Micropterus salmoides (largemouth bass): 119886890
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Entry
119886890 CDS
T07309
Symbol
zgc:113307
Name
(RefSeq) lumican isoform X1
KO
K08121
fibromodulin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119886890 (zgc:113307)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msam00535
]
119886890 (zgc:113307)
Proteoglycans [BR:
msam00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
119886890 (zgc:113307)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
119886890
NCBI-ProteinID:
XP_038553790
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MAFLCCTVLVLLCFFDSASATFIADMDYGGVPLWINRLLGEPSVLSLQGRMDSAWFRANN
HQACPQQCDCPIQWPTALYCDHRGLADIPDRLPDRTQYLFLQCNNISYLSFSFLANITGL
RWLILDHNQLQTDTLDQAALQNQTQLCYFFANHNRLSSVPSALPVGLKQLRLAYNQISSI
SRGAFRNMHNLTLLLLQGNRLQTIKEGDLKGLVSLNLLDLNGNLFSSVPRHLPRTVQQLY
LSNNTLSGLDEDSFVGFHNLKYLRLSHCGLQSRGVHPQVFNFSSLVELDLSYNKLTTIPT
VPTTLQYLYLEANEIQGFNVTSFCREVGPLSYSRMKILRLDGNKMSYQQLPPDWVFCLRV
LESIYI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcattcctgtgttgtaccgtgttggtgctgctgtgtttttttgactctgcctcagcc
acttttatagctgacatggactacggaggtgttcctctgtggattaatcgcctgctgggt
gagcccagtgtgctgagcctacaggggcggatggactcagcgtggttccgagccaacaac
caccaagcctgccctcaacagtgtgactgccccatccagtggcccacggcactctactgt
gaccacagaggcctggcagacatccctgaccgcctgccggacagaactcaatacctgttt
ctccagtgcaacaacatctcgtacttatccttctcttttctggccaacattactggtcta
cgctggctcatcttggaccacaaccagctgcagaccgacacactggaccaggccgccctg
cagaaccagacccagctgtgctatttttttgccaaccacaaccgcctcagttcagtcccc
agtgctctaccagttggactcaagcagctgcgactagcctacaaccaaatcagcagcatc
agccgtggagctttcaggaacatgcacaacctgacgctgctgctgctgcagggaaacaga
ctgcaaaccatcaaagaaggagacctcaaaggtcttgtcagtctgaacctgctggacctc
aatgggaatttgttctcatctgtcccgaggcatttaccccgtactgtccagcagctctat
ctgtccaataacaccctctctgggctggatgaggacagttttgtgggatttcacaacctt
aagtaccttcgtctaagtcactgtggtctgcagagccgcggcgtgcacccgcaggtcttc
aacttctccagcttggtggaactggacctgtcttataacaaacttacaaccattcccaca
gtcccaacaaccctgcagtacctctacctggaggccaatgaaatacaagggttcaacgtg
actagtttctgcagagaggtgggacctctgtcctactccaggatgaagatattacgactg
gatggaaacaagatgtcctaccagcagttgccccctgactgggtcttctgtctgcgagtg
cttgaaagtatttacatatga
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