KEGG   Micropterus salmoides (largemouth bass): 119886131
Entry
119886131         CDS       T07309                                 
Symbol
ubap2a
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-associated protein 2a
  KO
K26545  ubiquitin-associated protein 2
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119886131 (ubap2a)
   03400 DNA repair and recombination proteins [BR:msam03400]
    119886131 (ubap2a)
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    119886131 (ubap2a)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119886131 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N Methyltransf_32 UBA_8
Other DBs
NCBI-GeneID: 119886131
NCBI-ProteinID: XP_038552594
LinkDB
Position
Unknown
AA seq 1252 aa
MMSSLGGDKARGPREKVLPAAAHTSQPQKQIQATAEQIRLAQMIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVSRAINFLLESTSDMTSWETVGKKKPLVKEGPSESKENKE
NREKKGEREASKGRAAANRKGKVASRSRQARPEENGVEVTPVDRGSDRGRRVRGGRGAGG
RGRGRAPAGSRFSAQGMGTFNPADYTSQAGTGTTQTEVWDTVANNSTDGTVAWRNTMEDW
TPEDWSEDVSLSETKVFTSSCAPAAENHITPGQSLDLTSLLQKPVGGGREPPSSSSSQSL
VFTNSHHHQPPHQQQPQPPPIRNATSSTSYAHAALSSVLGAGFGDLGQIKRTQPSAGAQI
LEQLKGPGLGPLPSSQAAPPASTQGSNVSIGRLPGLGAPVPPPSSSTWDIKASESNTTSL
SSQFSREFGLQPEPSLVLSQLVQRHTGPSLPLARQPSPPSQQQAPPALASPGPQHISTPA
QAGPVMAGAKPPAPSAGLDPQGSSTPQQQRAQLRGQKRRIPPTSKIPSTAVEMPGSADVP
GLNLQFGALDFGSESALPEFGVVDNCVNVASRESTPASVPAPPAPGPGTQSQTSLYSKPL
SESLGSPLSVALPLPLSSSEPVYHSSSVALPSLPPSSLGTASSTNLPSSSSTSTTPPSVP
SSHFSTVGGSYDGTMPPHTRLAFSQSKEATGPVMNGLNGVRTSAALDTSSASSTPKPESP
SLNISTNGASAPSSHLSSTLPAHNSNLAPDLPSANQLNALNSHVSSHSSVSALGSSSLTY
TSVDSSSINSLAPSSGSYTSSQPSVSALHSNHISSNSSSISHLANMPNMGNMSSVVGAIA
GTSGIHSAAATSTVLGLGSNGATATSNLTAPRTTALLSSATGKAPPNLSQGVPPLLPNQY
IMGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTATLSGRDGSIANNPYS
GEVTKFGRNDSTSPAPPTSLAAPQPPQGQSQGQSQTQPQPPQAQPQPQGQPQHHNSQQAF
LPPGYSYTGLPYYAGMPGAVPSAAAFPYGPTMFVPPGGPGPASAKQHSMGLGLGNPSASP
FQQQTQQQPSGYGQHTFSSGYEELTAGPAGVDYSKGYNSSSQAQAKSAATGPGKGVSVTS
SNSGVPDISGSVYNKTQSFDKQGFHAGTPPPFSLPSALGGPGPLNPGAAPGGYAPAPFLH
ILPHQQPHSQLLHHHLAQDGQGGPSQRGQSSNLQQKSQVNKSSYGSSPYWAN
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcggcgacaaggcccggggccctcgggaaaaagtgctgcctgct
gccgctcatacatcacaaccacagaaacagatacaggctactgctgaacagatccggctc
gcccagatgatctatgacaagaatgatgctgactttgaggacaaagtcaaccagctgatg
gaggtgactgggaagaaccaggatgagtgcatggtagcgctccacgactgcaatgaggat
gttagtagagccatcaacttcctcctagagagcacctcggacatgacctcatgggagacg
gtagggaagaagaagcccctagtgaaggagggtccatcagaaagcaaggagaacaaggag
aacagggagaaaaaaggagagagggaggctagcaagggccgtgcagctgccaaccgcaag
ggcaaggtggccagtcgcagccgacaggcacgtccagaggaaaatggcgtggaggtgact
ccagtggacagaggttcagatcgaggtcggagggtcagaggtggccgaggagctgggggt
cgaggcagaggcagagcaccagcaggaagccggttctcagcccagggcatggggacgttc
aatcctgcggactacacctcacaggctgggacagggaccacacaaactgaggtgtgggac
acggtggccaacaacagcacagatgggacagttgcctggaggaataccatggaagactgg
acacctgaggactggagtgaggatgttagtctctcagagaccaaagtgttcacctcctca
tgtgcacctgctgctgagaatcacatcacacctgggcaaagtctggaccttacctctcta
ctgcagaagcctgtgggaggaggaagagaaccaccttcctcctcttcctctcagagtctg
