Micropterus salmoides (largemouth bass): 119886956
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Entry
119886956 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-4
KO
K06761
contactin 3/4/5/6
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119886956
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
msam00537
]
119886956
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
Contactins
119886956
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
msam00537
]
Others
119886956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
V-set_CD47
C2-set_3
Ig_4
Pur_ac_phosph_N
Izumo-Ig
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
119886956
NCBI-ProteinID:
XP_038553897
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MKMLLPWELLILLSLKDCLAENTRHGPVFTQEPSDSIFPLSTDDKQVFINCKAKGNPPPH
YRWNVDGRDINTESDPNYSLVEGNLLINNPHVINHGGVYQCIATNTFGTVVSREAKVQFA
FLQNFSRKSRNTVSVREGQAVVLLCGPPPHYGEIKYSWVFNGQIGFLQQDTRRFISQRTG
NLYIAKVEASDAGNYTCVVRNMMTNTTVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLQV
SKGSSVKLECFALGNPVPSISWRRADGNPLPGKIKINHSSGVLEIPYFRPEDAGVYECVV
ENSRGQNVARGQLIFHNAEHLHWVQTLKDAHMAIDANLQWECKAAGKPRPTYKWLKNGQL
LTAEGRTYVEAGRLTISRISLSDSGMYQCVAENEHGAVYASAELKVIASPPDFTRRPVKK
STVIQRGGEVVLECRPHASPKATISWWRGGELLKDSERXDHMKDGTLRITNISKSDGGKY
TCVARNHFGTSSSTGTLMVKDPTKIIVPPLSLDATVGQSLVLPCEVSSDSSLSPIFKWFF
NGKAIDFNRQEHFEMIGGGFAGDLMMRNIQLKHSGKYVCMVHSEVDTVSAAADLIVKGPP
GAPEGLVVTDITDTTVQLSWGSGPDNRSPITMYMVQARTPFSIGWQTVRTVPDSVPGQMM
HATVKDLNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPVNVSGGGGARGELV
IMWEPVPEEQQSGEDFGYVVAFRPIGSSTWIQTVLASPDASRYIYRNDSIAPLSQFEVKV
GVYNSMGEGIFSRVVRVFSAEEEPSDAPSKVWARAVSASEIEVYWEPIPPRSNSAKIIAY
EVLFWEKGSLQSEAERVSVINTTALLSGLKGSAVYLISVRAQNSAGLGPCSPALNITTKK
PPPSQPPGNIEWNLTNSKIFLNWEHVKAMENESEVTGYKVVHRQNWHGRTTVLETNKTSV
ELQIPSGEDYLIEIKALTEGGDGTSSDPICIPKMSSLNSKGYVCPEPMKICCVMFFVCSM
FIL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttgttgccatgggaactgttaatccttctgtcactcaaagactgcctggct
gagaatacacgccatggtcctgtcttcacccaggagcctagtgacagtattttcccactg
agcacggatgataagcaggtgtttattaattgcaaagctaaaggaaaccctcctccacat
tataggtggaatgtggatgggagagatataaacacagagtcggatccaaactacagcctt
gtagaggggaacctgttgatcaataatcctcatgtcatcaatcatggaggagtgtatcag
tgcatcgccaccaacacgtttgggaccgttgtcagcagggaggcaaaggtccagtttgca
tttctgcagaacttcagcaggaagtcaaggaacacagtgtcggtgagggagggtcaagcc
gtggttctgctctgcggccctccaccccattacggagagatcaaatattcatgggttttc
aatggacagattggcttcctgcagcaggacacccgtcgttttatctctcaaaggacgggc
aacttgtacatagccaaagttgaagcctcagatgctgggaactacacgtgtgtggtgaga
aacatgatgaccaacaccactgtgttcagctctccaacccctgtggtggtgcggagggac
