Micropterus salmoides (largemouth bass): 119886609
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Entry
119886609 CDS
T07309
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119886609
03015 mRNA surveillance pathway
119886609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119886609
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119886609
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119886609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
119886609
NCBI-ProteinID:
XP_038553382
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGNLQIREKPEENGTTADATDSSSAAASTEVQGEQDKTTED
DDKDDKAAQSLLNKLIRNNLVNNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYGM
GFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSP
TYELALQTGKVIEQMGKHYPEVRLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFKF
IDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVP
DPNIIKLKREEETLDTIKQYYVLCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLA
GELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDL
PVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRMSMNILNRIQEHFSKKIEKLDTDD
LDEIEKIAS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcccaagcggtggacgagcaagaagccgcggcggaatcgatc
ggtaaccttcaaataagagagaaaccagaggaaaatggcacgactgcagacgcgacagac
tccagcagtgcagctgcaagtacggaagtccagggagaacaggacaagaccacagaagac
gacgacaaagacgacaaagcggcgcagtcattattgaacaagctgatccggaataatctc
gtcaataacacgaatcaagtggaagttcttcagagggatcccaactccccgctctactca
gtcaagtcctttgaggagttgcgactaaaaccacaattgcttcagggcgtgtacggcatg
ggttttaatcggccatccaaaatccaggagactgctttacctatgatgctggccgaacct
ccacagaatctgattgcccagtcacagtcaggaacagggaaaacagctgcctttgtcctg
gccatgctcagtcatgtagatcccaacaacaaatatccccagtgcctgtgtgtgtcaccc
acctatgaactggcactgcagacgggaaaggtaatcgagcagatgggcaaacactatcct
gaagtcagactagtctacgccatcagagggaataaattgcagcggggcatgaagctgcag
gaacagatagttattggcacacctggtaccatgctggactggtgcagtaaattcaagttc
atagaccccaagaagatcaaggtgtttgtgctggacgaggccgacgtcatgatcgccaca
cagggtcaccaggaccagagcatccgcatccagaggatgctgcctaaaaactgccagatg
ttgctgttctcggccacctttgaggagactgtgtggaacttcgcccagcgcattgtgcct
gaccccaacatcatcaagttgaagagagaggaggagacactggataccatcaagcagtac
tatgtgttgtgcaacagcagggaggagaagttccaagccctctgtaacatctacggagcc
atcaccatcgcccaggctatgatcttctgccatacgaggaagactgcaggctggctggca
ggagagctgtccagagagggccaccaggtggcgctgctcagtggggagatgcaggtggag
cagagggccgctgtcatcgaccgcttcagagacggcaaggagaaggtcctggtcaccaca
aatgtttgtgctcgaggcatcgatgttgagcaggtttctgtggtgatcaactttgacctg
ccagtagacaaggatggtaacccggacaacgagacatacctgcacaggattggccgcacg
ggtcgattcggcaaaaggggactggccatcaacatggtggacagcaggatgagcatgaac
atcctcaacaggattcaggagcatttcagtaagaaaattgaaaaactagacacagatgat
ctggatgaaattgagaaaatcgccagctaa
DBGET
integrated database retrieval system
