Micropterus salmoides (largemouth bass): 119887354
Help
Entry
119887354 CDS
T07309
Name
(RefSeq) extracellular matrix protein FRAS1-like
KO
K23379
extracelluar matrix protein FRAS1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04512
ECM-receptor interaction
msam04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119887354
04518 Integrin signaling
119887354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Cadherin_3
Cadherin_4
Big_9
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
119887354
NCBI-ProteinID:
XP_038554099
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
VAQTFYITIKPVDDSLPLLQVPGMRVQEGVRKTITEFELKATDADTEAESIVFTVVQAPR
HGTIERTGNGQHYRQTSSFTMDDIYQNRISYNHDGSNSLKDRFTFTVADGTNLLFMVEEG
SKEIVTAAPQKFKIDILPVDDGTPRIVSNLGLQWLEYMENKATNLITKKELLTMDPDTDD
GQLVYEITTEPKHGFLESKLKPGNPITTFTQADVNLGLIRYVLHQKNVQETMDNFKFLVK
DSKPNVVSDNVFHIQWSLISFEHKSYNVSEKAGTVAVTVKRTGNLNQYAIVLCRTEQGSG
TSTSSVGSRPGQQDYVEYAGQVQFDEREDTKVCTIVINDDKVFEGTESFHVELSMPVYAL
LGGNTRAIVNINDTEDEPTLQFDKKTYHVNESTGFIHVPIERKGDTSSTVSALCYTVGKS
AQGSSLHALESGSDYKSRGMTNDNRVIFGPGISMSTCDVKLIDDSEYELSEEFELVLSDA
SDNARMGDVTLAKVVIDGPNDASTVSLGNATFTFSEDAGTIEIPVLRHGSDLSSVTSVWC
ATRPSDPPSASPGVDYIPSSKKVEFKPGKTEETCSLTIMDDIQNPSIEGSESFVVFLSSP
QGAVLQEPYEANVVITDTFQDIPSMQFEKSAYIVKEKDSVLHIPIIRTGDLSFKSSVRCF
TRTMSAMVMDDFEERKNADESRITFLKGEKVKNCTVHINDDSVFEPEEEFQVHLGTPLGD
HWSGAMVGASDIVTITITNDEDAPTIEFEQASYQVREPPGPDGIEVLDIKVIRRGDLDRT
SKIRCSTRDGSAQSGVDYNPKSRVLKFTPGMDHFLFKVEILSNEDREWHESFSLVLGPDD
PVEAVLGEITMATVTILDQEASGSLILPATPIVVSLADYDHVQEVTKEGSKKTPSPGYPL
VCVTPCDPHYPKYSVMKERCEEAGINQTQVHFSWEVAAPTDTSGARSPFETVTDTTPYTS
VNHMVLDSIYFSRRFHVRCVAQARDKAGHLGTPLRSNIATIGTEGSICHTPVTTGTARGF
QAQSFIATLKYLDVKHKEHPNRIHISVQIPHQDGMLPLVSTMPLYNLHFLLSESIYRQQH
VCSNLVTLKDLQGLSETGFLDDVSYDSISLGPGYDRPYQFNPNVREAKSIQLYKHLNLKS
CIWTFDAYYDMTELIDVCGGSVTADFQVRDSAQSFLTVQVPLYVSYIYVTAPRGWASLEH
HTEMEFSFFYDTVLWRTGIQTDSVLSARLQIIRIYIREDGRLVIEFKTHAKFRGQFVLEH
HTLPGHKSHLMAPDHLGGIEFDIQLLWSAQTFDSPYQLWRATSSYSRKDYSGEYTVFLIP
CTVQPTQPWIDPGDKPLSCTAHAPEKFLVPIAFQQTNRPVPVVYSLNTEFQLCNNEKVFM
MDPATADVSMAEMDYKGAFSMGQTLYGRVLWNPEQNLNAAYKLQLEKVYLCTGRDGYVPF
FDPTGTLYNEGPQYGCIQPNKHLKHRFLLLDRKQPDVCDKFFHDVPFEAHLASDIPELQS
MTAMPGVDGFTMKVDALYKVEAGHQWYLQVIYVISPESRSSPRIQRSLTYELSRSKRDLV
DRSGRLTLDESLIYDNEGDQVKNGTNMKSLYLEAGPTATFNAHMGSTVGGGVAAVTLLVL
VLLASCFLFRRCRQSGKKKSKKAQKVYEEYPLNTKVEVCMDKCVEKNFSSKHCTVRNINI
LNRNQEPNGKAKVKQVNLEVKLHNNLNDGTEV
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
gttgcccagacgttctacattaccatcaagccagtggacgactccctgcctctgctccag
gttcctggtatgagggtccaggaaggagtgaggaagaccatcaccgaatttgagctgaaa
gccacagatgcagacactgaagcggagtccattgtcttcactgtcgtccaggctccacgt
