Micropterus salmoides (largemouth bass): 119885974
Help
Entry
119885974 CDS
T07309
Symbol
tmf1
Name
(RefSeq) LOW QUALITY PROTEIN: TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119885974 (tmf1)
Membrane trafficking [BR:
msam04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119885974 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
119885974
NCBI-ProteinID:
XP_038552293
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MSWFNASHLSTFAKQALTTAQKSIDRVLDIKEEDQWGDTVVMPYNDVTLPGKLSLSGGWG
MSQWEAPPEEKTTTPPPSSEAITTPVTRTVVDESENFFSAFLPPGDAQAVTKTKVVSVPP
TMSQRRPQEKEKQNKEAVVQKEVETQKSAPADKSLEIQTVAENQPLEPESSPSAPHADTI
LLEPVSPTSSSDLPCSPDDSVKTDAGSVVSADSKTEESQPPSDQVDQGTADPSEPSAVSS
EPKSSTPSDSSPSPSSKEVLIEHKDTKVEDRQSDTPSPPVSAFSSGTSTTSDIEVLDHES
VLSESSASSRQETGEGKAGLHLMQGSFQLLSASTCGDFPRLEDYSKLTESCGSSSDAFER
IDSFSVQSLDSRSVSEVNSDDEIPGSRTLASVTAGPAPLTVSSAVCQQKEDGVGEKVGEG
KEEEEEEEGFTETVREQSLDEMEESGRSATPVNSEQPEELTEQEQGSEANATVFEPTSKA
EEQITQPITEEMKSFSTVQILELQKVIDELSGRLEKRESQLLAVSKDKARLEEECDNLRD
EVVSLKEESSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREELSTRLNASDT
MEIIKEKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKTIKQQKKIKEQEDEL
RQLQQVLDGKEEVEKQHRENIKKLNGVVERQEKELSRLQTDAEELQEQNRSVQAALDNSY
KELAELHRANASRVSDAEEAALSRETQAKEQLSLALEKAKEEARMQQEALANQVADLRLA
LQRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLGG
QTASWEKLEKNISDRLAEAQAQLAVAVEKERSAAEELLSIKSQLASXDSQNSLLRQEKAR
LLAQLEAEKNKREKLEDETSREHVELENLRGEHIRMQEDAKKEKLLLTNQLEMEKMKVEQ
EKKKCYLAQEALKEKERKAMSHSVGEPPASSTPSLSRSSSISGADNAGLHTSILSQDDSL
DHSLATMTMSVSMSGTNLYEAARLSGGSSIVENLQSQLKLREGEIAQLQLEISSLERSRS
VMSEELVRLTNQNDEMEEKVKEIPKLKVNLKELEQRHNTILQMYGEKAEEAEELRLDLED
VKNMYKTQIDELLKNQK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaatgcatctcatctgtccaccttcgctaaacaagctttaacaacagct
cagaagtcaatcgaccgagttctggacatcaaagaagaggaccaatggggtgacacagtt
gtaatgccctataatgatgttacattacctggaaagctgtcattgagtggaggatgggga
atgtcgcagtgggaagcaccccctgaagaaaagaccactactcctcctccttcctctgag
gccattactactcctgtgacccgtacagttgtagatgaatccgaaaactttttcagtgcc
tttctgccacccggagacgcacaagctgtcaccaaaaccaaggtagtgtctgtaccccct
actatgtctcagaggcgacctcaggagaaggaaaagcaaaataaagaggctgtggtccaa
aaagaagtggagactcaaaagtcagcacctgctgataagagtcttgagattcagacagtt
gctgagaaccagccacttgagcccgagtcatcaccatcagcaccccatgcagacactatc
ctcctggagccagtttctcctacttcttccagtgatcttccttgtagccctgatgacagt
gtaaaaacagatgccggctcagtagtttctgcagactcaaaaacagaggaatcacagcct
ccatcagatcaggttgaccagggtactgcggatccctctgaaccgtcagctgtcagttct
gaacctaagagctctaccccttctgattcttcaccctccccatcctcgaaggaagtactc
atagagcataaagacacaaaggtggaggaccgtcaaagtgataccccctctcctccggtc
agcgctttctcctcaggaacctccaccaccagtgacattgaagtgctggaccatgagtct
