Micropterus salmoides (largemouth bass): 119888334
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Entry
119888334 CDS
T07309
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msam03016
]
119888334 (trmt13)
Enzymes [BR:
msam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
119888334 (trmt13)
Transfer RNA biogenesis [BR:
msam03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119888334 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
119888334
NCBI-ProteinID:
XP_038554793
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MAAPLPGRCGFFVQKKKRFCKMIVGKGKLFCGEHATMEEGSGRRIACPLDPKHTVSEDKL
DKHLKKCNSREKPRPVYFVEDINSGPADGEQTLQQVSLAACSRAQLETLVDKLKAAVAGL
CCDVEDRVLSHPVLQEELNNPKNGDSAHKHLKQQSSILGHLEALRLLGRGRCFVEFGAGR
GKLSHWIHEALKTRDRLQTCDDLQLLLVERCSTRFKVDGKHQEVGVEFERLQVDIQHLDL
SRVPLLRPKKLPLVGVGKHLCGAATDLALRCLLETPRPRKETGPPPKRLKTSEPDGNSGP
ADSAALPDPGPGADSGPGPILGLAVALCCHHRCEWRHYVGQQFFLQRGLGAREFSAFCRM
SSWATCGLRPTNQDRPPQDPTNQRGDDEEHEPAEETDAVTGFLSAAEREQLGRLCKRLID
SGRLDFLKKKGFDGRLSAYVKSQVTLENVLLTAVPSSPS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccctgccgggcagatgcggcttcttcgtgcagaaaaagaaacgtttctgt
aaaatgatcgtcgggaaaggaaagctgttctgcggagagcacgcgaccatggaggaaggg
agcggcaggaggatcgcgtgtcctctggaccccaaacacaccgtgagtgaagacaaactg
gacaaacacctgaagaagtgtaactccagagagaaacccagacctgtttatttcgtggag
gacataaactctggaccagctgacggagaacagacgctccaacaggtgagtctggcggcg
tgcagccgggcgcagctcgagactctagtggacaaactgaaggcggcggttgcaggtctg
tgctgtgatgtggaggacagagttttgtctcaccccgtcctccaggaggaactcaacaac
ccgaagaacggagactccgcccacaaacacctgaagcaacagtcctctatcctaggtcac
ctggaggcgctgaggctgctgggaagggggcggtgtttcgtggagttcggagcaggtcga
gggaagctgtctcactggatccacgaagccctgaagacccgggaccgcctgcagacctgc
gacgacctgcagctgctgctggtggagcgctgcagcacccgcttcaaggtggacgggaaa
caccaggaggttggagttgagtttgagaggctgcaggtcgacattcagcatctggattta
agtcgggtccctctgctcagaccgaagaagctcccgttggttggagtcgggaaacacctg
tgtggagcggccacagatttggctctgcgctgtttgttggaaacacctagacccagaaag
gagaccggaccgcccccaaaacgcctcaaaacctcagaaccagacgggaattcaggacca
gctgattcagcagcactgccagaccctggtcccggtgcagactctggtcctggtccgata
ctgggcctggcggtggcactgtgctgccaccatcgctgtgagtggcgtcactacgtgggt
cagcagttcttcctacagcgaggactcggagctagagagttctccgctttctgtcggatg
tccagctgggccacatgtggactcaggccgaccaatcaggaccgtccgcctcaggatccg
accaatcagagaggagatgacgaagagcacgaaccagcagaggagacggatgctgtgacc
gggttcctgtcggcagctgaacgcgagcagctgggtcgtctctgtaagcgtctgattgac
agcggcagactggacttcctgaagaagaaagggtttgacggtagactgagcgcctacgtg
aagtctcaggtgactctggagaacgtcctgctgaccgccgtcccctcgtctccgtcctga
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