KEGG   Micropterus salmoides (largemouth bass): 119888308
Entry
119888308         CDS       T07309                                 
Name
(RefSeq) transportin-2-like isoform X1
  KO
K18727  transportin-2
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    119888308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119888308
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     119888308
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_GCN1 HEAT_2 TPR_IMB1 TOR1L1_N IBN_N HEAT_EF3_N Arm Vac14_Fab1_bd TPR_IPO5 HEAT_MROH2B_C Cnd1 TPR_DNAAF5 PDS5 Adaptin_N MMS19_C Ltn1_1st Dopey_N INTS7_N UNC45-central RTP1_C1 TPR_TTI1_C CandA_N PIK3R4-like_middle Caerin_1
Other DBs
NCBI-GeneID: 119888308
NCBI-ProteinID: XP_038554750
LinkDB
Position
Unknown
AA seq 900 aa
MEWQPDEQGLQQVLQLLKDSQSPNTVTQRAVQQKLEQLNQFPDFNNYLIFVLTRLKTEDE
PTRSLSGLILKNNVKAHYQNFPPTVADFIKQECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSEDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALAADEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEMLSGHLVQLTP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSDQDIKPRFHKSRTVTLQHEGGEGEEDEDIED
DDDDDDDTLSDWNLRKCSAAALDVLANVFRDDLLPHLLPLLKGLLFHPDWVIKESGILVL
GAIAEGCMQGMVPYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDSYLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYNQHPDQYEAPDKDFMIVALDLLSGLAEGLGGHVEQ
LVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFPHVKPCIAEFMPILGLNLNPEF
ISVCNNATWAIGEISMQMGTSVKQQTSNPGAEMQPYVGMVLPHLVEIINRPNTPKTLLEN
TAITIGRLGYVCPQEVAPQLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPAGVVQ
DFIFFCDAVASWVNPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKERLSACYGV
NT seq 2703 nt   +upstreamnt  +downstreamnt
atggagtggcagccagatgagcagggacttcagcaggtcctccaactgctcaaagactca
cagtcacccaacacagtcacgcagagagctgtccaacaaaaacttgaacaactcaaccag
ttccctgacttcaacaactatctcatctttgtcctcacacggctcaaaactgaagacgag
ccaactcgctctctgagcggtctgatactgaagaacaatgttaaggcccactaccagaac
ttccccccaactgttgctgacttcatcaagcaggaatgtctcaacaacatcggtgatccc
tcaccactcatccgtgccaccattggcatcctgatcaccaccattgcctccaagggagag
ctacaaacatggcccgagctgctgccccagctctgcaatttgctcaactcggaagactac
aacacctgcgagggctcgtttggagcactgcagaagatctgcgaggactcgtcggagctg
ctggacagcgacgctctgaacagacccctcaacattatgatacccaaattccttcagttc
ttcaaacactgcagccccaagattaggtcccatgccatagcctgtgtgaatcagttcatc
attggcagagcccaggcactaatggacaacattgacaccttcatagagagcctgtttgcg
ctggcagcagatgaggactctgaggttcgaaagaatgtgtgccgagcactggtcatgtta
ctggaggtccggattgaccgcctcattccccacatgcacagcatcatccagtacatgctt
cagagaacacaggaccctgatgagaacgtggctctggaggcctgtgagttttggttgact
ttagcagagcagcccatctgtaaggagatgctgtctggacacctggtgcaactgacacct
atcttggtaaatgggatgaagtattcagagattgacatcatactattaaagggtgatgtg
gaggaggatgaggcagtgccagatagtgatcaggacatcaagcctcgtttccacaagtcg
cgcactgtcaccttgcagcacgaaggaggggagggcgaggaggatgaggacatagaagac
gacgacgacgacgatgacgacacgctgtctgactggaacctgcgaaagtgttcagccgca
gcactggatgttctggccaacgtgttccgtgacgatctgctgccccacctcctgccgctc
ctgaaaggactgctcttccaccctgactgggtcatcaaggagtctggcatcctggtgttg
ggggccatagctgagggctgcatgcagggcatggtgccctacctgccggagctgatcccc
cacctcatccagtgtctctgtgacaaaaaggccctggtgcgctcaattgcctgctggacc
ctgagtcgctatgcacattgggtggtgtcccagcccccagactcctacctcaaacccctt
atgacagagctccttaaacgcatcctggacggcaacaagagggtgcaggaggcggcctgc
agtgcgtttgcaaccctggaggaggaggcgtgcacagagctggtgccctacctgagtttt
attctggacacactggtgtttgctttcgggaagtaccagcacaagaatctcctcattctc
tacgatgctataggaactctagcagactcagttggtcatcacctcaatcaacctgagtac
attcagaagttgatgcccccccttattgccaagtggaatgagctgaaggacgaagacaag
gatctcttccctctactagagtgtctgtcgtctgtagccaccgccctgcagagtgggttt
ctaccttactgtgagcctgtctatcagcgctgtgttacactagtccagaagacactagct
caagctatgatgtacaaccaacacccagaccagtatgaggctcctgacaaagatttcatg
attgtggctttggatctgctgagtggcctggctgagggtttggggggtcatgtagaacag
ctagtggcccgatctaacatcatgaccctgcttttccagtgcatgcaggatactatgcct
gaggtgaggcaaagctcttttgctcttttgggtgatctaaccaaggcgtgctttccacat
gttaagccctgcattgctgagttcatgcccatcctggggctcaacctgaacccagagttt
atctcagtgtgtaacaacgctacctgggccattggagagatctccatgcaaatgggcaca
agtgtcaagcagcaaacaagcaatcctggtgcagagatgcagccatatgtgggaatggtt
ctgccacacctggtggagatcatcaatagacccaacacacccaagactctgctggaaaac
acagccattactattggcagactgggttacgtctgtccccaggaagtggccccacagctg
cagcaattcattagaccatggtgcacatcattgaggaatatcagagataacgaggagaag
gattcagccttccggggaatctgtgtgatgatcggcgtgaaccctgcaggggtggtgcag
gacttcattttcttctgtgatgctgtggcctcctgggtcaaccccaaggatgacctgaga
gacatgttttataagatcttgcatggcttcaaggaccaggtcggtgaagagaactggcag
cagttctcagagcagtttcctcctctgttgaaggaacgcctgtctgcctgctacggcgtc
taa

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