Micropterus salmoides (largemouth bass): 119888182
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Entry
119888182 CDS
T07309
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15
KO
K16499
protocadherin delta 2
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119888182 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Protocadherins
119888182 (si:ch73-233f7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
119888182
NCBI-ProteinID:
XP_038554587
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MDHRLSRGSWVPVTGLVICLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVG
KLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRSYQLSANQH
FILNIQTRNDGSKFAELVLDTPLDREQQKKHEMVLTAFDGGSPERSGTALITITVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFNVDP
YTGEIRVKGVVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSDFLDRET
VSEYNITLTARDLGSPSLSTRKTIVVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
SAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNVTVNVFVLDQNDNAPVIVSPLPRNGTVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLLEKDATRQRLVILVKDNGQPPLS
ATASIVLTVVDSVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDRETISGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISSAAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSTENSWNAQSRSASVNNGATTPN
ELKQPNTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTQMR
GVKDYKMSPSTSGVPSRPWTPRCTPPPQQQQPSIPSHPHPHPPPDYHHNVYIPGTPSGFC
TLRPTVQRSELDVHNSFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagactctccagaggcagctgggtaccggtgactgggctggttatatgtctg
cttctgtgtgcgtgtgtagtggacctggttcttgcgcaaattcggtactccattccggaa
gagctggagcacggagcttttgtgggcaacatcgccgaagatctgggcttggatgtgggc
aagctgtcagcccgtcggtttcgtatagtctccggcgcaaagaagcagtatttagaagtg
aacttggagaacggcattcttttcgtcaacgaaaagatagacagagaggagctgtgtgaa
cgaagccccagctgctttttacacctacaagtggtaattgaaaacccattagaactgtat
agagtggaagtggagattttagatgtgaatgacaactcccccagtttcccatggagcgag
tttaatcttgacatcacagagtcggctgcgccgggctcctgttttccgttagagagcgca
caggaccaggacgtgggcaccaactctctgcgctcctaccagctaagcgcaaaccagcac
ttcatactaaacatccagacgcgcaacgatggaagcaagtttgccgagctcgtgctggac
accccactggatcgtgaacagcagaaaaagcacgaaatggttctgactgcctttgacgga
gggtcaccggaacgctctgggacagcactaataactattacagtgttagacgcaaacgat
aacgtgccagtatttgaccgctcagtttaccgggcgagcctggtggagaacgcaccgagg
gggacgctggtgctgaagctgaatgccacagacttggatgagggctcgaatggggaggtg
acctacgcatttagcggtcacgctcccctgaaggtgcgcgaactgttcaacgtggacccc
tacacgggtgaaattcgagtgaagggcgttgtggactacgagaaagccagtgtatatgag
ctgtatgtgcaggcaaaagacaggggaccctcggctgtggcagtgcacagtaaagtgcta
gtagacatcctggatgtgaatgacaacgcgcccgaagtcatcctcacatcagtgtccact
cccgtccaggaagatgcgccacccggcacggtgatagctgttatcagtgtcatggatcgg
gactccggagagaacgggaacgttgactgtcaaattccgagcaacgtcccctttcagctc
cattcatcttttaaaaactattatactctggtgacaagcgactttctggacagggaaacg
gtgtccgagtacaacatcactctcacagcccgagacctgggctctccatcgctctccacc
aggaaaacaatcgtagttcaagtgtctgacattaacgacaaccccccgcggttctcacaa
ccttcatacacagtgtatgtgaccgagaataacgcccccggcgcttccatttgctctgtt
tctgcatttgaccctgattctaaccagaacgcctatctgtcttattctattctcgagggt
cagatccagggcatgcccgtgtccacctatgtctcaatcaactctgacaacggcaacatc
tacgcactgcgctcttttgattatgagcagcttagaaactttcagattctggttcaggcg
caagacgctggtttcccccctctcgcaagtaatgtcacagtcaacgtctttgtcttagac
cagaatgacaatgcccctgttattgtatccccgctacccagaaacggcaccgtggccaca
gaggtggttccgcggtcagtagacgctgggtatctggttaccaaaataacagcgttagac
gcggacgcggggcaaaactcccgactgtcctatcaggtgttgcaggctacagacccgggg
ctgttcagtgtggccctgtacacgggcgaaatcaggactattcgccggctattggaaaaa
gacgcaacaaggcaaagactggtaatattagtcaaggacaacgggcagccgccgctctcc
gccaccgcctctattgtcctcacagtggtagacagcgtgcccgagtccctgtcagatttc
ggagacctcacactcagcccacagcccccctcaaacctcgctctttacttgatcgtgtca
ctgagcacaatatctttaatattcctggtggctataatcgtgctggctgcggtcaagtgc
tacaaggacagggagaccatcagcgggtacaacctccccccgttcgcctgctgctgttgc
ggggggtttcagcccgagccgcccccagaggtgttcaaaaaatcgaacctcaacctgcag
atttcatccgcggccaaagtgcccacgaactgtatggaggtgaatggaaacagcagtctc
tcccagtcgtattgttacaaagtgtgcctgactccggaatctgccaaaagtgactttatg
tttctgaagccgtgcagccccggcagcacaccgaggaacaacgaggcgaagagcacagaa
aactcgtggaacgcgcaaagccggagcgcatctgtgaacaacggagcaactactcccaat
gagctgaagcagccaaatacagactggactcttacaaagaatcagaactcctccattaaa
agttataactctatcaacatggatggcaccctcatgcgtaaggctatgcacgcagaccca
gaaaactatgtcacctccatggcccctggacaatactggacctggggtactcagatgaga
ggcgtgaaagattacaagatgtctccttcaaccagtggggttccctctcgcccctggact
cctcggtgcacacctcctccccagcagcagcagccatcaatcccctcccaccctcaccca
caccccccacctgactaccaccacaatgtgtacatcccagggacaccatcaggcttttgc
accctgaggcccacagtacagcgaagtgagctggacgtccacaattccttctccaccttt
ggcaagaagcgacgtcttcagatgtccccccagggagaggctgccattataaataatgac
ctgtacaatgactga
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