gtcttcaccaactcccaccaccaccagccaccgcatcagcagcagccgcagccgccccct
atccgcaacgccaccagtagcacaagctacgctcatgctgctctgtcgtcagttctggga
gctggttttggggacttgggccagatcaaaaggactcagcccagcgctggagctcagata
ctggaacagctgaagggtcctggcttgggtccactaccctcatcccaggccgcgccacct
gccagcacccaaggaagcaatgtctccattggccgactgccaggcttgggagcacctgtg
cctccaccctcctcatccacctgggacataaaggcctcagaatccaacaccacgtcgctg
tcctcgcagttcagccgtgagtttggcctgcagcctgagccttctcttgtattgagccag
ctggttcagaggcacactggcccctccctgcctctggcacgtcaacccagtcctccatca
caacaacaagcgccccctgctttagcctcgcctggtccccagcacatcagcacgccagca
caggcaggcccagtaatggctggtgctaaacctcctgcccccagcgcagggctggaccct
cagggcagcagtacgccacagcagcaacgggcacagctcagaggccagaaacgaaggata
cctcccacatcgaagatcccctccacagcggtagagatgccaggctcggctgacgtcccc
gggctaaacctccagtttggagcgctagactttggctcagagtcggcattgccggagttt
ggagttgtggacaattgcgtgaatgtggcatcaagggagtccacgccggcctctgtccca
gcaccacctgcaccaggaccagggacacagagccagacaagcctgtactccaaaccgctc
agtgagtcgctgggaagtcctctctccgttgccctgcctctgcccctctcctcatcagag
ccagtatatcactcctcttcagtggcgttgcccagcctccctccttcctcattagggact
gccagctccaccaacctaccatcatcttcatcaacctcaaccacccctccttctgtaccc
tcctctcacttctccacagtgggcggaagttacgatgggaccatgccccctcacacacga
ctggccttttcccagagcaaagaggccacagggccagtcatgaatggtctcaatggtgta
aggacgtctgctgctttagacacttcatcagcgtcctccacaccgaagccagagtcgccg
tctctgaacatcagcaccaacggtgcctcagcaccctcctcccacttatcatccacactg
cctgcacacaactccaacctggcaccggacttgccttcagccaaccagctcaatgcactc
aacagccatgtcagcagtcattcctcagtttcggctctgggctccagctctctcacttac
accagtgtggacagcagcagcattaactctctggctccatcctctggctcttacacgtca
tcacagccctccgtctcagcgctccactcgaaccacatcagcagcaacagtagcagcatc
agccacctggccaacatgcccaacatgggcaacatgagcagcgtagtcggcgctattgcc
ggcactagtggaattcactctgctgccgccaccagcacagtgctgggacttggctccaat
ggagctactgccacttccaacctcactgcaccacggaccacagccctgctctcctctgcc
actggtaaagctcctcctaacctgtcccagggagtgcctcctctactgcccaaccagtac
atcatgggcccaggggggctgctgccagcatacccacagatatatggctacgaagacctc
catatgctccagtccagactgccaatgccctcgttgcaggattactatggaatcacattc
cctggacccacagcgactctctctggcagagacggaagcatagccaacaacccctactca
ggtgaagtcacaaagtttggcaggaatgactccacctccccggcacccccgacaagcctt
gcggccccgcagcctccccagggccagagccaaggacagagccagacccagcctcagcct
cctcaggcccagcctcagccccagggccagccacagcaccacaacagtcagcaggctttt
ctgcctccaggctacagctacacaggcctgccttactacgctgggatgcccggcgccgta
cccagtgctgctgccttcccgtatggccccaccatgtttgttcctcccgggggcccagga
ccagcctcagccaagcagcacagtatgggccttggtctgggaaatccctcggctagcccg
ttccagcagcagacacagcagcagcccagcggctacggccaacacactttcagctcaggg
tatgaggagctgacagcagggccagcaggagtggactacagtaaaggatacaactcctcc
tcacaggcacaagccaaatctgctgctactgggcccgggaaaggcgtctcagtgacgtcc
agtaactcgggcgtgccagatatcagtggaagtgtttacaataagacccagtcttttgat
aagcaaggattccatgcagggacccctcctcccttcagcctgccatcggcactggggggt
ccagggcctctgaaccctggagcagctcctggaggctatgcaccagccccgttcctccac
atcctgcctcaccagcaaccgcactcacagctgctgcaccaccatctagctcaggatgga
cagggtggtcccagccagcgtggccagtccagcaacctgcagcagaagagccaagtcaac
aagtcgagctacggcagctccccctactgggccaactga

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