Micropterus salmoides (largemouth bass): 119887533
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Entry
119887533 CDS
T07309
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119887533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119887533
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119887533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
119887533
NCBI-ProteinID:
XP_038554230
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKNLGSGSRKLESVVLSKLNFEAFVKDLLLVRQYRVEVYKNHSKSSKEHDWKIEYKA
SPGNLTQFEEILFGGGTGAEGCAGVVAVRFSTGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEANTDGNKLREVVQRGGILVSDKKRAEFSCKDVVQDL
NRLLRVKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLELGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFLRHTATLQDCYRVYQAVSHIPALVTAL
EKYSGSYEVLLEAVFLSPLRDLQNDFAKYQEMIETTLDMNQIDHHEFLVKASFDPALSEL
REKMDTLENSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTKNREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ
LDGVASFAVASVSAPVPYVRPRLLADGCRRMELQQARHPCMETDADTAFIPNNITFVQGE
KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSILARVGAGDSQVKG
VSTFMSEMLETAAVLRSATGNSLIIIDELGRGTSTYDGFGLAWAISEHIASNIGCFCLFA
THFHELTALAAQQPSVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPGGEKSEQEEEPEAKRRRTDKQVGENLIKDFLEKAKSLSVATMSE
EEVKAELRRMKQELIVKNNTYITEILARCVPAKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacagaacctgtctatggacagtgcagccgagcatggctttcta
aacttcattttttctatgccggagaaaccggacactactttcagaatatttgaccgtaac
gactactacactgttcacggaaaagacgccatattcgcagcgaaggaagttttcaagacg
aatggggtcatcaaaaatctgggctcggggagccgcaagctggagagtgtggtcctgagc
aagctgaactttgaggcctttgtgaaagacctgctgctggtgaggcagtacagagtagaa
gtgtacaagaaccacagcaagagcagcaaggaacacgactggaagatcgagtacaaggcg
tctccaggaaacttgactcagtttgaggagattctgtttggtggtggaaccggagcggag
ggttgtgcaggagttgttgctgttcggttttctacaggagctgacggacaacgtgtggtc
ggggtcggctatgtggacgcagcccagaggacgatgggagtgtgcgagtttccagacaac
gagattttctccaatctggagtccctgcttgtccaaatcagcccaaaagagtgtctttta
gcccagggtgaagccaacacagacggcaacaaactacgggaggtggtacagcgtggcggc
atactggtctctgacaagaagagagcggagtttagttgcaaggatgtggtgcaggatctc
aacaggctgctgagggtgaaaagaggagagactgtggcgagcaacacactgcctgagctg
gacaaacaggtggcgatgtcgtgcctggctgcagtggtgcgtttccttgaactgctgtct
gatgagtctaacttcaactccttcagtctgaccactctggagctgggtcagtacatgagg
ctggacaatgctgcagtgagggctcttaacctcttccagggatcgcctgacgacaccagt
ggagctcattcattggccggtctgttgaacaagtgccgtacgccgcagggtcagcggctg
gtcaaccaatggatcaaacaaccactcatggacaaaaccaaaatagaggagaggctggac
ctggtggagagttttgtgtgcgactctgagctcaggcagacctgtcaggaggacttgctg
cggcggtttcctgatcttcaccgtctggccaagaagttcctccgtcacactgcgacactg
caagactgctaccgcgtctaccaggctgtgagccacatccctgccctcgtcacagccctg
gagaaatactcgggtagctacgaggttctgttggaggcggtgttcctgtctcctctcaga
gacctgcagaatgactttgcgaagtaccaggagatgattgaaaccactctggacatgaac
cagattgaccaccacgagttcctggtgaaggcgtcttttgatccagcattgagtgaactg
agagaaaagatggatacgctggaaaatagcatgcaggcagtcctgaacagcgcagccagg
gaactaggtctggatgctggtaagacggtgaagctggagtcaaacgccatgctcggcttt
tacctgagagtcacctgcaaggaggagaagagtctgaggaacaacaagaaattcaccacc
ctggatgttcagaagaacggagtgcgcttcacaaacagtaaactgagctctctaaatgag
gagtacaccaagaacagggaggagtatgaggaggcccagaatgccatcgtgaaagagatc
atcaacattgcttcaggttacgtggatcccctccagacgctgagcgacgtgatagcacag
ctggacggtgtggcgagttttgccgtggcgtcagtctctgctcccgtgccgtatgttcgg
ccccgtctgttggcggacggctgcaggcgtatggagctgcagcaggccagacatccctgc
atggagacggacgcagacaccgccttcatacccaacaacatcaccttcgtccagggagag
aagagcttctatattataacaggaccaaatatgggcggcaagtcaacatttatccggcag
gtaggtgtgattgcgctgatggctcagatcggctgctttgtgccatgcgagaaggcggag
cttagcgtgatcgacagcatcctggccagggtgggagcgggagacagccaggtgaaagga
gtatctaccttcatgtcagagatgctggagacggctgccgttctgcgctcggccacggga
aactccctcatcataatcgacgagcttggcagaggcacgtccacatacgatggcttcggt
ctggcctgggccatcagcgagcacattgcctccaacatcggctgcttctgtctgtttgcc
actcacttccatgagctgacggcgctggcagcacagcagccctctgtccacaacctgcac
gtcacagccctgacctcccacaacacactcaccatgctgtacagagtcaaaccaggtgtg
tgtgaccagagttttgggatccacgttgccgagttggcttgcttcccaccatctgtggtt
gccatggcgaaggagaaggcggaggagctggaggagttccaggaacctggaggggagaag
tcagagcaggaggaggaacctgaggccaagagacggcggacagacaaacaagtgggggag
aacctgatcaaggacttcctggagaaggctaagtcactttctgttgccaccatgagtgag
gaagaggtgaaagcggagctccggagaatgaagcaggagcttattgtcaaaaataacaca
tacatcacggagatccttgcacgctgtgttcctgcaaaaacggcttga
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