Micropterus salmoides (largemouth bass): 119887893
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Entry
119887893 CDS
T07309
Symbol
cacna1aa
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119887893 (cacna1aa)
04020 Calcium signaling pathway
119887893 (cacna1aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119887893 (cacna1aa)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119887893 (cacna1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
119887893
NCBI-ProteinID:
XP_038554374
LinkDB
All DBs
Position
Unknown
AA seq
2403 aa
AA seq
DB search
MILATIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFHKN
SYLRNGWNVMDFVVVLTGILSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGLLLFFAILMFAIIGLEFYMGKFHTTCFDNHTGEIKADYPCGTEPSSRGCPVG
SMCRKYWLGPNYGITQFDNILFAILTVFQCITMEGWTELLYHSNDASGSAWNWMYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVIL
ADDDNENEYDGSRRRATKNHKNKAELLNPEEGEGDLAVGSPFARASLKSSKLEGSTFKRR
ERRLRFLIRHIVKSQAFYWTVLCLVGLNTMCVAVVHYDQPEALSDFLYFAEFTFLGIFLT
EMFVKMYGLGKQAYLNSSFNCFDCIVICGSIFEVLWSIIQPGTSFGISVLRALRLLRIFK
VTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFETGTPPTNFD
TFPAAIMTVFQILTGEDWNMVMYDGIQSQGGVNKGMAFSVFFIVLTLFGNYTLLNVFLAI
AVDNLANAQELTKDEQEEEEAASQKIALQKAKEVAEVSPLSAANLSIAAFGPLPQHFISN
KVHSECHNATDPFLDCKEQQKNNNKGINKSVWEQRTKELRRQTLVSSREALYNELDADER
WKARTGNGEQNNVNYSRQIRPDMKTHLDRPLVVDPHENRNNNTNKTTANNSDLCFSQHHP
ADELHRQTLLHEQGGQVGGGGGGGSGPIRPPMERGESTESRRSRKSEHHHHASHIRLDAT
VIPGPGGEERPPRRHHHTRSGSRGGGQSEHRKPRSHRKSAEDGEDGRGGAGKTGRHKSKG
LDGGEGGEQEGGGDGSERRPRRNRHGTEGEGKRMCQHRRKECSVPNLSTTRPIQKSLSRQ
DSQYSEDMDNLMNTKLVSGSTPPSDGGDQVTNHTVASGFGSALHLANSGTHGSLVTLDSY
GSIAHHRANSVIRLPHHDYTTVDMPIFPSTNAILQVNKNANTEPLPAKENKDDDDDEKGG
EGGPRPMPPYSSMFILSTTNPFRRACHYICTLRYFEMCILLVIAMSSIALAAEDPVWPES
PRNNVLRYFDYVFTGVFTFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFT
GSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYLLFMFIF
AVVAVQLFKGRFFYCTDESKEFERDCRGEYLVYERDNEVKAQKREWKKYDFHYDNVAWAL
LTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALI
IITFQEQGDKMMEDYSLEKNERACIDFAINARPLTRHMPQNKLSFQYRMWEFVVSPPFEY
TIMAMIALNTVVLMMKYDEASDTYEAVLANLNIVFTSLFSMECVLKIIAFGALNYFKDAW
NIFDCVTVLGSITDILVTELGMDNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSF
KALPYVCLLIAMLFFIYAIIGMQLFGNIALDEESDSAINQHNNFQTFVQALMLLFRSATG
EAWHDIMLACLGGKVCDPLSGNPDPECGSQFAYLYFVSFIFFCSFLMLNLFVAVIMDNFE
YLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVAC
KRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGTEGGIDKHQMDAELRKEMMAIWP
NLSQKTLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKIKRSQALRDEQRVEPPSPTQD
GGPGLNNALPPPETTETVNNLPVEGGVPESHSWVTARAQEMSQKAGSWSPEGHPEDGLGS
MTNSQTVEMREMGQDGYSDTEHFPPMEGHGRAASMPRLPGDNQTISDSSPMKRSASSLGH
