Micropterus salmoides (largemouth bass): 119888180
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Entry
119888180 CDS
T07309
Symbol
clcf1
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein clcf1
KO
K05421
cardiotrophin-like cytokine factor 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119888180 (clcf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
msam04052
]
119888180 (clcf1)
Cytokines and neuropeptides [BR:
msam04052
]
Cytokines
CSF and other factors
119888180 (clcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNTF
Motif
Other DBs
NCBI-GeneID:
119888180
NCBI-ProteinID:
XP_038554585
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MKRCCGVHQQQLVLLLAAAMATALDPSHNLASERSSIESTYELTKYLEYQLKEIKTYMXL
TYLGPPFNEKDFSPPRPNSTALSLPSAATRLELWHGLENQARLAQNQKAYSVLLAAVREL
ARSTLCPSLKTSLLHFCTGLDGLLGSISALMTTLGYALPPPSANLGVSTGELQYPQRGAG
VDRPAPLMSQSLYRSRAGTRTESGQRTNQRRSGTRVVGGEREDGVTVDLVEKRRGKEGRR
AEATAAGGRIGGSREKGRGERGRRGRREEPESRKWTASEEERVGEDEEEELEREGGVERW
GRRRRLLSINEDGEEMDRQPEPRVDVSYPGTEGSLRQQTIQTNANNQYSYNLNSLQPDTL
RKEDGFIVERSRVLLMEEEKQIDMEATSSSSTFHHQRRPPRSLLPPTLQPPLSTLSPLPV
RCGXGAHPPLPTHPFVFTEGHLPPFASSDTAPFPHLLLLFAVVGAADHERLRQKVEGFWI
LRELQSWLWRSAKDFNRLKKRLRG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtgttgtggagtccatcaacagcagctcgtcttgctattggctgctgccatg
gcaacagccctggatccttcacacaacctggccagcgagaggagttcgatagaaagcacg
tacgagctgaccaaatacctggagtatcagctcaaggaaatcaagacatatatgtgactg
acctatcttggccctccattcaacgagaaagacttctcccctccacggcccaacagcacg
gctctgtccctgcccagtgcggccacccgcctggagctgtggcacggcctggagaaccaa
gctcggcttgcccaaaaccagaaggcctactctgtgctgctggcagccgtcagggagttg
gcccgctccaccctctgcccttccctcaagacctccctgctgcacttttgcacaggcctg
gatgggctgctgggctccatatccgcactgatgaccaccctcggttacgcacttcctcct
ccttctgcaaacctgggagttagcactggagagctgcagtaccctcagaggggggctgga
gtcgaccgaccagctccactcatgagccagagcctttacaggtccagagccgggacgagg
acagaatccggtcagcgtaccaaccaaagaagaagcgggacaagggtggttggaggagag
agggaggatggcgtcaccgtagacctggtggagaaaaggagagggaaagagggcaggaga
gcggaggcgaccgccgctggaggaaggattggcggatcgagggagaagggaagaggagaa
agagggaggagagggaggagggaagagccagagagcaggaaatggaccgccagcgaagag
gagagagtaggggaggatgaagaggaggagctggagcgagagggaggggtggagagatgg
gggaggaggagaaggttgttaagtatcaacgaggatggagaggagatggacaggcagcct
gaacccagggtagacgtgtcgtacccgggcacagaaggctcccttcgacaacagaccatc
caaaccaacgccaacaatcagtacagctacaacctgaactcacttcagccagacacactc
agaaaagaagatggatttattgtagagcgaagcagagtgttattaatggaggaggagaag
caaatagacatggaagctacctcttcttcctcgacattccatcatcagcgtcggcctcct
cgctccctcctccccccgacccttcaacctcccctgtctaccctctctcctctaccagtt
cggtgcgggtgaggagcacaccctcctctcccaacccatccctttgtctttacagagggg
cacctccctcctttcgcctcctctgacaccgctcctttcccccacctcctcctcctcttc
gctgttgtcggtgcggccgaccatgaacgacttcgccagaaggtagagggattttggata
ttgcgagagctacagagttggctgtggcgatcggcgaaggactttaaccgcctcaagaag
agactcagaggctga
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