Micropterus salmoides (largemouth bass): 119886569
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Entry
119886569 CDS
T07309
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b isoform X1
KO
K14960
COMPASS component SPP1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119886569 (cxxc1b)
03036 Chromosome and associated proteins [BR:
msam03036
]
119886569 (cxxc1b)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119886569 (cxxc1b)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
119886569 (cxxc1b)
COMPASS/SET1 complex (yeast)
119886569 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
PIN-TPR-GreABC
DUF7813
MutS_IV
Motif
Other DBs
NCBI-GeneID:
119886569
NCBI-ProteinID:
XP_038553313
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MDSEMSDIDPIPGPETSSMEGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCINITEKK
AKAIREWYCMRCRDKNPTLEIKYRSKKSREKEAEADRETQYSTPSTPDYKSERRRGSKVK
RSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCEVRARKMLRVKDEEM
SLQERRDNYHRRRRYSDDYDSEADLYQQYKAAGLDSNMVWASDDDDEPPFSPVMRKKAVK
VKHVKRREKKFDKKKESRRHKQKQKHKDRTRYSEKGDLRDNGGQRQCLGPSCVEAARSNS
KYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQLERIRREQQNARLRLTEME
RRFHELEGIIAKAKQQAVQQDEEVNEGDSEDTDLQIFCVSCSHPINPKVALRHMERCYAK
YESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGCPL
VKNVFELTGDYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTN
RAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaaatgtctgacattgaccctatacctgggcctgagaccagcagtatggag
ggggagaacgcaccactgtactgtatctgccggaaaccagacatcaactgcttcatgatt
ggctgcgataactgtaatgagtggttccatggccactgcattaacatcaccgagaagaag
gcgaaggcaatccgagaatggtactgcatgagatgcagagataaaaaccctacactggaa
ataaagtatagatcaaagaaaagccgcgagaaggaagcggaggctgacagagaaacacag
tacagcaccccaagtactccagactataagagtgaaaggcggcgtggatctaaagtaaag
cggtccgtccgaatgtgtggggaatgtgagccctgcagaaggactgaggactgtgctcag
tgtgacttctgcaaggacatgaagaagtttggaggtcccaacaaaatcagacagaagtgc
aggtttaggcaatgcgaggttcgagccaggaaaatgctccgcgtgaaggatgaggaaatg
tctttgcaagaaaggagggacaactaccacagacggagacggtactccgacgactacgac
agtgaggcggatctctaccagcaatacaaggcagcgggacttgacagcaacatggtgtgg
gctagtgacgacgacgatgagccaccttttagtcctgtcatgcgtaagaaagctgtgaag
gtgaagcacgtcaagagacgagaaaagaagtttgacaagaaaaaggagtcacgacggcac
aaacagaagcagaagcacaaagacagaactagatacagtgagaagggcgacctccgggat
aacggagggcagcgtcagtgtctggggccaagctgtgtggaggcagctagatccaactcc
aagtactgctctgaggactgtggcatgaagttagctgccaaccggatctatgagatcctc
cctcagcgcatacagcagtggcagcagagtccatgcatcgctgaggagcatggtaagaag
cagctggagcgcatccgtcgggaacagcagaacgcccggctccgccttacagagatggag
cgacgcttccacgaactggaaggcatcatcgctaaggccaagcagcaggcggttcagcag
gacgaggaggtgaatgaaggtgatagcgaggacacagacctgcagattttctgtgtgtct
tgtagtcatcccatcaatccaaaagtggcactgagacatatggagagatgttacgcaaag
tatgagagtcagacctcctttggttctatgtaccctacaagaatagaaggagcaaccaga
ctcttctgcgatgtgtacaatccccaaagcaaaacatattgtaagaggcttcaggttttg
tgtccagagcattccagagatcctaaggtcccagtggatgaggtgtgtgggtgtcctctg
gtgaagaatgtgtttgagctgacgggagattactgcagggtctctaaaaggaaatgcaac
aaacattacaactgggaaaagctcaggagagcagaggtggacttggaacgagtgagggtg
tggtacaagttggacgagctctttgaacaggagcgtaacgtcaggactgctatgaccaac
agagctggccttctcgctctgatgttgcaccaaaccattcagcacgacccgctgacaacc
gatctgcggtgcaacaaggataggtag
DBGET
integrated database retrieval system
