Micropterus salmoides (largemouth bass): 119886142
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Entry
119886142 CDS
T07309
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119886142 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119886142 (smarcc2)
03036 Chromosome and associated proteins [BR:
msam03036
]
119886142 (smarcc2)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119886142 (smarcc2)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119886142 (smarcc2)
PBAF complex
119886142 (smarcc2)
GBAF(ncBAF) complex
119886142 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
119886142
NCBI-ProteinID:
XP_038552605
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSPDIEQKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDMDEASPVPASEEGNPAKTN
NAKKDSDSTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQQMISFPDKVKDKPADLQNFGLRTDMYSKKSGSVKSKSAASSMRDWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDNSSSMGPLAYQPI
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGDRPDESSDESKSDGQSGEEKREAKESKDGAAEEEEK
QAENGKKEEERGREQEGEREADKTESEMGDGEKEKDGKEGTEEGQREAESEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHSNQAA
SGPPPQGPTATQQAPSTPAPQPAPSPVPPASSAPAPESQPPQGAHTSPPCPPGQAPAAHS
SSSSSTTPVLHGLCQKVSENSEKSQEPTAPLPGETLHPSAPVPPPQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gccgagccccccaccaacaagtctctgtctagcctggtggtccagctgctccagttccag
gaggaggtgttcgggcgacatgtcagcaaccctccgctcaccaagctgccaatgaaatgt
tttctggacttcaagtcaggaggggctctctgccacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtggagatgttcatgacaattgagaagtccttagtgcagaacaactgcctgacgagacct
gtcatctacctgagccctgacatagagcaaaaactgcttgggaaactgaaagacatcatc
aaaagacaccagggctcagtgactgaggacaaggcctccagctcccatgttgtcgttcct
attcccaccagcctggaggaagaggagtgggtgcgtcccgtgatgaagagagacaagcaa
gtgctgctacactggggatattttcctgacagttatgatacctggatcccagccagtgag
attgaggctgctgtggaggatcctcccagcccagaaaagcccaggaaggttcatgccaag
tggattttagacctggaccagtataacgagtggatgaacgaggaggactatgaagtgggc
gagggctgccctaagaggaagaggatctcagccaagaccctgacggacgaggtgaccacg
cctgacgagcgcagggacaaaaagcctggtagtgccaagaagaggaagcgctcaccgtca
ccttcccctacacctccgccccaggagagcaagaagaagaacaccaaaaaagggccaacg
accccatacaccaaatctaaacggggccagagggaggaggaacaggaggatcttagtaag
gacatggatgaagcgtcacctgttccagcatctgaagagggaaacccagctaagacaaat
aacgccaagaaggactctgattcaactccagtaaagggaggaacagatatggatgagcag
gaggacgagtccatggaaacaacaggcaaggaggaggaggaaggatctccgagtgtgaag
ggtgaaccggtgaaaggctcggaccttcacgaggacaatgtgactgagcaaacccatcac
attattataccgagctacgccgcctggtttgactacaacagtgttcatgccattgagcgc
agagccctgccagagttcttcaatggaaagaacaaatccaaaacacctgagatttacctg
gcgtacaggaacttcatgattgacacctaccgactgaaccctcaggagtacctgacctcc
accgcctgccgcaggaatctggcaggagacgtgtgcgcaatcatgagagtccacgccttc
ctggagcagtggggtctgatcaactaccaggtggactccgagagccggcccacacccatg
ggtcccccacccacctcccacttccacgtcctggcagacactccgtccagtctggtaccc
ctgcagcccaagacttcccagacccctgctacccagcagatgatatctttcccagataaa
gtgaaagataaaccagcagatctgcaaaactttgggctgcgaacggacatgtacagcaag
aagagtggctctgtaaagagcaagagtgcagcaagctccatgagggactggacagaacaa
gaaacacttctacttcttgagggcttggagatgtataaggacgactggaacaaggtttca
gaacacgtgggcagccgtacgcaggatgagtgcatcctgcacttcctgcggctgcccatc
gaagacccttacttggaggacaactcctcgtccatgggaccgctggcctaccagccaatt
cctttcagccaagcaggaaaccccgtcatgagcacggtggccttcctcgcctctgtcgtc
gacccgcgtgtggcctcagctgcagccaagtctgccctggaggagttttctcgcatgaag
gaggaggttcctgcagcacttgttgaggctcatgtgcggcgggtggaggaggcagcgagg
gtcagtggccgacaggacccgctgtacggcctggaggggagtggcatcgccggtaccggc
ctggaggagggagatagacccgacgaaagcagcgatgaaagtaagagtgacggccaatcg
ggcgaagagaagagagaggccaaggagagcaaagatggagcggctgaggaagaggagaag
caggcagagaatgggaagaaggaagaagaaagaggaagagaacaagaaggagaaagggag
gcggacaaaacagagtcggagatgggcgatggggagaaagagaaggatggaaaagagggc
acagaggagggacaaagagaagcagagagtgaaggggaaaggaaagctaaggtggagcgt
gacgtaggggaggggaacctggccactgccgctgcgtctgcgctcgctgctgctgctgtc
aaagccaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggctctgctg
gtggagacccaaatgaagaagctggagataaaactgcgacactttgaagaattggaaacc
atcatggacagagagagggaggcgttggagtaccagcgtcagcagctgctggctgaccgt
cagtccttccacatggagcagttaaaatacgctgagatgagggcccgccaacagcacttc
cagcagattcagcaccagcagcacagtcaggcaggaggccctcattccaaccaggccgcc
tcaggccccccaccccagggcccgaccgcaactcagcaagctcccagtacaccagcgccg
cagccggcccccagccccgtgcctccagcctcttctgccccagctcctgagtcccaacca
cctcagggtgctcacacctcgcccccctgcccccctggccaggccccagctgcccactcc
agctccagctccagcactactcctgtactccatggattgtgtcagaaagtgtcagaaaat
agtgaaaaatcccaagagcccactgccccgcttcccggggaaacactccacccctcagct
ccagtcccgcctccacagtga
DBGET
integrated database retrieval system