SRSGRGHRDKGGADDYNMERVIPEEGRTSRHGHRRKDRSHRASERSLCRYAEADTGLGTD
LSTTTQSGDLTSKDKDRDRDRGRSKDRKHHHHHHHHHGSVDKERYVAERGGEYGHRHSRD
REHDRERERERDRRWSRSPSEGRECMTHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTP
ATPRPHVTYSPVVRKAMPTPPGGPQGRPPAPAPRRFSPEPPQGQGPPPRCTPTSPSWHIP
PGSSSPTSLGRHRWRXGGSVEGDSCFYNQDYQDYEPHHEPPAYEQSSMQGGNPHPHNLAN
HPLPPPPQPQPHNPHPLPPPQPHPVNNPHPHPPSHPQPSRTSPRTVHHAPPPTTALTGPV
QGQMQPAAQRRLPNGYRSSSPSTHLHGPPHTGPHKVPPPAGHPRGPRKGLHEPYSETEDD
DWC
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgattctagctaccatcattgccaactgcatcgtcctggctctggagcaacatttgcct
gatggggacaagactccgctgtctgagcgcctggatgatacagagccgtacttcataggg
atcttctgctttgagtctggaataaagatcctggcacttggttttgccttccacaagaac
tcctacctgaggaatgggtggaatgtcatggactttgtggtggtgctcacagggattctg
tccactgtgggttcagatttcgacttgcggaccctcagggctgtgcgagtattgaggccc
ctcaaactggtgtctggtattcccagcttacaggtggtgctcaaatccatcatgaaggcc
atgattcctctgctgcaaattggcctgcttcttttctttgccatcctcatgttcgccatc
attggtctggagttctacatgggcaaattccacacaacctgctttgacaatcacacaggt
gagattaaagcagattatccatgtgggactgaaccttcgtcacgggggtgtccagttggc
agcatgtgtagaaagtactggcttggaccaaactatggcatcacccagtttgacaacatc
ctgtttgctatcctcaccgtcttccagtgtatcaccatggagggatggactgagcttctc
taccatagcaacgatgcctcagggagtgcatggaactggatgtacttcatccccctcatc
atcatcggctccttcttcatgctcaacctggtgctgggtgtgttgtccggggagtttgcc
aaagagagagagcgtgtggagaacaggagcgagttcctgaagctcaggagacagcagcag
attgaaagggaactcaatggttatctggaatggatttgcaaagctgaagaggtcatcttg
gcagatgatgacaatgaaaatgaatatgatggctcccgtaggagagccacaaagaaccat
aaaaacaaagctgagcttctaaacccagaggaaggggagggagatctggcagtagggtca
ccatttgcccgtgccagcttgaagagctccaagctcgaaggatcaactttcaagcggcgt
gagcgacggctacgcttcttaatccgacacattgttaagtcccaggccttctactggacc
gtgctgtgtttggtgggcctcaacacaatgtgtgtggcagtagtgcattacgaccagcca
gaagcactttcagattttttatattttgctgaattcaccttcctggggatattcttgacg
gagatgtttgtaaagatgtatggcctgggcaagcaggcctacctcaactcctccttcaac
tgctttgactgcattgtgatatgtggtagcatatttgaagtgctgtggtccatcatccag
ccggggacatcgtttggcattagtgtgttacgagctctcaggttattgagaatcttcaaa
gtcaccaagtactgggcatctttgcgtaaccttgttgtctctctgctcaactccatgaag
tccatcatcagcttgctcttcctgctcttcctcttcatagttgtctttgctctgctgggc
atgcagctcttcggaggacagtttaattttgaaactggcactcctccgaccaactttgat
actttccctgcagcaataatgacagtgttccagatcctgaccggtgaggactggaacatg
gtgatgtacgatggcatccaatctcagggcggagtcaacaagggcatggccttctctgtc
ttcttcatcgtgctcacgcttttcggcaactacactctgctgaatgtgttcttggctatc
gctgtagacaatttggccaatgcacaggaactgaccaaggatgaacaagaggaagaggag
gccgccagtcagaagatcgccctgcagaaagccaaggaggtggctgaagtcagcccgcta
tctgctgccaacctctccattgcagcgtttggacccttaccacagcacttcatcagcaac
aaagtacacagtgagtgtcacaacgctaccgacccctttctggactgtaaggagcagcag
