KEGG   Micropterus salmoides (largemouth bass): 119888138
Entry
119888138         CDS       T07309                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119888138 (rnf4)
Enzymes [BR:msam01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119888138 (rnf4)
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119888138 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf_RING_Vps8 zf-RING_4 zf-rbx1 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 Rtf2 zf-UDP zf-RING_11 IBR_1 zf-RING_16 zf-RING_10 zf-RING_6
Other DBs
NCBI-GeneID: 119888138
NCBI-ProteinID: XP_038554522
LinkDB
Position
Unknown
AA seq 241 aa
MLTDAHSVVTGVRSCFPETWVSSVSAMSSSTQRKRRITGSPLVSRPKSSRGANARRTASA
NRAANRTANRTANRTANISRASDGNPAPRTETIAVMDNTEDSVEEVVDLTCEGSEAAVVD
LTNNDSVLLVDEGPQNRGGVTTGESYVVSSDDDEDTPPVLNAALMSSLHANSSSRSTPGT
ISCPVCLDSYSEIVESGRLVVSTKCGHVFCSQCLRDSLTSSHTCPTCRKRLTHRQYHPLY
I
NT seq 726 nt   +upstreamnt  +downstreamnt
atgctaactgacgctcactctgttgttaccggtgtcagatcctgttttcccgaaacttgg
gtctccagcgtctctgctatgagcagctctactcagaggaagaggaggatcacaggaagt
cctctagtttccagacccaagagcagcagaggagctaatgctaggaggacagctagcgct
aacagggcagctaacaggacggctaacaggacggctaacaggacggctaacattagcagg
gcgtcagatggtaaccctgccccccgcacagagaccatcgctgtgatggacaacactgag
gacagtgtggaggaggtggtggatctgacctgtgagggatcagaagctgctgtggtcgac
ctgaccaacaacgactcagtactgctggtggacgaaggtcctcagaacaggggcggggtc
accacaggagagagttacgtcgtcagcagtgatgacgacgaggacacgccccctgtcctc
aacgctgcactaatgtcctctctacacgccaacagctcctccaggtcgaccccggggacg
atcagctgtcccgtctgtctggactcgtactctgagatcgtcgagagcggccgattggtt
gtttccactaaatgtggccacgtgttctgcagccagtgtcttagggactctctgacatca
tcacacacctgtcctacctgcaggaagagactgacccaccgccagtaccaccccctctac
atctga

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