Micropterus salmoides (largemouth bass): 119888259
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Entry
119888259 CDS
T07309
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119888259
09122 Translation
03013 Nucleocytoplasmic transport
119888259
03015 mRNA surveillance pathway
119888259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119888259
03041 Spliceosome [BR:
msam03041
]
119888259
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
119888259
Spliceosome [BR:
msam03041
]
Common components
Common spliceosomal components
Cap binding complex
119888259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
RRN3
DUF1690
Importin_rep_6
Vfa1
DUF2524
AAA_11
CC_BshC
FapA
PHM7_cyt
OmpH
Exonuc_VII_L
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
119888259
NCBI-ProteinID:
XP_038554678
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSRRRHSDESDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCCVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAIYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKGRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHAIIKTHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPCPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRLINWFSHH
LSNFQFRWSWDDWSDCLTVDLDKPKPKFVKEVLEKCMRLSYHQRIVDIVPPTFSALIPAE
PIFIYKYQDESSSSLPGHPVSITVGNAIKNRATNEEILTILKDVPNPNQEDDDDEGESFN
PLKIDVFLQTLLHLAAKSFSHSFSALGKFHEILKTLTESDEGKLHILKVVYDAWRNHPQM
ISVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFIWEILHSTIRKMDKHVQKIQQELE
EAKDKLEKQQHKRKDSGDDEDMDKASEDEEGQLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQIFLMHHVTIQQYMGTLENLLFTAELD
PHILAVYQQFCALQL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggagacggcacagcgacgagagtgacggaggtcaggcccacaaaaggaggaga
acatcagagcccattgaaattgaagaccgcctggagtcactgatatgtcgtgtaggggag
aagagtacatcatcgctggagagcaacttggagggccttgcgggcgtgttggaggctgac
cttccaaactacaaaaacaaaatcctgcgcattttgtgttgtgtcgcccgtctcctacct
gagaagctgactgtgtatacgactttagttggcctcctgaatgccaggaactacaacttt
ggaggtgaatttgtggaggccatgataaggcaactcaaggagacgttgaaaaacaacttg
tacaatgaagctatttacttggtgcgttttctgtctgacttggtcaactgccatgtgatt
gctgcaccatcgatggtggccatgttcgaaaactttgtcagtgttactcaagaggaagat
gtaccacaggttcggtcagactggtttgtgtatgtggtgctgtcctgtctgccctgggtt
gggaaggagctttacgagaagaaggatgttgagatggaccgacttctcagccagatcgaa
ggctaccttaaggggcgagtaaagacgcatgtccccatgctgcaggtgtggactgcagag
aagccccacccacaagaggagtacctggactgcctttgggcccagattcagaagctaaag
aaagaccgctggcaggagcgccacattctacgtccatacattgcctttgacagcgtgctg
tgtgaggccctgcaacacaaccttccccccttcaccccaccgggccatatgccagacgcc
cagtaccccatgccccgggtcgtcttccgcatgttcgactacaccgacgccccagagggt
ccagttatgcctggtagccattctgtggagagatttgtcattgaagaaaacctgcatgct
atcatcaagactcactggagagagaggaaaacatgcgctgcccagttacttagctatccg
gggaaaaataagattccactcaactatcacattgtggaggtgatctttggagaacttttc
cagctgccctgtcctcctcacatcgacgtcatgtacaccacactgctcattgagctctgc
aaactgcagccgggatcattaccacaagttttggcccaagccacagagatgctgtacatg
agactggacaccatgaacaccacctgcatagacagactaatcaactggttttctcatcat
ttgagcaacttccagtttcgatggagctgggatgactggtctgactgcttgaccgtggat
ctagacaagcccaagcccaagtttgtcaaagaggttctggagaagtgcatgagactttcg
taccatcagcggattgtggacatcgtccctccaaccttctcagctctcatcccagctgaa
cccatctttatttacaaataccaagatgagagctcttcttcgctaccaggtcacccagta
tccatcactgtcggaaacgccatcaagaaccgcgcgaccaatgaagagatcctgaccatc
ctcaaagatgtgcccaaccccaaccaagaagatgatgatgatgagggggaaagcttcaac
cccctgaagatcgacgtgttcctgcagactcttctccatctggcagccaaatccttcagc
cactccttcagtgctcttggcaagttccatgaaatcttgaagaccctgacagaaagcgat
gaggggaagctgcacatcctcaaggtggtttatgacgcgtggaggaatcacccacagatg
atctcagtgttggtggacaaaatgattcggacacagatcgtggactgcgctgctgtggca
aactggctcttctctcaggatatggctcacgagttcaccagacttttcatctgggagatt
ctgcactcgactatccggaagatggacaaacacgtccagaagatccagcaggagttggag
gaggccaaggacaaactggagaaacagcagcataagaggaaggacagcggtgacgacgag
gacatggacaaggccagcgaagatgaggagggtcagttggaggagcagatcgagaggcta
caggagaaggtggagtctgctcagagcgaacagaagaacctcttcctcgtcatcttccag
cgtttcatcatgttgttgacggagcatctggttcgctgtgagacaggcagcgtggacatc
agcacgccatggtacaaaaactgcatcgagcggctgcagcagatcttcctcatgcaccat
gtgaccatccagcagtacatgggaaccttggagaacctgctgttcaccgcagagctcgac
ccccacatcctggccgtttatcagcagttctgtgccctccaactttga
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integrated database retrieval system