gtagtgatgggtgaatacgagccaaaaattgaggttcagtttcctgacacccttcaagtc
tctaaaggatcatcagtgaagttggaatgctttgccttaggaaaccctgtgccttccatc
tcatggagacgagctgatggaaatccactccccggcaagattaaaatcaaccactccagt
ggggttctggaaattccatattttcgcccggaggatgccggtgtgtatgagtgtgtagtc
gaaaacagcagaggacaaaatgttgccagagggcaacttatattccacaatgctgaacat
ctgcattgggtccagacactgaaagatgctcatatggccattgatgctaatctgcagtgg
gaatgtaaagccgccggtaagcctaggcctacatacaaatggttgaagaacggtcagctg
ctaacagcagaggggaggacctatgtggaagcgggaagacttaccatatccaggattagt
ctgtcggactctgggatgtatcagtgtgtagcagagaatgaacatggagctgtctatgcc
agcgctgagcttaaggttatagcttccccacctgacttcacccggcggcccgtgaagaag
tccacagtgatccagagggggggtgaagtggtcttagagtgtcgcccccatgcttccccc
aaggccacaatctcgtggtggagagggggcgaacttctgaaggacagcgagaggtaggac
cacatgaaggatgggactctacgtatcaccaacatctccaaatctgatggaggcaagtac
acatgtgtggccagaaaccattttggaacatccagcagtacggggacgctgatggtgaaa
gatcctaccaagattatagttccacctttgagtttggatgccacagtgggacagagcctt
gtgttgccatgcgaggtgtccagtgattcttccctgagtcccatcttcaagtggtttttc
aatggaaaagctattgatttcaacaggcaggagcactttgagatgattggagggggattt
gcaggtgacctgatgatgaggaacattcagctaaagcattctgggaagtatgtgtgtatg
gtacactctgaagttgacactgtttcagcagcagcagacttaattgtcaaaggacctcct
ggtgccccggagggcctggtggtgactgacattacagacaccactgtgcaactgtcctgg
ggctctggaccagacaaccgcagtcctattaccatgtatatggtgcaggccaggaccccc
ttctctatagggtggcagactgtgagaacagttcctgattctgtgcctggacagatgatg
catgcaacagtgaaagatttgaacccctgggtggattatgaattcagggtggtggcaatc
aacagtgttggtgttggagaaccaagcacaccatcaaaacagattcgaaccaaagcagca
gttcccaaggttgcaccagttaatgtgagtggaggcggaggagctcgaggagaacttgtc
atcatgtgggagccagttccagaagaacagcagagcggagaggactttggctatgttgtg
gctttccgtccaattggcagcagcacctggatccagacagtgctggcttcacctgatgcg
tcgagatatatttacagaaatgacagcattgcacccctgtctcagtttgaagtgaaagtg
ggagtctataacagcatgggagagggaatattcagccgtgtcgtcagagtgttttcagca
gaagaagagccctctgacgcgccatcaaaagtatgggcccgtgctgtgtcagcttctgag
attgaggtgtactgggagccaattccccccaggtccaacagtgcaaagatcattgcatat
gaggttctcttttgggagaaaggatctctgcagagtgaagcagagagagtgagtgttatc
aacaccacagctctgctttctggcttgaagggcagcgcagtctatctgatctcagtcaga
gcccaaaacagtgctggacttggaccctgcagccctgctcttaacatcaccaccaagaaa
ccacctccaagtcagcctccagggaatatcgagtggaacctgaccaactctaagatcttt
ctaaattgggagcatgtcaaggcaatggaaaatgagtctgaggtgacaggatacaaggtt
gtacatcgtcagaactggcatggcaggactactgtattggaaaccaataagaccagtgtg
gagctgcagattccctctggagaggactaccttattgagataaaagcactgactgaaggg
ggcgatggcaccagcagtgaccccatctgcataccaaagatgtccagtcttaactcaaaa
ggatatgtgtgtccagaaccaatgaagatttgctgtgttatgttttttgtatgttctatg
ttcattttgtag
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integrated database retrieval system
