Micropterus salmoides (largemouth bass): 119886274
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Entry
119886274 CDS
T07309
Symbol
sec13
Name
(RefSeq) LOW QUALITY PROTEIN: protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam04141
Protein processing in endoplasmic reticulum
msam04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119886274 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119886274 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
119886274 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119886274 (sec13)
04131 Membrane trafficking [BR:
msam04131
]
119886274 (sec13)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119886274 (sec13)
Membrane trafficking [BR:
msam04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119886274 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119886274 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
119886274 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_Vps41
Beta-prop_EML
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
119886274
NCBI-ProteinID:
XP_038552829
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCXSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGSWDKMYEYTGHESSVNSVCWGPYEFGLLL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQSEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgttatcaacacggtggacacctctcatgaggacatgatccatgatgcccag
atggactactatggtacccggctcgccacctgcntctccgaccgcactgtaaagatcttt
gatgtcagaaatggaggacagatcctggtggcagacctcagaggccacgagggtcccgtg
tggcaggtagcctgggctcacccgatgttcggtaacattctggcttcctgttcctacgac
cgtaaagtcatcatctggaaggaggagaacggatcctgggacaagatgtatgaatacacc
ggacatgagtcatcagtgaactctgtctgctggggtccctatgagtttggtctgctcctg
gcctgcggcagctcagatggagccatttcccttcttacattcactggggatcagcagtgg
gacgtcaagaagatcagcaacgcacacactatcggttgtaatgcagtgagttgggctcct
gctgtagttccaggcagcctgatcgatcagccgtcaggacagaaaccgaactatgtcaaa
cgcttcgtctccggaggctgcgacaacctggtcaaactctggaaagaggaagacggccag
tggaaggaggatcagaagctggaggctcacagtgattgggtgagagacgtcggctgggct
ccatctattggtcttcccaccagcaccatcgccagctgctcccaggacggacgtgtgttc
atctggacgtgtgacgaccccgcaggcaacacctggacggccaaactgctccataagttt
aatgatgttgtttggcacgtcagctggtctatcactggaaacatactggctgtttctgga
ggagacaacaaggtgacactgtggaaggagtcgatggacggtcagtgggcgtgtatcagt
gatgtcagcaagggccagggggccgtctccaccatcacagacacacagcagagcgagcag
tga
DBGET
integrated database retrieval system
