Micropterus salmoides (largemouth bass): 119886376
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Entry
119886376 CDS
T07309
Symbol
shq1
Name
(RefSeq) LOW QUALITY PROTEIN: protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msam03009
]
119886376 (shq1)
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
119886376 (shq1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
119886376
NCBI-ProteinID:
XP_038553001
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MITPAFDLSQDPEYLIVSIRVPYTRTSEFDLYIDGTDFKFYAKPYFLRLSLPGRIVEDGR
EKATFDIDKGLFTLRVPKETAGEHFEELQMLTSLLAPKGSRSAKPLIEDLSAGCSENVGE
DEDEDEEEFDWQVEQEVFKESTEEELRAQQKYGFGNQRSGVFARLQEELSDVTDVKNPEG
TSAAERRQARLDAEASAFSPDHYLADLFENDEIKGLLKFRPWWAKLSPSTEQGGEAAVSF
TDDEKEQLRKFTNRSYLLDKTSRYQVWLSLVDILLAYSYEVRSTEGEHNVESPWTIRKLS
GTLCWLETYSSLQDVLVSFGRRVLCYPLYRHFAMASAAIRDTTKILQSGKACVLKCLLDI
HKVFRENDPAYILNDLYITDYCIWIQRVKSKKMTALVATLNKASLRKKDLKLDLEELEEA
ATMVVEEEEQGPSESAPISRDDCSSSCSDSSSSSSSSSDSSDESEESEGGGGGEMSKDNP
PQPHSTSSASLIPQEPSSTLCSAERKVDALXSATEGSRQLIQELGERVAEELQISQDSSY
KAESNCSQLNSAAAKTEVTSGRSSSGTLLEPSPRRNPLLIVQTRQDLDESDFIC
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatcacccctgcgtttgacctgagccaagatcccgagtacctgatcgtcagcatccgc
gtaccctacaccagaacctcagagtttgacctctacattgatggaacagatttcaagttc
tatgctaagccctacttcctcagattatctcttcctggaagaattgtggaggatgggaga
gaaaaggccacatttgacattgacaaaggtctcttcactcttcgggtccctaaggaaaca
gctggagagcactttgaagaactacagatgctgacaagtctcctcgcaccaaaaggctcc
cgttctgcaaaaccgttgatagaggacttaagcgcaggatgcagtgaaaacgtgggagag
gatgaggatgaagatgaggaagaatttgactggcaggttgagcaggaggtgttcaaggag
agcactgaggaggagctgagagcccagcagaagtatggttttggcaatcagaggtctgga
gtgtttgcaagattacaggaggaactgagcgatgtgactgatgtcaagaacccagaagga
acttcagcagcagagaggaggcaggcacggctggacgcagaggcatctgctttttctcct
gaccactacctggcggatttgtttgagaatgatgagataaaggggcttctgaagtttagg
ccatggtgggcaaagctgagtccttctactgagcaggggggagaagctgctgtatcattc
accgatgatgagaaggagcagctgagaaaattcaccaaccgctcctacctgctggacaag
acgtcccgttaccaagtgtggctcagtcttgtggacatcctgctggcttattcttatgaa
gttcgctctacagagggagagcacaatgtagagtcaccgtggactatccgaaaactcagc
gggactctctgctggctggagacgtacagctccttacaagatgtcctggtgtcatttgga
cggagggttttgtgctaccctctgtacagacactttgccatggcctctgcggctattcgt
gacacaactaagattttgcagtcagggaaagcctgtgtcctcaaatgcctgctggatatt
cacaaagtcttcagagagaacgacccggcctacatactgaacgatctgtacatcacagac
tactgcatctggatccagagggtcaagtccaagaagatgacagccttggtcgcgacatta
aacaaagcctccctgcggaaaaaagacttgaagctggatcttgaggagctagaggaggca
gcgacaatggtggtagaagaagaagagcagggaccttccgagagcgctccgatatcccgc
gatgactgcagcagctcttgcagtgacagcagcagcagcagcagcagcagcagcgactcg
tctgatgagagtgaggaatctgagggaggaggaggaggagagatgtctaaggacaaccct
ccacagccccattccacctcctctgcctctctcatcccccaggagccctcaagcacactc
tgctcagcggagaggaaagtggacgccctcncctcagccacagaaggctccaggcagctg
atccaggagctaggggaacgggtggcagaggagttacaaatctctcaagactccagctac
aaagcagagagcaactgttcacagctgaacagcgctgcagcaaaaactgaagtaacatct
gggaggagcagcagtgggactttgttagagccgagccctcgcaggaaccctctgctcatc
gtccaaacacggcaagatcttgatgagagtgacttcatctgctga
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integrated database retrieval system