aagaacaacaataagggaatcaataagtcagtgtgggaacaacgcaccaaggagctgagg
aggcagactctggtgtccagtcgcgaggccctctataacgagctggacgctgacgagcgc
tggaaggcaaggacaggcaatggggagcaaaacaatgtgaactattcacgtcaaatccgt
ccagacatgaagacccacctggatcgacccttggtggttgacccccatgagaaccgcaac
aacaacaccaacaagaccactgcaaacaattcggacctctgcttcagccagcaccatcct
gctgatgagctccacagacaaacactcctccacgaacagggtggccaagttggagggggt
ggtggaggaggctcaggtccaatcaggcctcccatggagcggggcgagtccacagagagc
aggcgcagccgcaaaagtgagcaccaccaccacgcctctcatatccgattggacgctaca
gtgattcctggaccaggcggagaggagaggccgcccaggcgccatcaccacacccggagc
ggcagccgagggggggggcagtcagaacaccggaagcccaggtcacaccgaaaaagcgca
gaagatggtgaggatggcaggggaggggctggaaaaacagggagacataaaagcaaagga
cttgacggtggagaaggaggagagcaggagggaggtggcgatggcagtgagaggaggcca
agaagaaatcggcatggcacggagggcgaggggaagaggatgtgccagcacagaaggaag
gaatgcagtgtccctaacctctctaccacccggcctattcaaaagagcctctccaggcaa
gacagccagtacagtgaggacatggacaacctcatgaataccaaactggtctctggctct
accccaccaagcgatggtggtgatcaagttaccaaccacactgtggcctctggctttgga
tctgccctccatcttgctaacagtggcactcatgggagtttggtcacattagatagctat
gggagcattgcacaccaccgtgccaacagtgtcatcaggctgccccaccatgactacaca
actgttgacatgccaatttttccatccaccaatgccatactgcaggttaataagaatgcc
aacacagagccactgccagcgaaggagaataaggatgatgatgatgacgagaagggaggt
gaaggaggacccaggcccatgcctccctacagctccatgttcatcctgtctaccaccaac
ccgtttcggcgggcgtgtcactacatctgcaccttgcgttattttgagatgtgtatcctg
ctggtcattgccatgagcagtatcgccttggctgctgaagaccctgtctggcccgagtcc
cctcgcaacaatgttctacgttatttcgactatgtcttcacaggagtgttcacatttgag
atgctgataaagatggtggatctaggattggtcttgcaccagggctcttatttccgggac
ttatggaacatccttgactttatagtggttagtggtgctctggtggccttcgccttcaca
gggagcagtaagggaaaagacatcagcactatcaagtctctgcgggtactgagagtgtta
agacctctgaagaccattaaacgtcttcccaaactcaaggctgtgtttgactgtgtggtg
aactctctgaagaatgtgctcaacatcctgattgtgtacttactgttcatgttcatcttt
gctgtggtggccgtgcagctcttcaagggacgcttcttttactgcactgatgaatcaaaa
gagtttgagcgcgactgcaggggcgagtatctggtgtatgaacgtgataacgaagtgaag
gcgcagaagcgggagtggaagaagtacgatttccactacgacaacgtggcttgggcccta
ctcaccctcttcaccgtgtctaccggagaggggtggccgcaggtgctgaagcattcagtg
gatgcgacttatgagaaccagggcccgagcccggggtaccggatggagatgtccattttt
tacgtggtgtacttcgtggtcttccccttcttcttcgtcaacatcttcgtggctctcatc
atcatcaccttccaggagcaaggagacaagatgatggaggattacagtttagaaaagaat
gagagagcttgtatagactttgccatcaacgccaggcccctgacacgccacatgcctcag
aacaagctgagtttccagtaccgaatgtgggagtttgtggtgtcgccgccatttgagtat
actatcatggcaatgatcgcgctcaacacagttgtgctgatgatgaagtatgacgaagct
tctgacacctatgaagctgtgttagccaacctgaacatagtgtttacctccctcttctcc
atggagtgtgtactcaagatcatcgcctttggagcactgaattatttcaaagatgcctgg
aatatttttgactgtgtgacagtcctgggcagcattactgacatcttagttaccgagctt
gggatggataatttcatcaacctaagtttcctgaggctgttcagggcagctcgtctcatc
aagctgctgagacagggagaaaccattcgcatcttgctctggaccttcgttcagtcgttt
