Micropterus salmoides (largemouth bass): 119886771
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Entry
119886771 CDS
T07309
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119886771 (chd5)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119886771 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
119886771
NCBI-ProteinID:
XP_038553643
LinkDB
All DBs
Position
Unknown
AA seq
2003 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNAVPLTPLDSFFSDDSLKQQKKKKPKKMKE
GKMPKVKKRKKEGGIQARVDSDLEETSEVEEERGCPEIGSESESSMYGPTKKKKKKPKEK
KEKKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTAVSGSQPCSQLGPIKKAKTKEGKGPGVRKRSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEEA
PGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWTWGEPPLPAELPAGPDGKPNDPLTKPPLKGHPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERFYRYGI
KPEWMVIHRIVNHSYDKDGDVHYLIKWRDLPYDQCTWEVDDFDIPEYDSHKPCYWDHREQ
ILGEDQRPLVVKKGKKLKDDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYE
LITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
NEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGIELKKLTESLSSDPNTPVPASPVATQPGTPIPPEKSESLLGTAEDKET
TEQDSKKLSEQETGSAEPASVPEKAADSEESKASSEEKTGDERDRTESPSAKTEPSANPK
ESALKQTELSSSQTSPKRDHCKDTEKASEKGDTDSSLAKTEDKENKPAVADDVKSEDALE
GRLNGDKDTLDEMDESRKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDI
WHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKGNYLEMKNKFLARRFKL
LEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFTEVECLAESHQHLSKESLAGNKPANA
VLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQP
FSQGGFGCSQMYSSSFGGGFRGAGGQPMVNYSQMPLGPYVSVSSNGPPPPTSHLDKKSLD
SFRDTATPDLKSGKPSDVICIED
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtccctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaggatgacgaaggggagcgcaacgctgttcctctcacacccctcgacagc
ttcttctctgatgactctctcaaacaacaaaagaagaagaagcccaaaaagatgaaagag
gggaaaatgcccaaagttaagaagaggaaaaaggagggaggaatccaggcaagagttgac
agcgacctggaggagacctcagaggtggaggaggaacggggatgtccagaaataggttct
gagagtgagagcagcatgtacggcccaaccaaaaagaagaagaagaaaccgaaggagaag
aaagaaaagaagcccaggaagaagaagagagatgaggaagatgacgatgatgacgacgat
gacggaaacatgaaagaacccaagtcatccagccagttgatgcaagagtggggtctcgaa
gacgtccaatatggcttcacagaggatgattataaaaccatcactaactataaggctttc
agccagtttctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacagtgctaggggccaagtggcgggagttcagtgccaacaacccgttcaaaggcgca
tctgccaccgctgtggccgccgctgtggctgccgcagtggaaacggttaccgtagcacag
ccaacggctgtcagcggcagccagccgtgctctcagctggggccaatcaaaaaagccaaa
accaaagagggaaagggacctggagttagaaagagaagcaagactgtgaaggaggtgaag
aagaaacccaagccgaagaagaccaaatcaaagtcaggccaaagtgggaagaagaagaaa
gcatcctcgagtgaggaggacttcctggaggagtcagactttgatgacatcagcatccac
agtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcccgacgtggg
cggaaaaaaaggaaaaaggaagacggtgatggttatgagacagaccaccaggactactgt
gaggtttgccagcagggtggtgagatcatcttgtgtgacacctgtcccagagcgtaccac
ctggtctgcctggatcctgaactggagaaggcccccgagggcaaatggagctgtccacac
tgcgagaaagagggtatccagtgggaggccaaagatgaggaggaggaagaggaggaggcc
ccaggagaggaagaggatgaccacatggagttttgcagagtgtgtaaagatggaggagag
ctgctgtgttgtgacacctgtccatcttcataccacatccactgcctcaacccacctctc
cccgagatacccaatggggagtggttatgtccacgctgcatgtgccctcccctcaaaggt
aaggtccaaaagattctgcactggacatggggagaaccccctttgccagctgaactgcct
gcagggcctgatggcaaacccaatgatccactgaccaagcctccactcaagggccaccca
gagagggagttcttcgtaaagtgggctggcctttcctactggcactgctcctgggtcagc
gagctgcagttggagctgtatcacacggtcatgtatcggaactaccagcgtaagaatgac
atggacgaacctccaccatatgactacggctctggagaggaggagcttaacagtgaaaaa
aggaagagcaaagacccccagtatgctgtgatggaggagcgcttctaccgctatggcatt
aaaccagagtggatggttatccaccggatagtcaaccacagttatgataaggatggcgat
gtgcattacctgatcaagtggagagacctaccctatgaccagtgtacctgggaggtggat
gattttgacatcccagaatatgacagccataaaccttgctactgggaccacagggagcaa
atacttggggaggaccaacgccccctggtggtgaagaaaggaaagaagctcaaagacgac
catccgaagagggaggtccctcctgatgctcccatcatagatccaaccatcaagtttgag
caccagccatggtacattaatgccactgggggaacactccacccataccagctggaaggc
ctgaattggttgagattctcctgggcacagggcacagacaccatcctggctgatgagatg