cacggcaccatagagcgcacgggcaatggccaacattaccggcagaccagcagtttcacc
atggatgacatctaccagaaccgcatcagctacaaccacgacggctccaactcgctcaaa
gaccgcttcaccttcactgtggctgatggcaccaacctgctgttcatggtggaagagggc
agcaaggagatagtgacggctgcaccacagaagttcaagatcgatattctgccagttgac
gatggcactccgcgtatcgtcagcaacctgggactgcagtggctggagtacatggaaaac
aaggctaccaacctgatcaccaagaaggagctgctgactatggatccagacacagatgat
ggacagttggtttacgaaatcaccacagagccaaagcacggcttcctggagagtaagctg
aaacctggaaaccccatcaccaccttcacacaagctgatgtaaacttgggtctgatccgc
tacgtgctgcatcagaagaacgttcaggaaaccatggacaacttcaagttcctggtcaaa
gacagcaaaccaaacgtggtcagcgacaacgtcttccacatccagtggtcactcatcagc
tttgagcacaaaagctacaatgtgagtgagaaggccggcacggtggctgtgacggtgaaa
cgaacaggtaacctcaaccagtacgccatcgttctctgccgcaccgagcagggcagcggc
acctccaccagcagcgtcggatctcgtccgggccagcaggactatgtggaatatgctgga
caggtacagtttgatgagcgtgaggacaccaaagtgtgcaccatagtgattaacgatgac
aaggtgtttgagggaactgaaagcttccacgtggagctgagcatgcctgtgtatgcgctg
ctgggcggaaacacgcgtgccatcgtcaacatcaacgacacagaggacgaaccaactctg
cagtttgataaaaagacctaccacgtcaacgagagcactggcttcatccacgtacccatc
gagagaaaaggtgacacctccagcaccgtgtctgctctctgctacaccgtgggcaagtca
gctcagggcagcagcctccacgctctggagtccggctccgactacaagagccgcggcatg
accaatgacaaccgcgtcatctttggccccggcatcagcatgtccacctgtgacgttaag
ctcatcgacgacagcgagtatgagctgtctgaggagtttgagctggtgctttcagacgcc
tcggataatgcccgtatgggggacgtgacgctggccaaggtcgtcatcgatggacccaac
gatgcttcgacggtttctcttgggaacgccacctttactttcagtgaagatgctggcaca
attgaaataccagtgctgcgccatggcagtgacctgtcctctgtgacttctgtatggtgt
gccacccgaccttcagatcccccctcagccagcccgggggtcgactacatccccagctcc
aagaaggtggagttcaaacctggaaaaactgaggagacctgcagtttgaccataatggac
gacatccagaacccgtccatcgaaggatctgagtcttttgtggtattcctcagttccccg
caaggtgctgtcctccaagagccctatgaagccaacgttgtcatcactgacaccttccag
gacattcccagcatgcagtttgagaagagtgcctacattgtgaaggagaaagacagtgtc
ctgcacatccccatcatccgtacaggtgacctgtccttcaagtcatcagtgcggtgtttc
actcggaccatgtcggccatggtgatggacgactttgaggagaggaagaatgctgatgag
tcacgcatcactttcctcaaaggagagaaggtaaaaaactgcaccgttcacatcaatgat
gactctgtttttgagcccgaagaggagttccaggtgcatcttgggacaccacttggtgac
cactggagtggcgccatggtgggcgctagtgacattgtcactatcactatcaccaacgat
gaagatgctcccaccattgagtttgagcaggcgtcctaccaggtgagagagccacctggt
ccagatggcattgaggtgcttgacataaaggtgatccgtcggggggatctggaccggacc
tccaagatccgctgcagcacccgggacggatcggcccagtctggagtggactacaatccc
aagagccgagtgcttaaattcacccctgggatggaccatttcctgttcaaggtggagatt
ctgtccaatgaggacagggagtggcacgagtccttctcattggtcctcggacctgatgac
cctgtggaggcggtactcggggagatcactatggccacagtgaccattctggaccaggag
gcttcaggcagcctcatcctccctgccacgcctattgtggtgtctctcgccgactatgat
catgtccaggaggtgacaaaggaaggcagtaagaagacgccctctccaggttaccctctg
