Micropterus salmoides (largemouth bass): 119886518
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Entry
119886518 CDS
T07309
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119886518 (ift52)
Cilium and associated proteins [BR:
msam03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119886518 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
Motif
Other DBs
NCBI-GeneID:
119886518
NCBI-ProteinID:
XP_038553241
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MDKEQHNTVVFNFSKRELFTTNNGYKSMQKRLRAQWKIQSMKEELSLEKLKGVKLWITAG
PREKFTASELEVLKHYLDGAGNVLVMLGEGGEMKYETNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEEENVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFHQGKEAGKLAVLGSCHMFSDQYIDKEENSKIMDVVLQWLM
TDNIQLNQIDAEDPEITDYTMLPDAGCLSEQLRVCLQEGDENPKDFTSLFDTSLFNLSTD
TLPQVISAYKQLNVKDEQLQLITPQFETPLPKLQPAVFPPALSDLPPPMLDLFDLDETFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKDQRDAKHILEHIFFQVVEFKKLN
QEHDVDTETRFTPLRLDS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggaacagcacaacactgtcgtcttcaatttttcaaaaagagagctgtttact
actaacaatggatacaaatccatgcagaaaagattaagagctcaatggaaaatccagagc
atgaaggaagagctgtctttggagaagctgaagggtgtcaagttgtggataactgcaggc
ccgagggagaagttcacagcatccgagctggaggtactgaagcactacctggatggagca
ggaaatgttctggtcatgcttggtgaaggaggggaaatgaaatatgagaccaatatcaac
tttcttttggaggagtttggaataatggtcaacaacgatgctgttgtccggaatgtgtat
tacaaatacttccatcctaaggaggcgcttgtgtccaatggtgtgttgaacagagagatt
agtcgggctgctgggaaagtggtcacaggaatcattgaagaagaaaatgttggaaacaat
gcacaggctctcacatttgtgtacccatatggtgccacactgagtgtgatgaagcctgct
gtagctgttctttcaactggctcagtctgctttcccctcaacaggcctgtcctggccttc
catcaaggaaaggaggcaggcaaactggcagtgttgggttcctgccacatgttcagtgac
caatacatagacaaagaggagaacagtaaaatcatggatgttgtgctccagtggctcatg
accgataatattcagctaaatcagattgatgcagaagacccagagatcacagattacacc
atgttgccggatgcaggctgcctgtcagaacagctcagagtgtgtctacaagagggggat
gaaaaccccaaggactttacctctctctttgatacgtctttgttcaatctgtcaactgac
acgttaccccaagtcatcagtgcttacaagcagcttaatgtcaaagacgagcaacttcag
ctgatcacaccacagtttgagacgcctctgcctaaacttcaacctgctgtctttccacct
gccttaagtgatttacctccacctatgctggacctgtttgatctggatgaaacgttctct
tctgagaaagtgcgccttgcgcagctcaccaacaaatgtacagacgatgatcttgaattc
tatgtgcggaaatgtggtgaaattctgggggtgactccaaagttagataaagatcagagg
gatgccaagcacatcttggagcacattttcttccaggttgtggagttcaagaaactcaat
caggaacatgacgtcgacacagagacacgattcactccactgcgattggattcatga
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