aaggcactaccttatgtctgcctcctcattgccatgctgttcttcatttacgccatcatt
gggatgcagctttttgggaatattgctctggacgaagaatcagacagtgccatcaaccag
cacaacaacttccagactttcgtacaggctctcatgcttctcttcaggagtgccacggga
gaggcatggcacgatatcatgctggcctgtctggggggtaaggtgtgtgaccccttgtca
gggaatccagacccagagtgtggcagccagtttgcctacctctactttgtctccttcatc
ttcttctgttcattcttgatgctgaatctgtttgttgccgtcattatggacaactttgag
tacctgactagagattcatccatactgggacctcaccacctggatgagtatgtcaggata
tgggcggagtatgatcctgctgcctgcgggcgcattcattataaggacatgtacagttta
ttacgagttatcgacccccctctcggcttaggcaagaaatgcccccatagggtggcctgc
aagagactgctccgtatggatctgcctgtggccgacgacaacacggtccacttcaactcc
actctcatggcgttgatccgcaccgcgctggacatcaagattgccaagggtacggaaggt
ggcattgacaagcaccagatggatgcagagctgaggaaagagatgatggcgatctggccc
aacctctcccagaaaactctggatttgctggttacgccacacaagtcagcgacagacctg
acagtggggaaaatctacgctgctatgatgatcatggagtactaccggcagagcaagatc
aagcgctcacaggctcttcgggatgagcagcgcgtggagccaccttcccccacccaggat
gggggtccgggacttaacaacgcactccctccacctgagacaacagagactgtcaacaac
ctgccagtggaggggggggtcccggagagccattcatgggtgacagctcgtgctcaggag
atgtcccagaaggccggcagctggagccctgagggtcaccctgaggatggcctgggaagc
atgaccaactctcagacggtagagatgagagagatggggcaggatggttactcggatact
gagcactttccaccaatggaaggccatggcagggccgcttccatgccccgcctcccaggc
gacaaccaaaccatcagtgacagcagtcccatgaaacgctcggcctcgtcgctgggccac
agcaggtccgggcgtgggcacagagacaagggaggggcagacgactacaatatggagcgt
gtaataccagaggaagggagaacttccagacatggacaccggcgaaaagaccggagtcac
cgggcgtctgagaggtccctctgtcgctacgccgaggctgacacaggcctgggcacagac
ttgagcacaaccacccagtccggagacctcacatccaaagacaaggatcgtgaccgagat
cgcggccggtccaaagaccgtaagcaccaccaccatcatcaccaccaccacggctctgtg
gacaaggagcgctacgtagcagagcgagggggcgagtacgggcacaggcactcccgtgac
agagagcatgaccgggagagggagcgggaaagggaccggcgctggtcacgatcgcccagc
gagggtcgcgagtgcatgacacacagacagggcagtagttcggtcagcggaagtcctgtc
ccctcaacatcggggaccagtacgccacgtcgaggccgtcgtcagttgcctcagaccccc
gcaacacctcgaccccatgttacctactcccctgtggttcgtaaggctatgcccacacca
ccgggggggccacagggccgaccaccagccccagccccccgtcgcttttctcctgagcct
ccccaaggccagggccctcccccccgttgtactcccaccagcccatcatggcacatcccg
ccagggtcatcatcccccacctcgctggggagacacaggtggaggnnaggtggctctgtg
gaaggggatagctgtttctacaaccaggactaccaggactatgagccccaccatgaacca
cctgcctatgagcagagctccatgcagggtggaaacccccacccccacaatctggccaac
cacccactgccgcctcctccacaaccacagccacataacccccatcccctccctccaccc
cagccccaccctgtaaacaacccccaccctcatccaccgtcacacccacaacccagtcgc
acctcacctaggactgtccaccatgcgccccctcccacgaccgccctgactgggcctgta
cagggccagatgcagcctgctgcccagcgccgactgcccaatggctaccgttcttcatca
ccttccacacatctacatggacccccacatactgggcctcacaaggtcccccctccagct
gggcatcctaggggtccccgcaagggcctgcatgaaccctacagcgagacggaggatgac
gactggtgctag
DBGET
integrated database retrieval system