gtgtgtgtcaccccctgtgaccctcactaccccaagtactctgtgatgaaggagcgctgt
gaggaggcaggcatcaaccagacccaagttcacttctcctgggaagtggcggcacccacc
gacaccagcggcgctcggtccccctttgagacagtcacagacaccacgccgtataccagc
gtcaaccacatggtcctggacagtatttatttcagccgtcgcttccacgttcgctgcgtt
gctcaggccagggataaggctggtcaccttggaacgccgctgagaagcaacatcgccacc
atcggcacagagggctccatctgccacacgccggttaccacgggaaccgccagaggcttc
caggctcagtccttcatcgccacactcaaatacctggacgtcaagcacaaggaacacccc
aaccgtatccatatttcagtgcagatcccccatcaggacggcatgctccccctggtgtcc
accatgccgctgtacaacctgcatttcctcctgtcagagtccatctataggcagcaacac
gtctgctccaaccttgttaccctcaaagacctacagggtctttccgagacaggtttcctg
gacgatgtatcctacgacagcatctctctggggccgggttatgaccgcccctatcagttc
aacccaaacgtccgcgaggccaagagcatccagctctacaagcacctcaacctcaagagc
tgcatctggacctttgatgcttactacgacatgaccgagctcatcgacgtctgcgggggc
tcagtcaccgctgatttccaggttcgggactctgcccagtccttcctgacggtgcaggta
cctctctatgtgtcgtacatctacgtgacggcaccgagaggctgggcctctctggagcat
cacaccgagatggagttctctttcttctacgacaccgtactctggaggacaggtatccag
actgacagcgtcctctcagccagactgcagatcatcaggatctacatcagagaagacgga
cgactggtgattgagttcaaaactcatgcaaaattcagaggtcagtttgtccttgaacac
cacactctgccgggccacaagtcccacctgatggcgcccgaccacctcggaggcatcgag
tttgacatacagctgctgtggagcgctcaaacctttgactcaccataccagctgtggaga
gccaccagctcctacagcaggaaggactattctggggagtacacagtcttcttgatcccc
tgcactgtccagcccactcagccctggatcgaccccggtgacaaacctctgtcctgcacg
gctcacgctccagagaagtttctggtgccgatcgccttccagcagaccaaccggcctgtt
cctgtggtttactccctcaacacggagttccagttgtgtaacaatgagaaggtgttcatg
atggacccggctaccgctgatgtgtctatggctgagatggactacaagggagcattctcc
atgggtcaaactctgtatggcagagtattgtggaaccctgagcagaacctgaacgcagcc
tacaaactgcagctggagaaggtttacctctgcactggcagggacggatatgttcccttc
tttgaccccacaggaacgctgtacaacgaggggccacagtacggctgcatccagcccaac
aagcacctgaagcatcgcttcctactgctggatcgtaaacagccagacgtttgtgacaaa
tttttccatgatgttcccttcgaggctcacttagcgtcagatatcccagagctgcagtcc
atgacagccatgccgggcgtcgacggctttacaatgaaggttgatgctctctacaaggtg
gaggcggggcaccagtggtacctgcaggtgatttatgtgatcagcccggagtcgcggtcc
agccccaggattcagcgctcgttgacctatgagctgagccgctccaagcgcgacctggtt
gatcgcagcgggcgtctgacgctggacgagtcgctgatctacgacaatgagggcgaccag
gtgaagaacggcaccaacatgaagtcgctctacctggaggccgggcccacagcaaccttc
aacgcccacatgggcagcacggtgggcgggggagtggcagccgtcaccctgctggtcctg
gtcctgctggcctcctgcttcctgttccgccgctgccgacagtcgggcaagaagaagagc
aagaaagctcagaaagtgtacgaggagtatccgctcaacaccaaggtggaagtgtgcatg
gacaagtgtgtggagaagaacttcagcagcaaacactgcacagtgaggaacatcaacatc
ctcaaccgcaaccaggagcccaacggcaaggccaaggtcaaacaggtcaacctggaggtc
aaactccacaacaacctcaacgatggcactgaggtctga
DBGET
integrated database retrieval system
