KEGG   Micropterus salmoides (largemouth bass): 119888303
Entry
119888303         CDS       T07309                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119888303 (rlim)
Enzymes [BR:msam01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119888303 (rlim)
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119888303 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 PT zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 119888303
NCBI-ProteinID: XP_038554740
LinkDB
Position
Unknown
AA seq 768 aa
MEGSDSLEQSGSDQPESQRRRQLDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNTPSTESGQDPVEPPESSDDPPSGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPSEEPSEQPLGQP
SEQPLGQPLEQPLGQPLERSLEQPVERSLEQPVERSLEQPVEQPVEQPVERPLEQPVERP
LEQPVERPVEQAMEEHVERHVERPVERPVERPVERPVERPVERPVERPVERPLEESPEGQ
EVVANTEPQVPMETEVVEEPVAEELAVIVEPEPELEEVVSQEILGEPPSPPAALLVQPPL
PPSPRRGQRRARSRSPEPRRTRARTARSRSPLNLDQLDGLPNLRHVHSLQGPNSATSAPP
VPQVEGSSRTRQHVLSRQSTADNDVQPSRAGAESVPEAPNPGSQEGEVAGVEGGAAGRRP
PTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVR
TYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTP
ADLAETLNNPDVTPAAAPAAADVDEPPVAAGVRARTAETEMEEGLATGPPASGGRARPRP
PISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITE
YAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 2307 nt   +upstreamnt  +downstreamnt
atggaagggtctgacagtttagaacagagtggcagtgaccagccagagtcacagcgcaga
aggcaactggaccgcctgggcagggaggaggctttctaccagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatcttttgggtaccccaggtgaggtaaca
gaggatgagctgtttagtagacttcagcaaatcaaagatggtccagaacaacagaataac
accccgagtactgaaagtggacaggatccagttgaaccaccggaaagctctgatgatcct
cccagtggggatagtctcttggactggctgaacacagtgaggcgcacaggcaacacaact
agaactggtcatcggggcaaccagtcatggcgggccgtaagccagaccaacccaaatagt
ggcgattttcgcttcagcctggaaatcagtgtgaatcgcaacttggctgaacagcaggca
gctgctgaaggggagcaggagccatcagaggagccttcggagcagcctctgggccagcct
tcggagcagcctctgggccagcctctggagcagcctctgggccagcctctggagcggtct
ttggagcagccagtggagcggtctttggagcagccagtggagcggtctttggagcagcca
gtggagcagccagtggagcagccagtggagcggcctttggagcagccagtggagcggcct
ttggagcagccagtggagcggcctgtggagcaggctatggaggagcatgtggagcggcat
gtggagcggcctgtggagcggcctgtggagcggcctgtggagcggcctgtggagcggcct
gtggagcggccagtggagcggcctgtggagcggcctctggaggagtctccggaaggccaa
gaagtggtggcaaacactgaaccacaggtcccaatggagacagaagtggtggaagaacca
gttgcagaggagttggctgtcatagtggaaccagagcctgaactggaagaggtcgtttca
caagagattttaggagaacctcccagcccacctgctgccctgctggtacaacccccactt
cctccttctccacgcagaggacaaaggagagcccgcagccgcagtccagaaccacgcagg
acaagggcccggacagccaggagccgctcccctctcaacttggatcagctggatggtctg
cctaatctacgtcatgtccacagcttgcaaggcccgaactctgccaccagtgctccccct
gtgcctcaagtggagggcagttctcggactcgacaacatgttctttccaggcaaagcact
gctgacaatgatgttcagccatctagggctggtgcagaatctgtcccggaggccccaaac
cctggatctcaggaaggagaagttgctggggtggaagggggtgctgcagggcgccgtccc
ccaactattatgcttgatctacaagtgcgtcgcgtgcgtccaggcgaatatcgccaaaga
gacagcattgctagccgtacccgctcgcgctcccagaactcaaacaacacatttctttat
gagagcgagcgtggtggatttcgtaggactttctctcgctctgagcgtgctggtgtgagg
acctatgtcagcacaattcgcatccctatccgaagaatctctgatgcaggtttgggagag
gctacatcaatggctcttcaatctatgattcggcagattatgactggttttggtgaactt
ggctacctcatggattcagactctgattcttcagattcaaaccgtggagccaacacacct
gcggatctggctgaaacactcaacaacccagatgttactcctgctgctgctcctgctgct
gctgatgttgatgaaccacctgtggcagctggagtcagagcaaggacagctgagactgaa
atggaagagggccttgccactggtccaccggcctctggtggcagggctagacctagacca
cctattagcctagaggagcccagctcactgcccttcctgcggcttgcccacttcttcctc
ctaaatgatgatgacgaggatcagccccaagggctgaccaaagagcagattgacaacctc
tctatgcgcaattttggtgaaagcgatgcactgaagacttgcagtgtctgtataacagag
tatgcagaaggtaacaagctacgtaagctgccctgctctcacgagtaccatgtgcactgc
atcgatcgctggctgtctgaaaactccacttgtcccatctgccgcagagctgtcctggta
tcggccaaccgagagagcgtggtgtag

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