ggtctcggaaagactgtgcagacaatagtgtttctctactcgctctataaggagggtcac
tctaaggggccgttcttggtgagtgcgcccctctccactatcatcaattgggagagggaa
tttgagatgtgggctccagatttctacgtggtaacatacactggagacaaagacagccgg
gcaatcatcagggagaacgagttcaccttcgaagacagtgcagtaaaatcgggacgcaag
gtgtttcgcatgaagaaagacactcctatcaagttccatgtgctgctgacatcctatgag
ttgatcacaatagatcaagccattctgggctccatcacgtgggcctgcctggtggtagac
gaggctcacagactgaagaacaaccaatcaaagtttttccgaattctcaacgggtataag
atctactacaaactgctgctcactgggactcctcttcagaacaacctggaagagctgttc
cacctgcttaactttctcaccccagagcgcttcaataacctggaaggctttcttgaggag
tttgctgatatctccaaggaggaccagatcaaaaagctccatgacctgcttggccctcat
atgctcagacggctgaaagctgatgtcttcaagaacatgcctgcaaagacagagttgatt
gtcagagtggagctgagccccatgcagaagaaatattacaagtttattttgacgcgaaat
tttgaggctctgaactccaaaggtggagggaaccaagtgtccctgctcaatattatgatg
gacctgaagaagtgctgcaaccatccttacctgttccctgtggctgctgtggaagctcct
gttttacccaacggttcatatgatggcaacctactagtgaagtcctcaggaaaactgacg
ctgcttcagaaaatgctgaagaaactcaaagatgaaggacacagagttctcattttctct
cagatgacaaagatgttggatctgcttgaggattttctggagtttgagggttataaatat
gaacgtattgatggagggattactggaggcttgaggcaggaggctattgaccgcttcaat
gcacctggcgctcagcagttctgcttcttgctttcaacacgagctggaggtcttggcatc
aaccttgcaagtgcagacactgttatcatctacgactctgactggaatcctcacaatgac
atccaagcttttagcagagcccatcgtataggccaaaataagaaggtgatgatctatcgt
tttgtgacgcggggctcagtggaagagcgaatcactcaggtggcgaagaggaagatgatg
ctgacccacctggtggtgcggcccggtctgggctccaaaaccggttctatgtccaaacaa
gaactggacgatatcctaaagtttggcactgaggagcttttcaaagatgaaatggaggca
gcacgaaccatgggtgacaacaaagatggtgaggagggcaatgtgattcactatgacgat
gatgctatctcaaagctgctggaccgcagccaggatgccactgaagacacagagattcag
aacatgaacgagtacctgagctccttcaaagtggcacagtatgtggtgaaagaagaggat
ggagaggaagaggtggagcgggagattatcaagcaggaggagaatgtggatccagactac
tgggaaaaacttcttcgccaccactatgagcagcagcaggaggatctggcccgcaacctc
ggcaaaggcaagcgcatccgaaagcaggtcaactacaacgatacgacccaggaggaccaa
gaatggcaggatgatctttcagacaatcaatcggagtactctgtggggtccgaggacgag
gatgaagatttcgaggagaggcctgaaggcggacgcagacagtctcgccggcagctgaag
aatgagaaagacaaacctctgccacccttactggcacgagttggtggcagtattgaggtc
ctggggttcaacgcccgccagaggaaagccttcctcaatgccatcatgcgctggggcatg
cctcctcaggatgctttcaactcccattggctggttagagacttgagagggaaaagtgag
cgtgagttcagggcctatgtgtctctgttcatgagacatctatgtgagccaggggcagat
ggtgcagagacctttgctgacggagtcccacgtgagggactgtctcggcagcatgttctt
accaggatcggagtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcatgtaaat
ggaaagttgagttccccagatctgattcccatcggcatcgagctgaaaaagctgactgag
agtttatcttctgatcctaacacccctgtgccagccagccctgtcgctacacagcctggc
actcccatcccaccagagaagtctgagtctcttttgggtactgctgaggataaggagacc
acagagcaagatagcaagaaactgtcggagcaggaaactggcagtgccgagccagcatct
gtacctgagaaggcagctgacagtgaagagagcaaggccagctcagaggagaaaacagga
gatgagagggacagaaccgagtcaccctccgcaaagacagagccatctgccaacccaaaa
gagtccgctttgaaacagacagagctgtcatccagtcaaacctcacctaaaagggaccac
tgcaaagacacagagaaggcctcagaaaaaggagatactgattcctctctggcaaagact
gaagacaaggaaaataagccagctgttgcagatgatgtgaagagtgaagatgcattagag
ggccgattgaatggagacaaagacacgctggatgagatggatgaaagcaggaaggaggac
aaaaatggattcaaagccaagttcatgtttaatattgctgatggaggttttacagagttg
cacaccctctggcaaactgaagagcgagcggcgctgtcttctggaaagatgcatgacatc
tggcaccgtcgccatgactactggctgttggctggcatcgtaacacatggctatgctcgc
tggcaagacattcagaatgacccacgttatgctattctgaatgagcccttcaagactgag
atacataagggcaactaccttgagatgaagaacaagttcctggctcgccgatttaagttg
ttggagcaggctctggtgattgaggagcagctgaggcgggcagcttacctgaatatgacc
caggaccccagtcacccggccatggctctcaacactcgcttcacagaggtggaatgtctg
gcagagtcccaccagcacctgtccaaagagtctctggccgggaacaagcctgccaatgcc
gtgctgcacaaagtgttgaaccagctggaggaacttctgagtgacatgaaggcagatgtg
acacgactgcccaacatgctatccaggatcccgccggtgtcggcccgtctgcagatgtct
gagaggagcatcctgagccgcctcaccagccgagggagtgagcctccaccacagcagcct
tttagccagggggggtttggctgctcccagatgtacagcagcagctttggtggaggattc
agaggagcaggtggacagcccatggtcaactacagccagatgcctctgggaccctatgtc
agtgtgtcttctaatggccccccaccccctacaagccatctggacaagaagtcccttgac
tcctttagagacacggctacgcctgacctcaagtcaggcaaacccagtgatgtcatctgt
attgaggactag
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integrated database retrieval system
