgggactgaag
gttggagaactgcacggagaactgagccagaaccagaggctggagaacctcaggcgtttt
aaagatgaacagattgatatcttggtggcgacagatgtagcagccagagggttggacatt
gacggagtcaaaacggtgataaacttcaccatgccgtccacagtgaagcactatgttcat
cgtgtcggccggacggcgagagccgggcgctcaggacgttcggtgtctctggtcggagag
tctgagaggaagatgctgaaagaggtggtgaagtctgccaagagcagcgtgaaggctcga
gttctgcccccagatgtcatcctgaagttcagagatctgatctctaaactggagaaagac
gttgaagctgtgatgaggctggagagagaggagagagagctggctgcgtctgaggctaag
ttgagtgtggctcagaagcgtctcgatagctccgcctcctcctgtcaatcacagagagtc
tggtttcagactcaacaagagcggaaacagagccgtgcgtcgaaggctctgcaggagttc
gatctcgctctgagaggaaagaagaggagagagaagttcctgaaggacggcgggaagaag
gagctgacgcccgaggagcgcgctcagttcgagatcctcaaggctcagatgttcgccgag
cgggcggccaagagagagagacgaccgaagagagcgagagctatggtggaggacgagacg
ccgagcacagcagccaatcagaaacgagcgaaaggaggcaagaagtctgtgtttgacaaa
gagctgaccaacacgagcagcaaggctctgaagcactacagagctggaccgtccttcaca
gacaggaagcgtcttggtttggacaggaagcgtcccggcagctccaggttcaagaagaag
tga
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integrated database retrieval system
