Micropterus salmoides (largemouth bass): 119886018
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Entry
119886018 CDS
T07309
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119886018 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119886018 (nfasca)
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
L1 family
119886018 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_VEGFR-1-like_5th
C2-set_2
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
119886018
NCBI-ProteinID:
XP_038552386
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MLGQGGHVALALVSLLLLWHKAAPIEVPQDPKIQQDLKQPPTIVVQSVKDYIVDPRDNII
IECEAKGNPGPTFSWRRNGKFFNIAKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCFA
SNDFGVALSNKILLRVSKAPLWPKEVLEPVVVTEGSPLILPCNPPPGLPPPFTFWMNSAM
NPIPQDKRVSMGLNGDLYFSNVLAKDAHTDYSCNARFLFTHTIQQKNPFTLKVLTTEPYN
DTSYNATDPYGGRKVAETTPTFLSPSGSESSKMVLRDEQLLLECIAAGLPTPTIKWFKKG
GDLPGRKVKFENYNKTLKIINVSEEDAGEYVCMANSHLGSIRHSIFVQVKAAPYWLDKPT
NLVLAPDENGRLVCRANGNPKPNIQWLINGQPIDSSPPSLSRQVLGDTIIFRSVQMGSSA
VYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELRW
FKNGQGSGLDGGQYRVYINGTLEIKRARVEDEGTYTCVANSILGTAENQVRLEVKEPTGI
VRAPEHQTAIRGSTARFDCKVKSDPSLPITVAWTKDDKPLYLGWRLRKDEDSLTIPNVNE
GDEGTYTCTVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPMDLDLSDPAARSV
RLTWIPGNDHRSTITQFLVQFEEDRWEPGRWQDLSTYPGDLNSVILQLAPFVNYQFRVIA
INAVGQSQPSAPSPRYKTSGAAPDAIPRGLRGWGSKKDNMEITWEPLLDLERNGPNLHYN
VWWRRKDLGEEWSNMTTVGSKHVIHNTETYVPYEIKIQARNEFGPGPESNVVIGYSGEDK
PTDAPTDLRVSKVDNTKANIHWKPVDLNSLQGEFKEYRLYYWRESSLVPGLVVSKKKKTT
GFYSTMAEPSGILSDLVPYSKYKMFMVVANNRFESPPSNTVEFTTKEGVPDAPRFFRINR
RNFDTIHLEWDKPLEPNGILIGYQLRYQTVNGSRVGRLQVETFLPNVTEFTFRLPDRSTR
YKFYLSALTQVGAGEVFAEESPHFANEENFTDATGLVELTDASVGSAFTPTAPPLAPLPP
TTITPTTISTSTSTTPTTTTSTTPTTTITTTTPSTTTTTEATTTTTPPVPVTTKRRDQNV
FVAPGREIWNLTVEPNSNYANVSWRHNFPAGSSEFVLEFTLDSDKTVKVVPVKQQPPITV
ADLIAGTKYHLRVYSHELNSVSSKSVTFKTKAAYIDQVDIATQGWFIGLMCAIALIILIL
LIVCFIKRSRGGKYPGGGCMTGFEKYLVRDKKDLPLDPVDQKDQEGSFDYHSDEDNKPLQ
GSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVN
AIYSLA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcgggcatgtggccctggctctcgtgtcattgctactgctgtggcac
aaagcagcacccattgaagtcccacaagacccaaagatccaacaagacttgaagcaaccc
cccactatagtcgtacagtcagtgaaggactacattgtggaccctagagataacatcatc
atcgagtgtgaggccaagggcaacccagggccaacgttctcatggcgaaggaacgggaag
tttttcaacatcgccaaagatcccagggtgacgatgcgaaaacgctcaggaactctggag
attggtttccgtagtggaggacgaccagaggactatgaaggagagtaccagtgttttgcc
agcaatgactttggagtggctctgtccaacaaaatcctgctccgggtctccaaggctcct
ttgtggcctaaagaggtgctggagccagtggtggtgactgaaggctccccgctgattcta
ccctgcaaccccccaccaggcctgcctcctccgttcaccttctggatgaacagcgcgatg
aatccgatccctcaggataagagagtgtccatgggtctgaacggggacctgtacttctcc
aacgttttggccaaagacgctcacactgactacagctgcaacgctcgcttcctcttcaca
cacaccatccagcagaagaaccccttcaccctcaaagttctgaccacggagccgtataat
gacacatcttacaatgccactgacccctacggtggccgtaaagtagctgagaccacgccg
acgttcctctcaccttcagggagtgagagctctaaaatggtgctacgagacgagcaactg
ctgctggagtgtatcgctgcaggacttccaacgcctactatcaagtggtttaagaagggt
ggggacctgcccggaaggaaagtgaagtttgagaactacaacaagaccctgaagattatc
aacgtgtcagaggaggatgctggggaatatgtatgcatggccaacagtcatttaggcagc
atacgccactccatcttcgttcaggtcaaagcggcaccttattggctggacaagcctaca
