Micropterus salmoides (largemouth bass): 119885999
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Entry
119885999 CDS
T07309
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119885999 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119885999 (smarcd1)
03036 Chromosome and associated proteins [BR:
msam03036
]
119885999 (smarcd1)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119885999 (smarcd1)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119885999 (smarcd1)
PBAF complex
119885999 (smarcd1)
GBAF(ncBAF) complex
119885999 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
119885999
NCBI-ProteinID:
XP_038552351
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAARGGFQTAPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMVPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagacggcaccgaccggaggtggtggtggagcaatggga
ccaggaccaccggtaccgggcgcaggacccggcatgggccccggaactccttctggaagg
atggtaccgtcctcggccgcgcagaaccacatgtaccgctccccgatgcccgggcctggg
tacccgagaccaggcatgcctccatccagccgtatgaccccacagggaccagccatgggc
cccccaggatatggcaacagcccagtgtctcgccctgtgatgcctggcgtgatggacccg
tctcgcaagaggcccgccccccaacagattcagcaggtgcagcagcagaaccgcaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctgctggcttttgagaggaagctggaccagaccatc
atgcgcaagaggctggacattcaggaggccctcaagaggcccattaagcaaaagagaaag
cttcggatcttcatatccaacaccttcaaccctgcaaagccagatgctgaggatggcgaa
ggcacagttgcatcatgggagctacgtgttgaggggcgtctactggaagatacggccgta
tccaagtatgaagccacaaaacagaagcggaagttctcctctttcttcaagtctctggtg
attgagttggacaaggatctgtatggtcccgataatcaccttgtggaatggcacaggact
gccaccacccaagagactgatgggttccaggtgaagaggcctggtgatgtgggtgttcgc
tgcaccgtcctgctcatgcttgactaccagccccctcagttcaagctggacccccggctg
gctcgaatgctgggtatccacacccagaccagacctgtcatcattcaggccctgtggcag
tacgtcaagacccacaaactccaagatcctcatgagcgcgagttcattaactgtgacaaa
tacctgcagcagatctttgagactcagcgaatgaagttttctgagatcccgcagcgcttg
catgcactcctgatgcccccagagcccatcatcatcaaccatgtgatcagtgtggaccct
aatgaccaaaagaagactgcctgctatgacattgacgtagaagtggacgacacactgaag
acccagatgaactccttcctgctgtccacagccagtcagcaggaaatagcaggactggac
aacaagatccatgaaaccattgagaccattaaccagctgaagacccagagagagttcatg
ttgagttttgccagagatcctcagggctttatcaacgactggctgcaatcccagtgcaga
gacctcaagacgatgacagatgtggtaggaaacccagaagaagagcgaagagcagagttt
tactaccagccctgggctcaggaggcggtctgtcgctacttctactccaaggtccagcag
aggcggcaggagctggagcaggcactcggcatcaggaacacctag
DBGET
integrated database retrieval system