gtgttgagtgagagctcagccagctccagacaggaaacaggggagggcaaggctggcctt
cacctaatgcagggctccttccagcttctcagtgcctccacctgtggagatttcccccgt
ctggaggactactccaaactcacagagagctgcggctcctcctcggatgcatttgagcgt
atagattcattcagtgtgcagtcgttggatagccgcagcgtcagcgaggttaactcagat
gatgagatccctggcagtaggacactagcgtccgtcactgcaggcccggctcctttaacg
gtgtcatcagctgtatgtcagcagaaggaagatggagtgggggagaaggtaggagaggga
aaagaggaggaggaggaggaagaggggtttactgaaacagtgagggagcagtcgctggat
gagatggaggagagtggacggagtgcgacgcctgttaatagtgagcagcctgaagagctg
acagaacaggaacagggatctgaggctaatgccacagtgtttgagcccacctccaaagct
gaggaacagatcacgcaaccaatcacagaagagatgaaaagtttctcaacagttcagatt
ttggagcttcaaaaggtcattgatgagctgtctggccgtcttgagaagagagagtcccag
ctgctggcagtcagcaaagacaaggccaggctggaggaggaatgtgacaatctcagagat
gaagtggtaagcctgaaggaggagagctccactgttcagtcactaaaggacgagttcacc
cagcgcatagcggatgcagagaggaaggctcagctggcctgcaaagaaagagacatagcc
aagaaggaaataaagggcttgcgagaagagctttctacaagactcaacgccagtgataca
atggagatcatcaaagagaaggaggagcagatccgaggcctgctggaagaaggtgaaaag
ctgtccaagcagcagctgcagcacagcaacatcatcaagaaactgcgtgtgaaggagaag
gagagtgacacaaagaccattaagcaacagaagaaaatcaaggagcaggaggatgagctc
aggcaactgcagcaggttctagatgggaaggaggaggtggagaagcagcacagggagaac
atcaagaagctgaacggtgtggtggagaggcaggagaaggagctgagcaggctgcagaca
gacgctgaggagctgcaggagcagaacaggagtgtccaggctgctctagacaactcttat
aaggagctggcagagctacacagggcgaatgccagcagagtcagtgatgccgaagaagca
gcccttagcagggaaacgcaggccaaggagcagctgagcctggctcttgagaaggccaag
gaggaggccaggatgcagcaggaggccctggccaatcaggtggctgacctgagactggct
ctgcagagggccgagcaacagcaagcaagaaaagaagattatttgagggaggagatcagt
gagctgcagcagaggcttcaggaggcagagactaggaaccaggaactcagtcagagtgtt
acctcagctacacggccactactgcgacagattgagaacttacaggcctcattgggcgga
cagacagcatcctgggaaaaactggagaagaacatctctgataggcttgcggaggcccag
gcacagctggctgttgctgtggagaaggagcgatcagcagcagaggagctgctgtccatc
aagtcccagctggcctctntggattcccagaattccttgctccgccaggagaaggcccga
ctcctggcacagctggaggctgagaagaacaagagagagaaactggaagatgagaccagc
agggagcatgttgagctggaaaatctgcgaggagaacacattcggatgcaagaagatgcc
aagaaagaaaagctgctgctgaccaatcaattagagatggagaagatgaaggtggagcaa
gagaagaagaagtgctacttggcacaagaggcactcaaggaaaaggagaggaaggctatg
agccactctgtaggagagcctccagcctcctccacgccctccctgtctcgctccagctcc
atcagtggggcagacaatgctggtctgcacacctctattctttcccaggatgactcttta
gaccactctctggctaccatgaccatgtctgtgtcgatgagcgggaccaacctgtacgag
gctgccaggctgtctggaggctccagcattgtggagaacctccaatctcagctcaaactc
agagaaggagagatagcacagctgcagcttgagatctccagtctagagaggagtcgttct
gtgatgtctgaggagctagtccgactcaccaatcaaaacgatgagatggaggagaaggtg
aaggagatccccaaattaaaagttaatctgaaggaactggagcagaggcacaacaccatc
ctgcagatgtatggagaaaaggctgaagaggccgaggagcttagactggacctcgaagat
gtaaagaacatgtacaaaacccagattgatgaactgctgaagaaccagaaataa
DBGET
integrated database retrieval system