aacctggtactagccccggatgagaatgggcgcctggtgtgtcgggccaatggcaaccct
aaaccaaacatccaatggctgatcaatggacaacctatagacagctctccccccagcctg
agcagacaagtgctgggtgacacaatcatctttcgctcggtgcagatgggaagcagcgcc
gtctaccagtgcaacgcctccaaccagcatggctatctgctggccaacgccttcgtcagc
gtccttgatatgcctccgaggatgcttggccctaaaaaccagctaattaaagtcatcgag
aacaaccgcaccttcctggattgtcctttctttggttcccccctaccagagttacgctgg
tttaagaatggacagggcagtgggctggacggcggtcagtaccgtgtttacatcaacggc
actctagagatcaaacgggccagagtagaagacgagggcacctacacctgtgtggccaac
agcatcctgggcacagcagagaaccaggtccgcctggaggtcaaagagccaactggaata
gtccgcgccccagagcaccagacagccatcaggggctccacggctcgctttgactgtaag
gtgaagtcagatcccagcctacccattactgtggcctggacaaaggatgacaagcctctc
tacctgggatggaggctgaggaaagacgaggactcgctgaccattcccaatgtgaatgag
ggcgatgagggaacgtacacctgcactgttaaatctgagatagaccaggactcagcctca
gcccgcctcactgtgttagaggaagcctccctcaacccctcagtctctagtgccttgcct
ccagaccgtccagaccctcccatggatctggacctatctgacccagcagcccgcagcgtt
cgcctcacctggatccccggaaacgaccacaggagcacaatcacacaattcttggtccag
tttgaggaggaccgctgggagccaggcaggtggcaggacctgtccacttaccccggagac
ctcaactcagtcattctacagctcgccccattcgtcaactaccagttcagggtcatcgcc
attaacgcagtgggtcagagtcagcccagtgccccctcgccacgatacaagaccagtgga
gctgccccagatgccattcccagaggtctacgaggatggggctccaagaaggacaatatg
gagatcacctgggagcctttgcttgatctagaaagaaatggcccaaacctgcactacaac
gtgtggtggagacggaaggatttgggagaggagtggagtaatatgaccacggtggggtct
aaacatgttatccacaacacagaaacctacgtgccttatgagatcaaaatccaggccagg
aatgagtttggaccaggacctgagtccaacgtggtcattggatactctggagaggacaag
cccaccgatgctcccactgacctgcgggtgtcaaaggttgacaacaccaaggctaacatc
cactggaagcctgtggacctaaactctttgcagggagagttcaaggagtacagactgtac
tactggcgtgagtccagtctggttccgggtctggtggtcagtaaaaagaagaagaccaca
ggtttctacagcaccatggccgagccgtctggcattctcagtgacctggtgccctactct
aaatacaagatgttcatggttgtggccaacaaccgctttgaaagtccacccagcaacacg
gtggaattcaccaccaaggagggagtgccggatgcgccaaggttcttcaggattaaccgg
agaaattttgacacaatccacttggaatgggacaaacctcttgagcccaatggcattctg
attggataccagctcaggtaccaaacagtcaatggctccagggttggtcgtctccaggtg
gaaactttccttcctaatgtgacagagttcaccttccgcctgcctgaccgatctacccgc
tacaaattctacctgtcagcgctcacccaggtgggagcaggggaggtctttgctgaggag
tccccacacttcgccaatgaagaaaactttactgacgctacaggtctagtcgagctaacc
gatgcctctgtgggttcagctttcactcctactgctcctcctcttgctcctcttcctcct
actaccatcactcctacaaccattagtacctcaacttctaccacccctacaactacaacc
tctactactcctactactactattactactactactccttctacaaccactacaactgag
gcgaccactaccaccacacctcctgtgccggtcaccaccaagcgtagagatcagaacgtg
tttgtggcccctgggcgggagatctggaatctgacggtggagcctaacagtaactacgct
aacgtcagctggagacacaacttcccggccggcagcagcgagtttgtgctagagttcaca
ctggacagtgacaagacggtgaaagttgtaccggtgaaacaacagcccccaattacagtg
gcggatctgatcgcaggcaccaagtaccatctgagggtttactcccatgagctcaacagc
gtcagcagcaaatctgtcacctttaagaccaaagcagcctacatagaccaggtagacata
gccactcaaggctggttcattggcttgatgtgtgccatcgccctcatcatactgatcctc
ctcatcgtctgcttcatcaagaggagtcgcgggggcaaatacccaggtggtggttgcatg
actggtttcgaaaaatatctagtccgtgacaaaaaagatcttcccttggacccagtagat
cagaaagaccaggagggatcctttgattaccacagcgatgaagacaacaagcctctgcag
ggcagccagacatccctggatggcaatgtgaaggaaagcgatgacagcctggtggactac
ggcgagggcggtgatggccagttcaacgaggatggctctttcatcggccagtacactgtg
aagaaggacaaggacgagacggagggcaacgagagctctgaggccacctcgcctgtaaac
gccatctactcactggcatag
DBGET
integrated database retrieval system
